RNA–Protein interactions for RNA: ENST00000509400.5

SIL1-212, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 4

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-212ENST00000509400 NEXMIFQ5QGS0 1516 aa16.36■□□□□ 0.21
SIL1-212ENST00000509400 PNPLA6Q8IY17 1366 aa16.35■□□□□ 0.21
SIL1-212ENST00000509400 NALCNQ8IZF0 1738 aa16.34■□□□□ 0.21
SIL1-212ENST00000509400 KIF1BO60333 1816 aa16.34■□□□□ 0.21
SIL1-212ENST00000509400 C8orf37Q96NL8 207 aa16.34■□□□□ 0.21
SIL1-212ENST00000509400 CFAP70Q5T0N1 1121 aa16.33■□□□□ 0.2
SIL1-212ENST00000509400 LRRC59Q96AG4 307 aaKnown RBP16.33■□□□□ 0.2
SIL1-212ENST00000509400 QTRT2Q9H974 415 aaKnown RBP16.33■□□□□ 0.2
SIL1-212ENST00000509400 TONSLQ96HA7 1378 aa16.33■□□□□ 0.2
SIL1-212ENST00000509400 NBPF8Q3BBV2 869 aa16.32■□□□□ 0.2
SIL1-212ENST00000509400 ADGRL3Q9HAR2 1447 aa16.32■□□□□ 0.2
SIL1-212ENST00000509400 STAC3Q96MF2 364 aa16.31■□□□□ 0.2
SIL1-212ENST00000509400 C14orf93Q9H972 538 aaKnown RBP16.31■□□□□ 0.2
SIL1-212ENST00000509400 RBM6P78332 1123 aaKnown RBP16.3■□□□□ 0.2
SIL1-212ENST00000509400 TMEM132EQ6IEE7 984 aa16.3■□□□□ 0.2
SIL1-212ENST00000509400 C1orf167Q5SNV9 1468 aa16.29■□□□□ 0.2
SIL1-212ENST00000509400 ADAMTS2O95450 1211 aa16.28■□□□□ 0.2
SIL1-212ENST00000509400 NRXN1Q9ULB1 1477 aa16.28■□□□□ 0.2
SIL1-212ENST00000509400 LAMC1P11047 1609 aa16.27■□□□□ 0.2
SIL1-212ENST00000509400 NBPF1Q3BBV0 1214 aa16.27■□□□□ 0.2
SIL1-212ENST00000509400 MYOM2P54296 1465 aa16.27■□□□□ 0.19
SIL1-212ENST00000509400 PIK3C2GO75747 1445 aa16.27■□□□□ 0.19
SIL1-212ENST00000509400 TIMELESSQ9UNS1 1208 aa16.26■□□□□ 0.19
SIL1-212ENST00000509400 NGLY1Q96IV0 654 aa16.25■□□□□ 0.19
SIL1-212ENST00000509400 ORAI2Q96SN7 254 aa16.25■□□□□ 0.19
SIL1-212ENST00000509400 PPLO60437 1756 aa16.25■□□□□ 0.19
SIL1-212ENST00000509400 ROBO2Q9HCK4 1378 aa16.25■□□□□ 0.19
SIL1-212ENST00000509400 SOS2Q07890 1332 aaPredicted RBP16.24■□□□□ 0.19
SIL1-212ENST00000509400 STK26Q9P289 416 aa16.24■□□□□ 0.19
SIL1-212ENST00000509400 PRAG1Q86YV5 1406 aa16.24■□□□□ 0.19
SIL1-212ENST00000509400 PTCH1Q13635 1447 aa16.21■□□□□ 0.19
SIL1-212ENST00000509400 USP21Q9UK80 565 aa16.21■□□□□ 0.19
SIL1-212ENST00000509400 IFT172Q9UG01 1749 aa16.21■□□□□ 0.19
SIL1-212ENST00000509400 FNBP4Q8N3X1 1017 aaPredicted RBP16.2■□□□□ 0.18
SIL1-212ENST00000509400 ATRNO75882 1429 aa16.19■□□□□ 0.18
SIL1-212ENST00000509400 ATAD2Q6PL18 1390 aa16.19■□□□□ 0.18
SIL1-212ENST00000509400 COL22A1Q8NFW1 1626 aaPredicted RBP16.19■□□□□ 0.18
SIL1-212ENST00000509400 LRPPRCP42704 1394 aaKnown RBP16.17■□□□□ 0.18
SIL1-212ENST00000509400 WAPLQ7Z5K2 1190 aa16.17■□□□□ 0.18
SIL1-212ENST00000509400 TRPC5Q9UL62 973 aaPredicted RBP16.17■□□□□ 0.18
SIL1-212ENST00000509400 TRAK1Q9UPV9 953 aa16.17■□□□□ 0.18
SIL1-212ENST00000509400 BCL9LQ86UU0 1499 aa16.16■□□□□ 0.18
SIL1-212ENST00000509400 ABCC11Q96J66 1382 aa16.15■□□□□ 0.18
SIL1-212ENST00000509400 YTHDC2Q9H6S0 1430 aaKnown RBP16.15■□□□□ 0.18
SIL1-212ENST00000509400 ROCK2O75116 1388 aaKnown RBP16.14■□□□□ 0.17
SIL1-212ENST00000509400 PXDNQ92626 1479 aa16.14■□□□□ 0.17
SIL1-212ENST00000509400 ADGRB1O14514 1584 aa16.13■□□□□ 0.17
SIL1-212ENST00000509400 XPCQ01831 940 aaPredicted RBP16.13■□□□□ 0.17
SIL1-212ENST00000509400 CARD11Q9BXL7 1154 aa16.13■□□□□ 0.17
SIL1-212ENST00000509400 MARF1Q9Y4F3 1742 aaKnown RBP16.13■□□□□ 0.17
SIL1-212ENST00000509400 PLEKHH1Q9ULM0 1364 aa16.13■□□□□ 0.17
SIL1-212ENST00000509400 SAFB2Q14151 953 aaKnown RBP eCLIP16.12■□□□□ 0.17
SIL1-212ENST00000509400 PRAM1Q96QH2 718 aa16.12■□□□□ 0.17
SIL1-212ENST00000509400 ESCO1Q5FWF5 840 aa16.11■□□□□ 0.17
SIL1-212ENST00000509400 SIRT1Q96EB6 747 aa16.11■□□□□ 0.17
SIL1-212ENST00000509400 CDC42BPGQ6DT37 1551 aa16.1■□□□□ 0.17
SIL1-212ENST00000509400 FOXO3O43524 673 aa16.1■□□□□ 0.17
SIL1-212ENST00000509400 ZRANB1Q9UGI0 708 aa16.1■□□□□ 0.17
SIL1-212ENST00000509400 GPRASP1Q5JY77 1395 aa16.1■□□□□ 0.17
SIL1-212ENST00000509400 POGKQ9P215 609 aa16.09■□□□□ 0.17
SIL1-212ENST00000509400 NPHP3Q7Z494 1330 aa16.09■□□□□ 0.17
SIL1-212ENST00000509400 RALGAPBQ86X10 1494 aa16.09■□□□□ 0.17
SIL1-212ENST00000509400 GJD4Q96KN9 370 aaPredicted RBP16.08■□□□□ 0.16
SIL1-212ENST00000509400 TECPR2O15040 1411 aa16.08■□□□□ 0.16
SIL1-212ENST00000509400 GLI3P10071 1580 aa16.08■□□□□ 0.16
SIL1-212ENST00000509400 NUTM2FA1L443 756 aa16.07■□□□□ 0.16
SIL1-212ENST00000509400 BRWD3Q6RI45 1802 aa16.05■□□□□ 0.16
SIL1-212ENST00000509400 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.05■□□□□ 0.16
SIL1-212ENST00000509400 TRPM1Q7Z4N2 1603 aa16.05■□□□□ 0.16
SIL1-212ENST00000509400 SLIT2O94813 1529 aa16.04■□□□□ 0.16
SIL1-212ENST00000509400 MINK1Q8N4C8 1332 aaPredicted RBP16.04■□□□□ 0.16
SIL1-212ENST00000509400 CCDC125Q86Z20 511 aa16.04■□□□□ 0.16
SIL1-212ENST00000509400 HIRIP3Q9BW71 556 aaPredicted RBP16.04■□□□□ 0.16
SIL1-212ENST00000509400 UNC5CLQ8IV45 518 aa16.03■□□□□ 0.16
SIL1-212ENST00000509400 KIAA1210Q9ULL0 1709 aa16.02■□□□□ 0.16
SIL1-212ENST00000509400 CENPJQ9HC77 1338 aaPredicted RBP16.02■□□□□ 0.16
SIL1-212ENST00000509400 ST20-MTHFSA0A0A6YYL1 179 aa16.02■□□□□ 0.16
SIL1-212ENST00000509400 DEFB132Q7Z7B7 95 aa16.02■□□□□ 0.16
SIL1-212ENST00000509400 SPATA31A3Q5VYP0 1347 aa16.01■□□□□ 0.15
SIL1-212ENST00000509400 DLC1Q96QB1 1528 aa16.01■□□□□ 0.15
SIL1-212ENST00000509400 ZEB1P37275 1124 aaPredicted RBP16.01■□□□□ 0.15
SIL1-212ENST00000509400 FMN2Q9NZ56 1722 aa16.01■□□□□ 0.15
SIL1-212ENST00000509400 HSPA5P11021 654 aaKnown RBP16■□□□□ 0.15
SIL1-212ENST00000509400 USP32Q8NFA0 1604 aa16■□□□□ 0.15
SIL1-212ENST00000509400 BLMP54132 1417 aaPredicted RBP16■□□□□ 0.15
SIL1-212ENST00000509400 USP47Q96K76 1375 aa16■□□□□ 0.15
SIL1-212ENST00000509400 RGPD8O14715 1765 aaPredicted RBP15.99■□□□□ 0.15
SIL1-212ENST00000509400 KNDC1Q76NI1 1749 aa15.99■□□□□ 0.15
SIL1-212ENST00000509400 TESK2Q96S53 571 aa15.98■□□□□ 0.15
SIL1-212ENST00000509400 WASLO00401 505 aaPredicted RBP15.97■□□□□ 0.15
SIL1-212ENST00000509400 EIF4G2P78344 907 aaKnown RBP eCLIP15.97■□□□□ 0.155e-8■■■□□ 18.8
SIL1-212ENST00000509400 KRT28Q7Z3Y7 464 aa15.97■□□□□ 0.15
SIL1-212ENST00000509400 CABLES1Q8TDN4 633 aa15.97■□□□□ 0.15
SIL1-212ENST00000509400 CDK19Q9BWU1 502 aa15.97■□□□□ 0.15
SIL1-212ENST00000509400 KIF1AQ12756 1690 aa15.96■□□□□ 0.15
SIL1-212ENST00000509400 SEPT12Q8IYM1 358 aa15.96■□□□□ 0.15
SIL1-212ENST00000509400 EIF3AQ14152 1382 aaKnown RBP15.96■□□□□ 0.15
SIL1-212ENST00000509400 PLCH1Q4KWH8 1693 aa15.95■□□□□ 0.14
SIL1-212ENST00000509400 ABCA3Q99758 1704 aa15.94■□□□□ 0.14
SIL1-212ENST00000509400 PLEKHG5O94827 1062 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms