RNA–Protein interactions for RNA: ENST00000509281.1

SNX2-208, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-208ENST00000509281 TRIM32Q13049 653 aa9.66□□□□□ -0.86
SNX2-208ENST00000509281 ZBTB24O43167 697 aaPredicted RBP9.63□□□□□ -0.87
SNX2-208ENST00000509281 ADAM23O75077 832 aa9.63□□□□□ -0.87
SNX2-208ENST00000509281 ADAMTS8Q9UP79 889 aa9.63□□□□□ -0.87
SNX2-208ENST00000509281 REPIN1Q9BWE0 567 aaKnown RBP9.61□□□□□ -0.87
SNX2-208ENST00000509281 RCCD1A6NED2 376 aa9.6□□□□□ -0.87
SNX2-208ENST00000509281 FOXK2Q01167 660 aa9.57□□□□□ -0.88
SNX2-208ENST00000509281 LCE3BQ5TA77 95 aa9.57□□□□□ -0.88
SNX2-208ENST00000509281 MORN1Q5T089 497 aa9.56□□□□□ -0.88
SNX2-208ENST00000509281 RBM46Q8TBY0 533 aaKnown RBP9.56□□□□□ -0.88
SNX2-208ENST00000509281 ZFP42Q96MM3 310 aa9.56□□□□□ -0.88
SNX2-208ENST00000509281 ADGRG1Q9Y653 693 aa9.56□□□□□ -0.88
SNX2-208ENST00000509281 CAPN5O15484 640 aaPredicted RBP9.54□□□□□ -0.88
SNX2-208ENST00000509281 ARIH1Q9Y4X5 557 aaPredicted RBP9.54□□□□□ -0.88
SNX2-208ENST00000509281 SKOR1P84550 965 aa9.53□□□□□ -0.88
SNX2-208ENST00000509281 KRT76Q01546 638 aa9.53□□□□□ -0.88
SNX2-208ENST00000509281 MSS51Q4VC12 460 aa9.53□□□□□ -0.88
SNX2-208ENST00000509281 RC3H1Q5TC82 1133 aaKnown RBP9.52□□□□□ -0.89
SNX2-208ENST00000509281 FMNL1O95466 1100 aaPredicted RBP9.51□□□□□ -0.89
SNX2-208ENST00000509281 ALDH1A1P00352 501 aa9.51□□□□□ -0.89
SNX2-208ENST00000509281 IRS1P35568 1242 aa9.51□□□□□ -0.89
SNX2-208ENST00000509281 KRTAP4-12Q9BQ66 201 aa9.51□□□□□ -0.89
SNX2-208ENST00000509281 SOBPA7XYQ1 873 aa9.5□□□□□ -0.89
SNX2-208ENST00000509281 BRICD5Q6PL45 260 aa9.48□□□□□ -0.89
SNX2-208ENST00000509281 Q8N3U1 123 aa9.48□□□□□ -0.89
SNX2-208ENST00000509281 KRTAP9-9Q9BYP9 154 aa9.48□□□□□ -0.89
SNX2-208ENST00000509281 KRTAP9-4Q9BYQ2 154 aa9.48□□□□□ -0.89
SNX2-208ENST00000509281 SLC27A5Q9Y2P5 690 aa9.48□□□□□ -0.89
SNX2-208ENST00000509281 SALL2Q9Y467 1007 aaPredicted RBP9.48□□□□□ -0.89
SNX2-208ENST00000509281 FAM161AQ3B820 660 aa9.47□□□□□ -0.89
SNX2-208ENST00000509281 ZNF385CQ66K41 422 aaPredicted RBP9.46□□□□□ -0.9
SNX2-208ENST00000509281 SIAH2O43255 324 aa9.45□□□□□ -0.9
SNX2-208ENST00000509281 KANK3Q6NY19 840 aa9.45□□□□□ -0.9
SNX2-208ENST00000509281 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.44□□□□□ -0.9
SNX2-208ENST00000509281 MMP16P51512 607 aa9.44□□□□□ -0.9
SNX2-208ENST00000509281 WNT7BP56706 349 aa9.44□□□□□ -0.9
SNX2-208ENST00000509281 FECHP22830 423 aa9.43□□□□□ -0.9
SNX2-208ENST00000509281 FUT2Q10981 343 aa9.43□□□□□ -0.9
SNX2-208ENST00000509281 RNF19BQ6ZMZ0 732 aa9.43□□□□□ -0.9
SNX2-208ENST00000509281 RTN4Q9NQC3 1192 aaKnown RBP9.43□□□□□ -0.9
SNX2-208ENST00000509281 PPFIA3O75145 1194 aa9.42□□□□□ -0.9
SNX2-208ENST00000509281 KRTAP4-8A0A0G2JLE6 195 aa9.41□□□□□ -0.9
SNX2-208ENST00000509281 ARHGEF15O94989 841 aa9.41□□□□□ -0.9
SNX2-208ENST00000509281 ITGB2P05107 769 aa9.41□□□□□ -0.9
SNX2-208ENST00000509281 PTGDRQ13258 359 aa9.41□□□□□ -0.9
SNX2-208ENST00000509281 CNTNAP3BQ96NU0 1288 aa9.4□□□□□ -0.9
SNX2-208ENST00000509281 CNTNAP3Q9BZ76 1288 aa9.4□□□□□ -0.9
SNX2-208ENST00000509281 ATP6V1AP38606 617 aa9.39□□□□□ -0.91
SNX2-208ENST00000509281 MRPL14Q6P1L8 145 aaKnown RBP9.39□□□□□ -0.91
SNX2-208ENST00000509281 GPR161Q8N6U8 529 aaKnown RBP9.39□□□□□ -0.91
SNX2-208ENST00000509281 SPOCK3Q9BQ16 436 aa9.39□□□□□ -0.91
SNX2-208ENST00000509281 MSTNO14793 375 aa9.38□□□□□ -0.91
SNX2-208ENST00000509281 AMER1Q5JTC6 1135 aaPredicted RBP9.37□□□□□ -0.91
SNX2-208ENST00000509281 PURBQ96QR8 312 aaKnown RBP9.37□□□□□ -0.91
SNX2-208ENST00000509281 PLA2G4EQ3MJ16 856 aa9.36□□□□□ -0.91
SNX2-208ENST00000509281 SVOPQ8N4V2 548 aa9.36□□□□□ -0.91
SNX2-208ENST00000509281 WHAMMQ8TF30 809 aa9.36□□□□□ -0.91
SNX2-208ENST00000509281 WASF2Q9Y6W5 498 aa9.36□□□□□ -0.91
SNX2-208ENST00000509281 PROCP04070 461 aa9.35□□□□□ -0.91
SNX2-208ENST00000509281 E2F4Q16254 413 aa9.35□□□□□ -0.91
SNX2-208ENST00000509281 DXOO77932 396 aaKnown RBP9.34□□□□□ -0.91
SNX2-208ENST00000509281 RSPH4AQ5TD94 716 aa9.34□□□□□ -0.91
SNX2-208ENST00000509281 PXYLP1Q8TE99 480 aa9.34□□□□□ -0.91
SNX2-208ENST00000509281 SCARF1Q14162 830 aa9.32□□□□□ -0.92
SNX2-208ENST00000509281 K7ELQ4 463 aaPredicted RBP9.3□□□□□ -0.92
SNX2-208ENST00000509281 DCAF8L2P0C7V8 631 aa9.29□□□□□ -0.92
SNX2-208ENST00000509281 SLURP2P0DP57 97 aa9.29□□□□□ -0.92
SNX2-208ENST00000509281 SCARF2Q96GP6 870 aaPredicted RBP9.29□□□□□ -0.92
SNX2-208ENST00000509281 MARSP56192 900 aaKnown RBP9.28□□□□□ -0.92
SNX2-208ENST00000509281 RNFT1Q5M7Z0 435 aa9.28□□□□□ -0.92
SNX2-208ENST00000509281 COL25A1Q9BXS0 654 aaPredicted RBP9.28□□□□□ -0.92
SNX2-208ENST00000509281 TIMP2P16035 220 aa9.27□□□□□ -0.93
SNX2-208ENST00000509281 EHBP1Q8NDI1 1231 aa9.27□□□□□ -0.93
SNX2-208ENST00000509281 RDH13Q8NBN7 331 aa9.26□□□□□ -0.93
SNX2-208ENST00000509281 BTBD11A6QL63 1104 aa9.25□□□□□ -0.93
SNX2-208ENST00000509281 MAN1A2O60476 641 aa9.25□□□□□ -0.93
SNX2-208ENST00000509281 GCGRP47871 477 aa9.25□□□□□ -0.93
SNX2-208ENST00000509281 CCDC24Q8N4L8 307 aa9.25□□□□□ -0.93
SNX2-208ENST00000509281 DCAF5Q96JK2 942 aa9.25□□□□□ -0.93
SNX2-208ENST00000509281 TLL2Q9Y6L7 1015 aa9.23□□□□□ -0.93
SNX2-208ENST00000509281 KLF16Q9BXK1 252 aaPredicted RBP9.22□□□□□ -0.93
SNX2-208ENST00000509281 NNTQ13423 1086 aa9.21□□□□□ -0.94
SNX2-208ENST00000509281 METTL3Q86U44 580 aaKnown RBP9.21□□□□□ -0.94
SNX2-208ENST00000509281 OATP04181 439 aa9.2□□□□□ -0.94
SNX2-208ENST00000509281 MLLT3P42568 568 aaPredicted RBP9.19□□□□□ -0.94
SNX2-208ENST00000509281 KRTAP19-1Q8IUB9 90 aa9.19□□□□□ -0.94
SNX2-208ENST00000509281 GALNT6Q8NCL4 622 aa9.19□□□□□ -0.94
SNX2-208ENST00000509281 USB1Q9BQ65 265 aaKnown RBP9.19□□□□□ -0.94
SNX2-208ENST00000509281 DAXXQ9UER7 740 aaPredicted RBP9.19□□□□□ -0.94
SNX2-208ENST00000509281 DDX11L8A8MPP1 907 aa9.18□□□□□ -0.94
SNX2-208ENST00000509281 ADH1CP00326 375 aa9.18□□□□□ -0.94
SNX2-208ENST00000509281 Q3C1V9 767 aa9.18□□□□□ -0.94
SNX2-208ENST00000509281 NANOS1Q8WY41 292 aaKnown RBP9.18□□□□□ -0.94
SNX2-208ENST00000509281 WDR4P57081 412 aaKnown RBP9.17□□□□□ -0.94
SNX2-208ENST00000509281 DNMT3LQ9UJW3 386 aa9.17□□□□□ -0.94
SNX2-208ENST00000509281 SH3BP2P78314 561 aa9.16□□□□□ -0.94
SNX2-208ENST00000509281 PTCRAQ6ISU1 281 aaPredicted RBP9.16□□□□□ -0.94
SNX2-208ENST00000509281 C6orf118Q5T5N4 469 aa9.14□□□□□ -0.95
SNX2-208ENST00000509281 BAG6P46379 1132 aa9.13□□□□□ -0.95
SNX2-208ENST00000509281 LYPD4Q6UWN0 246 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms