RNA–Protein interactions for RNA: ENST00000510024.5

SEMA6A-209, Transcript of semaphorin 6A, humanhuman

TSL 3

Gene SEMA6A, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-209ENST00000510024 SCUBE3Q8IX30 993 aa9.86□□□□□ -0.83
SEMA6A-209ENST00000510024 SPDYE5A6NIY4 337 aa9.85□□□□□ -0.83
SEMA6A-209ENST00000510024 MTMR2Q13614 643 aa9.85□□□□□ -0.83
SEMA6A-209ENST00000510024 THAP11Q96EK4 314 aa9.85□□□□□ -0.83
SEMA6A-209ENST00000510024 RFC5P40937 340 aa9.84□□□□□ -0.83
SEMA6A-209ENST00000510024 CSPP1Q1MSJ5 1256 aa9.84□□□□□ -0.83
SEMA6A-209ENST00000510024 TJAP1Q5JTD0 557 aa9.84□□□□□ -0.83
SEMA6A-209ENST00000510024 BRICD5Q6PL45 260 aa9.84□□□□□ -0.83
SEMA6A-209ENST00000510024 CABLES1Q8TDN4 633 aa9.84□□□□□ -0.83
SEMA6A-209ENST00000510024 RTL5Q5HYW3 569 aaPredicted RBP9.83□□□□□ -0.84
SEMA6A-209ENST00000510024 MTRQ99707 1265 aa9.83□□□□□ -0.84
SEMA6A-209ENST00000510024 RNF19BQ6ZMZ0 732 aa9.82□□□□□ -0.84
SEMA6A-209ENST00000510024 RETREG3Q86VR2 466 aa9.82□□□□□ -0.84
SEMA6A-209ENST00000510024 ATP1B4Q9UN42 357 aaPredicted RBP9.82□□□□□ -0.84
SEMA6A-209ENST00000510024 C6orf229H3BNL8 230 aa9.81□□□□□ -0.84
SEMA6A-209ENST00000510024 COPS2P61201 443 aa9.81□□□□□ -0.84
SEMA6A-209ENST00000510024 SYMPKQ92797 1274 aaKnown RBP9.81□□□□□ -0.84
SEMA6A-209ENST00000510024 IL21Q9HBE4 155 aa9.81□□□□□ -0.84
SEMA6A-209ENST00000510024 NUTM2BA6NNL0 878 aaPredicted RBP9.8□□□□□ -0.84
SEMA6A-209ENST00000510024 NUTM2EB1AL46 878 aaPredicted RBP9.8□□□□□ -0.84
SEMA6A-209ENST00000510024 ZPR1O75312 459 aa9.8□□□□□ -0.84
SEMA6A-209ENST00000510024 FMNL1O95466 1100 aaPredicted RBP9.8□□□□□ -0.84
SEMA6A-209ENST00000510024 TMEM259Q4ZIN3 620 aa9.8□□□□□ -0.84
SEMA6A-209ENST00000510024 NUTM2DQ5VT03 806 aaPredicted RBP9.8□□□□□ -0.84
SEMA6A-209ENST00000510024 NUTM2AQ8IVF1 878 aaPredicted RBP9.8□□□□□ -0.84
SEMA6A-209ENST00000510024 BANK1Q8NDB2 785 aa9.79□□□□□ -0.84
SEMA6A-209ENST00000510024 USB1Q9BQ65 265 aaKnown RBP9.79□□□□□ -0.84
SEMA6A-209ENST00000510024 CFAP99D6REC4 459 aa9.78□□□□□ -0.84
SEMA6A-209ENST00000510024 ITGBL1O95965 494 aaPredicted RBP9.78□□□□□ -0.84
SEMA6A-209ENST00000510024 DESI1Q6ICB0 168 aa9.78□□□□□ -0.84
SEMA6A-209ENST00000510024 PRR7Q8TB68 274 aa9.77□□□□□ -0.85
SEMA6A-209ENST00000510024 SOCS7O14512 581 aa9.76□□□□□ -0.85
SEMA6A-209ENST00000510024 FLIIQ13045 1269 aa9.76□□□□□ -0.85
SEMA6A-209ENST00000510024 MSS51Q4VC12 460 aa9.76□□□□□ -0.85
SEMA6A-209ENST00000510024 ZNF516Q92618 1163 aa9.76□□□□□ -0.85
SEMA6A-209ENST00000510024 SPSB2Q99619 263 aa9.76□□□□□ -0.85
SEMA6A-209ENST00000510024 ADH1BP00325 375 aa9.75□□□□□ -0.85
SEMA6A-209ENST00000510024 FAM160A2Q8N612 972 aaPredicted RBP9.75□□□□□ -0.85
SEMA6A-209ENST00000510024 TLL1O43897 1013 aa9.74□□□□□ -0.85
SEMA6A-209ENST00000510024 MCM6Q14566 821 aa9.74□□□□□ -0.85
SEMA6A-209ENST00000510024 HELBQ8NG08 1087 aaPredicted RBP9.74□□□□□ -0.85
SEMA6A-209ENST00000510024 AP1G2O75843 785 aa9.73□□□□□ -0.85
SEMA6A-209ENST00000510024 USP17L8P0C7I0 530 aa9.72□□□□□ -0.85
SEMA6A-209ENST00000510024 MMP16P51512 607 aa9.72□□□□□ -0.85
SEMA6A-209ENST00000510024 KCNC4Q03721 635 aa9.72□□□□□ -0.85
SEMA6A-209ENST00000510024 CTDSPL2Q05D32 466 aa9.72□□□□□ -0.85
SEMA6A-209ENST00000510024 DXOO77932 396 aaKnown RBP9.71□□□□□ -0.86
SEMA6A-209ENST00000510024 JUNDP17535 347 aa9.71□□□□□ -0.86
SEMA6A-209ENST00000510024 ERICH6Q7L0X2 663 aa9.71□□□□□ -0.86
SEMA6A-209ENST00000510024 LYPD8Q6UX82 237 aa9.7□□□□□ -0.86
SEMA6A-209ENST00000510024 NKX2-3Q8TAU0 364 aa9.7□□□□□ -0.86
SEMA6A-209ENST00000510024 SNRKQ9NRH2 765 aa9.7□□□□□ -0.86
SEMA6A-209ENST00000510024 MTMR14Q8NCE2 650 aa9.69□□□□□ -0.86
SEMA6A-209ENST00000510024 PER1O15534 1290 aaPredicted RBP9.68□□□□□ -0.86
SEMA6A-209ENST00000510024 IFFO2Q5TF58 517 aa9.68□□□□□ -0.86
SEMA6A-209ENST00000510024 SLC6A16Q9GZN6 736 aa9.68□□□□□ -0.86
SEMA6A-209ENST00000510024 PRDM9Q9NQV7 894 aa9.68□□□□□ -0.86
SEMA6A-209ENST00000510024 PTPRNQ16849 979 aa9.67□□□□□ -0.86
SEMA6A-209ENST00000510024 TSC1Q92574 1164 aa9.67□□□□□ -0.86
SEMA6A-209ENST00000510024 LRRN4Q8WUT4 740 aa9.66□□□□□ -0.86
SEMA6A-209ENST00000510024 GJD4Q96KN9 370 aaPredicted RBP9.66□□□□□ -0.86
SEMA6A-209ENST00000510024 F12P00748 615 aaPredicted RBP9.65□□□□□ -0.86
SEMA6A-209ENST00000510024 HMX1Q9NP08 348 aaPredicted RBP9.65□□□□□ -0.86
SEMA6A-209ENST00000510024 TIMELESSQ9UNS1 1208 aa9.65□□□□□ -0.86
SEMA6A-209ENST00000510024 TRIM34Q9BYJ4 488 aa9.64□□□□□ -0.87
SEMA6A-209ENST00000510024 APBB1O00213 710 aa9.63□□□□□ -0.87
SEMA6A-209ENST00000510024 S1PR4O95977 384 aa9.63□□□□□ -0.87
SEMA6A-209ENST00000510024 CCNYL3P0C7X3 344 aa9.62□□□□□ -0.87
SEMA6A-209ENST00000510024 C14orf37Q86TY3 774 aa9.62□□□□□ -0.87
SEMA6A-209ENST00000510024 NUDT12Q9BQG2 462 aa9.62□□□□□ -0.87
SEMA6A-209ENST00000510024 EVA1BQ9NVM1 165 aa9.62□□□□□ -0.87
SEMA6A-209ENST00000510024 UBTFP17480 764 aaKnown RBP9.6□□□□□ -0.87
SEMA6A-209ENST00000510024 COG6Q9Y2V7 657 aa9.6□□□□□ -0.87
SEMA6A-209ENST00000510024 A6NJR5 290 aa9.59□□□□□ -0.87
SEMA6A-209ENST00000510024 GPR37L1O60883 481 aa9.59□□□□□ -0.87
SEMA6A-209ENST00000510024 RNF223E7ERA6 249 aa9.58□□□□□ -0.88
SEMA6A-209ENST00000510024 GGCXP38435 758 aa9.58□□□□□ -0.88
SEMA6A-209ENST00000510024 KCNH2Q12809 1159 aa9.58□□□□□ -0.88
SEMA6A-209ENST00000510024 EPS8L1Q8TE68 723 aa9.58□□□□□ -0.88
SEMA6A-209ENST00000510024 ZMYND15Q9H091 742 aa9.58□□□□□ -0.88
SEMA6A-209ENST00000510024 MAP10Q9P2G4 905 aa9.58□□□□□ -0.88
SEMA6A-209ENST00000510024 NR6A1Q15406 480 aa9.57□□□□□ -0.88
SEMA6A-209ENST00000510024 PPP1R18Q6NYC8 613 aa9.57□□□□□ -0.88
SEMA6A-209ENST00000510024 ANKLE1Q8NAG6 615 aa9.57□□□□□ -0.88
SEMA6A-209ENST00000510024 POM121Q96HA1 1249 aa9.57□□□□□ -0.88
SEMA6A-209ENST00000510024 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.57□□□□□ -0.88
SEMA6A-209ENST00000510024 FCF1Q9Y324 198 aaKnown RBP9.57□□□□□ -0.88
SEMA6A-209ENST00000510024 NDUFB9Q9Y6M9 179 aa9.57□□□□□ -0.88
SEMA6A-209ENST00000510024 PRM3Q9NNZ6 103 aa9.56□□□□□ -0.88
SEMA6A-209ENST00000510024 TBC1D2BQ9UPU7 963 aa9.56□□□□□ -0.88
SEMA6A-209ENST00000510024 RAD21O60216 631 aa9.55□□□□□ -0.88
SEMA6A-209ENST00000510024 CLUAP1Q96AJ1 413 aa9.55□□□□□ -0.88
SEMA6A-209ENST00000510024 GDPD2Q9HCC8 539 aa9.55□□□□□ -0.88
SEMA6A-209ENST00000510024 PLA2G2EQ9NZK7 142 aa9.55□□□□□ -0.88
SEMA6A-209ENST00000510024 PTCRAQ6ISU1 281 aaPredicted RBP9.54□□□□□ -0.88
SEMA6A-209ENST00000510024 FNBP4Q8N3X1 1017 aaPredicted RBP9.54□□□□□ -0.88
SEMA6A-209ENST00000510024 ZC3H4Q9UPT8 1303 aaKnown RBP9.54□□□□□ -0.88
SEMA6A-209ENST00000510024 PPEF1O14829 653 aaPredicted RBP9.53□□□□□ -0.88
SEMA6A-209ENST00000510024 CTHP32929 405 aa9.53□□□□□ -0.88
SEMA6A-209ENST00000510024 IRF5Q13568 498 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms