RNA–Protein interactions for RNA: ENST00000509234.1

TRAPPC13-210, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-210ENST00000509234 ANKK1Q8NFD2 765 aa8.72□□□□□ -1.01
TRAPPC13-210ENST00000509234 TMEM259Q4ZIN3 620 aa8.71□□□□□ -1.02
TRAPPC13-210ENST00000509234 MORN1Q5T089 497 aa8.71□□□□□ -1.02
TRAPPC13-210ENST00000509234 BCAMP50895 628 aa8.7□□□□□ -1.02
TRAPPC13-210ENST00000509234 KMT5BQ4FZB7 885 aa8.7□□□□□ -1.02
TRAPPC13-210ENST00000509234 CABLES1Q8TDN4 633 aa8.7□□□□□ -1.02
TRAPPC13-210ENST00000509234 ZBTB3Q9H5J0 574 aa8.7□□□□□ -1.02
TRAPPC13-210ENST00000509234 A6NJR5 290 aa8.69□□□□□ -1.02
TRAPPC13-210ENST00000509234 TRAF7Q6Q0C0 670 aa8.69□□□□□ -1.02
TRAPPC13-210ENST00000509234 TSR3Q9UJK0 312 aaKnown RBP8.69□□□□□ -1.02
TRAPPC13-210ENST00000509234 APLP1P51693 650 aa8.68□□□□□ -1.02
TRAPPC13-210ENST00000509234 CSPP1Q1MSJ5 1256 aa8.68□□□□□ -1.02
TRAPPC13-210ENST00000509234 GRIPAP1Q4V328 841 aa8.68□□□□□ -1.02
TRAPPC13-210ENST00000509234 MTMR14Q8NCE2 650 aa8.68□□□□□ -1.02
TRAPPC13-210ENST00000509234 SNRKQ9NRH2 765 aa8.68□□□□□ -1.02
TRAPPC13-210ENST00000509234 RNF40O75150 1001 aa8.67□□□□□ -1.02
TRAPPC13-210ENST00000509234 MTMR2Q13614 643 aa8.67□□□□□ -1.02
TRAPPC13-210ENST00000509234 LAPTM4AQ15012 233 aa8.67□□□□□ -1.02
TRAPPC13-210ENST00000509234 PRR14Q9BWN1 585 aa8.67□□□□□ -1.02
TRAPPC13-210ENST00000509234 HPS5Q9UPZ3 1129 aa8.67□□□□□ -1.02
TRAPPC13-210ENST00000509234 SLC27A5Q9Y2P5 690 aa8.66□□□□□ -1.02
TRAPPC13-210ENST00000509234 SALL2Q9Y467 1007 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC13-210ENST00000509234 CFAP99D6REC4 459 aa8.65□□□□□ -1.02
TRAPPC13-210ENST00000509234 GFRA3O60609 400 aa8.65□□□□□ -1.02
TRAPPC13-210ENST00000509234 PPP4CP60510 307 aa8.65□□□□□ -1.02
TRAPPC13-210ENST00000509234 THAP11Q96EK4 314 aa8.65□□□□□ -1.02
TRAPPC13-210ENST00000509234 ITGBL1O95965 494 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC13-210ENST00000509234 PUS10Q3MIT2 529 aaKnown RBP8.64□□□□□ -1.03
TRAPPC13-210ENST00000509234 FNBP4Q8N3X1 1017 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC13-210ENST00000509234 WBP1LQ9NX94 342 aa8.64□□□□□ -1.03
TRAPPC13-210ENST00000509234 LCE2BO14633 110 aa8.63□□□□□ -1.03
TRAPPC13-210ENST00000509234 USP17L8P0C7I0 530 aa8.63□□□□□ -1.03
TRAPPC13-210ENST00000509234 CLUAP1Q96AJ1 413 aa8.63□□□□□ -1.03
TRAPPC13-210ENST00000509234 POM121Q96HA1 1249 aa8.63□□□□□ -1.03
TRAPPC13-210ENST00000509234 GJD4Q96KN9 370 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC13-210ENST00000509234 COG6Q9Y2V7 657 aa8.63□□□□□ -1.03
TRAPPC13-210ENST00000509234 GPR37L1O60883 481 aa8.62□□□□□ -1.03
TRAPPC13-210ENST00000509234 BRICD5Q6PL45 260 aa8.62□□□□□ -1.03
TRAPPC13-210ENST00000509234 RETREG3Q86VR2 466 aa8.62□□□□□ -1.03
TRAPPC13-210ENST00000509234 SYMPKQ92797 1274 aaKnown RBP8.62□□□□□ -1.03
TRAPPC13-210ENST00000509234 NUTM2BA6NNL0 878 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC13-210ENST00000509234 NUTM2EB1AL46 878 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC13-210ENST00000509234 UBTFP17480 764 aaKnown RBP8.61□□□□□ -1.03
TRAPPC13-210ENST00000509234 NUTM2DQ5VT03 806 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC13-210ENST00000509234 DESI1Q6ICB0 168 aa8.61□□□□□ -1.03
TRAPPC13-210ENST00000509234 BLOC1S3Q6QNY0 202 aa8.61□□□□□ -1.03
TRAPPC13-210ENST00000509234 RNF19BQ6ZMZ0 732 aa8.61□□□□□ -1.03
TRAPPC13-210ENST00000509234 NUTM2AQ8IVF1 878 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC13-210ENST00000509234 AP1G2O75843 785 aa8.6□□□□□ -1.03
TRAPPC13-210ENST00000509234 CTDSPL2Q05D32 466 aa8.6□□□□□ -1.03
TRAPPC13-210ENST00000509234 Q3C1V9 767 aa8.6□□□□□ -1.03
TRAPPC13-210ENST00000509234 NYAP1Q6ZVC0 841 aa8.6□□□□□ -1.03
TRAPPC13-210ENST00000509234 SCUBE3Q8IX30 993 aa8.6□□□□□ -1.03
TRAPPC13-210ENST00000509234 TRIM34Q9BYJ4 488 aa8.6□□□□□ -1.03
TRAPPC13-210ENST00000509234 ATP1B4Q9UN42 357 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC13-210ENST00000509234 C6orf229H3BNL8 230 aa8.59□□□□□ -1.03
TRAPPC13-210ENST00000509234 KCNC4Q03721 635 aa8.59□□□□□ -1.03
TRAPPC13-210ENST00000509234 PRR7Q8TB68 274 aa8.59□□□□□ -1.03
TRAPPC13-210ENST00000509234 C1orf115Q9H7X2 142 aa8.59□□□□□ -1.03
TRAPPC13-210ENST00000509234 HMX1Q9NP08 348 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC13-210ENST00000509234 PCDHB3Q9Y5E6 796 aa8.59□□□□□ -1.03
TRAPPC13-210ENST00000509234 TRAK2O60296 914 aa8.58□□□□□ -1.04
TRAPPC13-210ENST00000509234 SUPT5HO00267 1087 aaKnown RBP8.57□□□□□ -1.04
TRAPPC13-210ENST00000509234 PROSER2Q86WR7 435 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC13-210ENST00000509234 NR1I2O75469 434 aa8.56□□□□□ -1.04
TRAPPC13-210ENST00000509234 ZNF787Q6DD87 383 aa8.56□□□□□ -1.04
TRAPPC13-210ENST00000509234 HELBQ8NG08 1087 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC13-210ENST00000509234 PER1O15534 1290 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC13-210ENST00000509234 MSS51Q4VC12 460 aa8.55□□□□□ -1.04
TRAPPC13-210ENST00000509234 LRRN4Q8WUT4 740 aa8.55□□□□□ -1.04
TRAPPC13-210ENST00000509234 USB1Q9BQ65 265 aaKnown RBP8.55□□□□□ -1.04
TRAPPC13-210ENST00000509234 FMNL1O95466 1100 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC13-210ENST00000509234 LYPD8Q6UX82 237 aa8.54□□□□□ -1.04
TRAPPC13-210ENST00000509234 APBB1O00213 710 aa8.53□□□□□ -1.04
TRAPPC13-210ENST00000509234 IRF5Q13568 498 aa8.53□□□□□ -1.04
TRAPPC13-210ENST00000509234 TJAP1Q5JTD0 557 aa8.53□□□□□ -1.04
TRAPPC13-210ENST00000509234 FAM160A2Q8N612 972 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC13-210ENST00000509234 GDPD2Q9HCC8 539 aa8.53□□□□□ -1.04
TRAPPC13-210ENST00000509234 TBC1D2BQ9UPU7 963 aa8.53□□□□□ -1.04
TRAPPC13-210ENST00000509234 F12P00748 615 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC13-210ENST00000509234 MMP16P51512 607 aa8.52□□□□□ -1.05
TRAPPC13-210ENST00000509234 EPS8L1Q8TE68 723 aa8.52□□□□□ -1.05
TRAPPC13-210ENST00000509234 RAD21O60216 631 aa8.51□□□□□ -1.05
TRAPPC13-210ENST00000509234 DXOO77932 396 aaKnown RBP8.51□□□□□ -1.05
TRAPPC13-210ENST00000509234 JUNDP17535 347 aa8.51□□□□□ -1.05
TRAPPC13-210ENST00000509234 MTRQ99707 1265 aa8.51□□□□□ -1.05
TRAPPC13-210ENST00000509234 NDUFB9Q9Y6M9 179 aa8.51□□□□□ -1.05
TRAPPC13-210ENST00000509234 RB1CC1Q8TDY2 1594 aa8.51□□□□□ -1.05
TRAPPC13-210ENST00000509234 ZPR1O75312 459 aa8.5□□□□□ -1.05
TRAPPC13-210ENST00000509234 PTPRNQ16849 979 aa8.5□□□□□ -1.05
TRAPPC13-210ENST00000509234 ZNF775Q96BV0 537 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC13-210ENST00000509234 NRG2O14511 850 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC13-210ENST00000509234 COPS2P61201 443 aa8.49□□□□□ -1.05
TRAPPC13-210ENST00000509234 SPSB2Q99619 263 aa8.49□□□□□ -1.05
TRAPPC13-210ENST00000509234 NACADO15069 1562 aa8.48□□□□□ -1.05
TRAPPC13-210ENST00000509234 ADH1BP00325 375 aa8.48□□□□□ -1.05
TRAPPC13-210ENST00000509234 ARID3CA6NKF2 412 aa8.47□□□□□ -1.05
TRAPPC13-210ENST00000509234 TLL1O43897 1013 aa8.47□□□□□ -1.05
TRAPPC13-210ENST00000509234 NR6A1Q15406 480 aa8.47□□□□□ -1.05
TRAPPC13-210ENST00000509234 TSC1Q92574 1164 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms