RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 KCNC4Q03721 635 aa14.72□□□□□ -0.05
TRAPPC11-206ENST00000509857 PRPF38BQ5VTL8 546 aaKnown RBP14.72□□□□□ -0.05
TRAPPC11-206ENST00000509857 PCDHB15Q9Y5E8 787 aa14.72□□□□□ -0.05
TRAPPC11-206ENST00000509857 IFFO2Q5TF58 517 aa14.71□□□□□ -0.05
TRAPPC11-206ENST00000509857 RNF19BQ6ZMZ0 732 aa14.71□□□□□ -0.05
TRAPPC11-206ENST00000509857 PROCA1Q8NCQ7 364 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC11-206ENST00000509857 PCMTD1Q96MG8 357 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC11-206ENST00000509857 FMNL1O95466 1100 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC11-206ENST00000509857 TLL1O43897 1013 aa14.68□□□□□ -0.06
TRAPPC11-206ENST00000509857 ZBTB3Q9H5J0 574 aa14.68□□□□□ -0.06
TRAPPC11-206ENST00000509857 LILRB3O75022 631 aa14.67□□□□□ -0.06
TRAPPC11-206ENST00000509857 ADH1BP00325 375 aa14.67□□□□□ -0.06
TRAPPC11-206ENST00000509857 MTMR2Q13614 643 aa14.67□□□□□ -0.06
TRAPPC11-206ENST00000509857 QPCTQ16769 361 aa14.67□□□□□ -0.06
TRAPPC11-206ENST00000509857 SPDYE5A6NIY4 337 aa14.66□□□□□ -0.06
TRAPPC11-206ENST00000509857 RETREG3Q86VR2 466 aa14.66□□□□□ -0.06
TRAPPC11-206ENST00000509857 SPSB2Q99619 263 aa14.66□□□□□ -0.06
TRAPPC11-206ENST00000509857 HRCP23327 699 aa14.65□□□□□ -0.06
TRAPPC11-206ENST00000509857 C6orf229H3BNL8 230 aa14.64□□□□□ -0.07
TRAPPC11-206ENST00000509857 CSPP1Q1MSJ5 1256 aa14.64□□□□□ -0.07
TRAPPC11-206ENST00000509857 MSS51Q4VC12 460 aa14.64□□□□□ -0.07
TRAPPC11-206ENST00000509857 PPP2R2DQ66LE6 453 aa14.64□□□□□ -0.07
TRAPPC11-206ENST00000509857 NKX2-3Q8TAU0 364 aa14.64□□□□□ -0.07
TRAPPC11-206ENST00000509857 CABLES1Q8TDN4 633 aa14.64□□□□□ -0.07
TRAPPC11-206ENST00000509857 SYMPKQ92797 1274 aaKnown RBP14.64□□□□□ -0.07
TRAPPC11-206ENST00000509857 USB1Q9BQ65 265 aaKnown RBP14.64□□□□□ -0.07
TRAPPC11-206ENST00000509857 FAM160A2Q8N612 972 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC11-206ENST00000509857 PLA2G2EQ9NZK7 142 aa14.62□□□□□ -0.07
TRAPPC11-206ENST00000509857 FBXO31Q5XUX0 539 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC11-206ENST00000509857 RTL5Q5HYW3 569 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC11-206ENST00000509857 NUTM2BA6NNL0 878 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC11-206ENST00000509857 NUTM2EB1AL46 878 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC11-206ENST00000509857 CFAP99D6REC4 459 aa14.57□□□□□ -0.08
TRAPPC11-206ENST00000509857 NUTM2DQ5VT03 806 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC11-206ENST00000509857 NUTM2AQ8IVF1 878 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC11-206ENST00000509857 PRR7Q8TB68 274 aa14.57□□□□□ -0.08
TRAPPC11-206ENST00000509857 DESI1Q6ICB0 168 aa14.56□□□□□ -0.08
TRAPPC11-206ENST00000509857 SLC6A16Q9GZN6 736 aa14.56□□□□□ -0.08
TRAPPC11-206ENST00000509857 ATP1B4Q9UN42 357 aaPredicted RBP14.56□□□□□ -0.08
TRAPPC11-206ENST00000509857 DXOO77932 396 aaKnown RBP14.55□□□□□ -0.08
TRAPPC11-206ENST00000509857 MMP16P51512 607 aa14.55□□□□□ -0.08
TRAPPC11-206ENST00000509857 PRDM9Q9NQV7 894 aa14.54□□□□□ -0.08
TRAPPC11-206ENST00000509857 S1PR4O95977 384 aa14.53□□□□□ -0.08
TRAPPC11-206ENST00000509857 JUNDP17535 347 aa14.53□□□□□ -0.08
TRAPPC11-206ENST00000509857 RFC5P40937 340 aa14.53□□□□□ -0.08
TRAPPC11-206ENST00000509857 A0A0G2JS52 829 aa14.5□□□□□ -0.09
TRAPPC11-206ENST00000509857 GGCXP38435 758 aa14.49□□□□□ -0.09
TRAPPC11-206ENST00000509857 TMEM259Q4ZIN3 620 aa14.48□□□□□ -0.09
TRAPPC11-206ENST00000509857 PPP1R18Q6NYC8 613 aa14.48□□□□□ -0.09
TRAPPC11-206ENST00000509857 HELBQ8NG08 1087 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC11-206ENST00000509857 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.47□□□□□ -0.09
TRAPPC11-206ENST00000509857 RNF223E7ERA6 249 aa14.45□□□□□ -0.1
TRAPPC11-206ENST00000509857 PTPRNQ16849 979 aa14.45□□□□□ -0.1
TRAPPC11-206ENST00000509857 LYPD8Q6UX82 237 aa14.45□□□□□ -0.1
TRAPPC11-206ENST00000509857 ANKLE1Q8NAG6 615 aa14.44□□□□□ -0.1
TRAPPC11-206ENST00000509857 BANK1Q8NDB2 785 aa14.43□□□□□ -0.1
TRAPPC11-206ENST00000509857 AP1G2O75843 785 aa14.42□□□□□ -0.1
TRAPPC11-206ENST00000509857 CTDSPL2Q05D32 466 aa14.41□□□□□ -0.1
TRAPPC11-206ENST00000509857 TSC1Q92574 1164 aa14.41□□□□□ -0.1
TRAPPC11-206ENST00000509857 PPEF1O14829 653 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC11-206ENST00000509857 PER1O15534 1290 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC11-206ENST00000509857 NUDT12Q9BQG2 462 aa14.4□□□□□ -0.1
TRAPPC11-206ENST00000509857 FCF1Q9Y324 198 aaKnown RBP14.4□□□□□ -0.1
TRAPPC11-206ENST00000509857 USP17L8P0C7I0 530 aa14.39□□□□□ -0.11
TRAPPC11-206ENST00000509857 CCNYL3P0C7X3 344 aa14.39□□□□□ -0.11
TRAPPC11-206ENST00000509857 SOCS7O14512 581 aa14.38□□□□□ -0.11
TRAPPC11-206ENST00000509857 F12P00748 615 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC11-206ENST00000509857 EVA1BQ9NVM1 165 aa14.36□□□□□ -0.11
TRAPPC11-206ENST00000509857 PLA2G2CQ5R387 149 aa14.34□□□□□ -0.11
TRAPPC11-206ENST00000509857 LRRN4Q8WUT4 740 aa14.34□□□□□ -0.11
TRAPPC11-206ENST00000509857 KCNH2Q12809 1159 aa14.32□□□□□ -0.12
TRAPPC11-206ENST00000509857 CCDC24Q8N4L8 307 aa14.3□□□□□ -0.12
TRAPPC11-206ENST00000509857 MTMR14Q8NCE2 650 aa14.3□□□□□ -0.12
TRAPPC11-206ENST00000509857 EMID1Q96A84 441 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC11-206ENST00000509857 HMX1Q9NP08 348 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC11-206ENST00000509857 MCM6Q14566 821 aa14.29□□□□□ -0.12
TRAPPC11-206ENST00000509857 SNRKQ9NRH2 765 aa14.29□□□□□ -0.12
TRAPPC11-206ENST00000509857 MAP10Q9P2G4 905 aa14.29□□□□□ -0.12
TRAPPC11-206ENST00000509857 RPIAP49247 311 aa14.28□□□□□ -0.12
TRAPPC11-206ENST00000509857 PTCRAQ6ISU1 281 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC11-206ENST00000509857 RGS20O76081 388 aa14.27□□□□□ -0.13
TRAPPC11-206ENST00000509857 GJD4Q96KN9 370 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC11-206ENST00000509857 TRIM34Q9BYJ4 488 aa14.27□□□□□ -0.13
TRAPPC11-206ENST00000509857 CTHP32929 405 aa14.26□□□□□ -0.13
TRAPPC11-206ENST00000509857 FLIIQ13045 1269 aa14.26□□□□□ -0.13
TRAPPC11-206ENST00000509857 UNC93B1Q9H1C4 597 aa14.26□□□□□ -0.13
TRAPPC11-206ENST00000509857 LIAT1Q6ZQX7 453 aa14.25□□□□□ -0.13
TRAPPC11-206ENST00000509857 GTF3C3Q9Y5Q9 886 aa14.24□□□□□ -0.13
TRAPPC11-206ENST00000509857 V9GY48 417 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC11-206ENST00000509857 APBB1O00213 710 aa14.23□□□□□ -0.13
TRAPPC11-206ENST00000509857 SLC19A1P41440 591 aa14.22□□□□□ -0.13
TRAPPC11-206ENST00000509857 NR6A1Q15406 480 aa14.22□□□□□ -0.13
TRAPPC11-206ENST00000509857 ZBTB24O43167 697 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC11-206ENST00000509857 TRIM32Q13049 653 aa14.21□□□□□ -0.13
TRAPPC11-206ENST00000509857 EPS8L1Q8TE68 723 aa14.21□□□□□ -0.13
TRAPPC11-206ENST00000509857 PRKD2Q9BZL6 878 aa14.21□□□□□ -0.13
TRAPPC11-206ENST00000509857 ARMC2Q8NEN0 867 aa14.19□□□□□ -0.14
TRAPPC11-206ENST00000509857 ZC3H4Q9UPT8 1303 aaKnown RBP14.18□□□□□ -0.14
TRAPPC11-206ENST00000509857 SPRYD7Q5W111 196 aa14.18□□□□□ -0.14
TRAPPC11-206ENST00000509857 FKBPLQ9UIM3 349 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms