RNA–Protein interactions for RNA: ENST00000509712.5

CCDC30-213, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-213ENST00000509712 PPP4CP60510 307 aa7.68□□□□□ -1.18
CCDC30-213ENST00000509712 KMT5BQ4FZB7 885 aa7.68□□□□□ -1.18
CCDC30-213ENST00000509712 ATP6V1AP38606 617 aa7.67□□□□□ -1.18
CCDC30-213ENST00000509712 APLP1P51693 650 aa7.67□□□□□ -1.18
CCDC30-213ENST00000509712 PTPN5P54829 565 aa7.67□□□□□ -1.18
CCDC30-213ENST00000509712 FLIIQ13045 1269 aa7.67□□□□□ -1.18
CCDC30-213ENST00000509712 MORN1Q5T089 497 aa7.67□□□□□ -1.18
CCDC30-213ENST00000509712 CABLES1Q8TDN4 633 aa7.67□□□□□ -1.18
CCDC30-213ENST00000509712 CSPP1Q1MSJ5 1256 aa7.67□□□□□ -1.18
CCDC30-213ENST00000509712 RTL5Q5HYW3 569 aaPredicted RBP7.67□□□□□ -1.18
CCDC30-213ENST00000509712 ZBTB3Q9H5J0 574 aa7.66□□□□□ -1.18
CCDC30-213ENST00000509712 BANK1Q8NDB2 785 aa7.65□□□□□ -1.18
CCDC30-213ENST00000509712 PRR14Q9BWN1 585 aa7.65□□□□□ -1.18
CCDC30-213ENST00000509712 PUS10Q3MIT2 529 aaKnown RBP7.64□□□□□ -1.19
CCDC30-213ENST00000509712 GRIPAP1Q4V328 841 aa7.64□□□□□ -1.19
CCDC30-213ENST00000509712 SPDYE5A6NIY4 337 aa7.63□□□□□ -1.19
CCDC30-213ENST00000509712 MTMR2Q13614 643 aa7.63□□□□□ -1.19
CCDC30-213ENST00000509712 TMEM259Q4ZIN3 620 aa7.63□□□□□ -1.19
CCDC30-213ENST00000509712 SLC27A5Q9Y2P5 690 aa7.63□□□□□ -1.19
CCDC30-213ENST00000509712 SOCS7O14512 581 aa7.63□□□□□ -1.19
CCDC30-213ENST00000509712 NYAP1Q6ZVC0 841 aa7.63□□□□□ -1.19
CCDC30-213ENST00000509712 CFAP99D6REC4 459 aa7.62□□□□□ -1.19
CCDC30-213ENST00000509712 MTMR14Q8NCE2 650 aa7.62□□□□□ -1.19
CCDC30-213ENST00000509712 SNRKQ9NRH2 765 aa7.62□□□□□ -1.19
CCDC30-213ENST00000509712 ATP1B4Q9UN42 357 aaPredicted RBP7.62□□□□□ -1.19
CCDC30-213ENST00000509712 RNF19BQ6ZMZ0 732 aa7.61□□□□□ -1.19
CCDC30-213ENST00000509712 SYMPKQ92797 1274 aaKnown RBP7.61□□□□□ -1.19
CCDC30-213ENST00000509712 THAP11Q96EK4 314 aa7.61□□□□□ -1.19
CCDC30-213ENST00000509712 ZMYND15Q9H091 742 aa7.61□□□□□ -1.19
CCDC30-213ENST00000509712 BLOC1S3Q6QNY0 202 aa7.6□□□□□ -1.19
CCDC30-213ENST00000509712 SALL2Q9Y467 1007 aaPredicted RBP7.6□□□□□ -1.19
CCDC30-213ENST00000509712 PCDHB3Q9Y5E6 796 aa7.6□□□□□ -1.19
CCDC30-213ENST00000509712 NUTM2BA6NNL0 878 aaPredicted RBP7.59□□□□□ -1.19
CCDC30-213ENST00000509712 NUTM2EB1AL46 878 aaPredicted RBP7.59□□□□□ -1.19
CCDC30-213ENST00000509712 USP17L8P0C7I0 530 aa7.59□□□□□ -1.19
CCDC30-213ENST00000509712 NUTM2DQ5VT03 806 aaPredicted RBP7.59□□□□□ -1.19
CCDC30-213ENST00000509712 NUTM2AQ8IVF1 878 aaPredicted RBP7.59□□□□□ -1.19
CCDC30-213ENST00000509712 C6orf229H3BNL8 230 aa7.59□□□□□ -1.2
CCDC30-213ENST00000509712 BRICD5Q6PL45 260 aa7.59□□□□□ -1.2
CCDC30-213ENST00000509712 RETREG3Q86VR2 466 aa7.59□□□□□ -1.2
CCDC30-213ENST00000509712 AP1G2O75843 785 aa7.58□□□□□ -1.2
CCDC30-213ENST00000509712 Q3C1V9 767 aa7.58□□□□□ -1.2
CCDC30-213ENST00000509712 SCUBE3Q8IX30 993 aa7.58□□□□□ -1.2
CCDC30-213ENST00000509712 UBE2Q2Q8WVN8 375 aa7.58□□□□□ -1.2
CCDC30-213ENST00000509712 CLUAP1Q96AJ1 413 aa7.58□□□□□ -1.2
CCDC30-213ENST00000509712 A6NJR5 290 aa7.57□□□□□ -1.2
CCDC30-213ENST00000509712 CTDSPL2Q05D32 466 aa7.57□□□□□ -1.2
CCDC30-213ENST00000509712 IFFO2Q5TF58 517 aa7.57□□□□□ -1.2
CCDC30-213ENST00000509712 PRR7Q8TB68 274 aa7.57□□□□□ -1.2
CCDC30-213ENST00000509712 POM121Q96HA1 1249 aa7.57□□□□□ -1.2
CCDC30-213ENST00000509712 GJD4Q96KN9 370 aaPredicted RBP7.57□□□□□ -1.2
CCDC30-213ENST00000509712 GPR37L1O60883 481 aa7.56□□□□□ -1.2
CCDC30-213ENST00000509712 UBTFP17480 764 aaKnown RBP7.56□□□□□ -1.2
CCDC30-213ENST00000509712 DESI1Q6ICB0 168 aa7.56□□□□□ -1.2
CCDC30-213ENST00000509712 HMX1Q9NP08 348 aaPredicted RBP7.56□□□□□ -1.2
CCDC30-213ENST00000509712 COG6Q9Y2V7 657 aa7.56□□□□□ -1.2
CCDC30-213ENST00000509712 NR1I2O75469 434 aa7.55□□□□□ -1.2
CCDC30-213ENST00000509712 COPS2P61201 443 aa7.55□□□□□ -1.2
CCDC30-213ENST00000509712 MTRQ99707 1265 aa7.55□□□□□ -1.2
CCDC30-213ENST00000509712 TJAP1Q5JTD0 557 aa7.54□□□□□ -1.2
CCDC30-213ENST00000509712 FNBP4Q8N3X1 1017 aaPredicted RBP7.54□□□□□ -1.2
CCDC30-213ENST00000509712 HELBQ8NG08 1087 aaPredicted RBP7.54□□□□□ -1.2
CCDC30-213ENST00000509712 USB1Q9BQ65 265 aaKnown RBP7.54□□□□□ -1.2
CCDC30-213ENST00000509712 TRIM34Q9BYJ4 488 aa7.54□□□□□ -1.2
CCDC30-213ENST00000509712 A0A0G2JS52 829 aa7.54□□□□□ -1.2
CCDC30-213ENST00000509712 PER1O15534 1290 aaPredicted RBP7.54□□□□□ -1.2
CCDC30-213ENST00000509712 LRRN4Q8WUT4 740 aa7.54□□□□□ -1.2
CCDC30-213ENST00000509712 FMNL1O95466 1100 aaPredicted RBP7.53□□□□□ -1.2
CCDC30-213ENST00000509712 MSS51Q4VC12 460 aa7.53□□□□□ -1.2
CCDC30-213ENST00000509712 IL21Q9HBE4 155 aa7.53□□□□□ -1.2
CCDC30-213ENST00000509712 TLL1O43897 1013 aa7.52□□□□□ -1.21
CCDC30-213ENST00000509712 ITGBL1O95965 494 aaPredicted RBP7.52□□□□□ -1.21
CCDC30-213ENST00000509712 FAM160A2Q8N612 972 aaPredicted RBP7.52□□□□□ -1.21
CCDC30-213ENST00000509712 ZPR1O75312 459 aa7.51□□□□□ -1.21
CCDC30-213ENST00000509712 ZNF516Q92618 1163 aa7.51□□□□□ -1.21
CCDC30-213ENST00000509712 SUPT5HO00267 1087 aaKnown RBP7.5□□□□□ -1.21
CCDC30-213ENST00000509712 LYPD8Q6UX82 237 aa7.5□□□□□ -1.21
CCDC30-213ENST00000509712 PROSER2Q86WR7 435 aaPredicted RBP7.5□□□□□ -1.21
CCDC30-213ENST00000509712 C1orf115Q9H7X2 142 aa7.5□□□□□ -1.21
CCDC30-213ENST00000509712 TBC1D2BQ9UPU7 963 aa7.5□□□□□ -1.21
CCDC30-213ENST00000509712 TRAK2O60296 914 aa7.5□□□□□ -1.21
CCDC30-213ENST00000509712 DXOO77932 396 aaKnown RBP7.5□□□□□ -1.21
CCDC30-213ENST00000509712 F12P00748 615 aaPredicted RBP7.5□□□□□ -1.21
CCDC30-213ENST00000509712 JUNDP17535 347 aa7.5□□□□□ -1.21
CCDC30-213ENST00000509712 EPS8L1Q8TE68 723 aa7.5□□□□□ -1.21
CCDC30-213ENST00000509712 TSC1Q92574 1164 aa7.5□□□□□ -1.21
CCDC30-213ENST00000509712 SPSB2Q99619 263 aa7.5□□□□□ -1.21
CCDC30-213ENST00000509712 GDPD2Q9HCC8 539 aa7.5□□□□□ -1.21
CCDC30-213ENST00000509712 PRDM9Q9NQV7 894 aa7.5□□□□□ -1.21
CCDC30-213ENST00000509712 ADH1BP00325 375 aa7.49□□□□□ -1.21
CCDC30-213ENST00000509712 MMP16P51512 607 aa7.49□□□□□ -1.21
CCDC30-213ENST00000509712 Q6ZNB5 142 aa7.49□□□□□ -1.21
CCDC30-213ENST00000509712 APBB1O00213 710 aa7.48□□□□□ -1.21
CCDC30-213ENST00000509712 KCNC4Q03721 635 aa7.48□□□□□ -1.21
CCDC30-213ENST00000509712 PTPRNQ16849 979 aa7.48□□□□□ -1.21
CCDC30-213ENST00000509712 ANP32EQ9BTT0 268 aa7.48□□□□□ -1.21
CCDC30-213ENST00000509712 RAD21O60216 631 aa7.47□□□□□ -1.21
CCDC30-213ENST00000509712 IRF5Q13568 498 aa7.47□□□□□ -1.21
CCDC30-213ENST00000509712 NKX2-3Q8TAU0 364 aa7.47□□□□□ -1.21
CCDC30-213ENST00000509712 PODXL2Q9NZ53 605 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms