RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 YEATS2Q9ULM3 1422 aa14.3□□□□□ -0.12
SEC31A-228ENST00000509142 SETBP1Q9Y6X0 1596 aa14.3□□□□□ -0.12
SEC31A-228ENST00000509142 IFT172Q9UG01 1749 aa14.3□□□□□ -0.12
SEC31A-228ENST00000509142 POGKQ9P215 609 aa14.3□□□□□ -0.12
SEC31A-228ENST00000509142 MS4A1P11836 297 aa14.29□□□□□ -0.12
SEC31A-228ENST00000509142 E9PSI1 815 aa14.29□□□□□ -0.12
SEC31A-228ENST00000509142 NGEFQ8N5V2 710 aa14.28□□□□□ -0.12
SEC31A-228ENST00000509142 DMRT2Q9Y5R5 561 aa14.28□□□□□ -0.12
SEC31A-228ENST00000509142 DIP2CQ9Y2E4 1556 aa14.27□□□□□ -0.12
SEC31A-228ENST00000509142 CAMSAP1Q5T5Y3 1602 aa14.27□□□□□ -0.12
SEC31A-228ENST00000509142 FBXO31Q5XUX0 539 aaPredicted RBP14.27□□□□□ -0.12
SEC31A-228ENST00000509142 MTHFSP49914 203 aa14.27□□□□□ -0.13
SEC31A-228ENST00000509142 PPLO60437 1756 aa14.27□□□□□ -0.13
SEC31A-228ENST00000509142 POLR3AO14802 1390 aaPredicted RBP14.26□□□□□ -0.13
SEC31A-228ENST00000509142 CANXP27824 592 aaKnown RBP14.26□□□□□ -0.13
SEC31A-228ENST00000509142 MLECQ14165 292 aa14.26□□□□□ -0.13
SEC31A-228ENST00000509142 TRMT2AQ8IZ69 625 aaKnown RBP14.26□□□□□ -0.13
SEC31A-228ENST00000509142 ARHGAP31Q2M1Z3 1444 aa14.25□□□□□ -0.13
SEC31A-228ENST00000509142 MINK1Q8N4C8 1332 aaPredicted RBP14.25□□□□□ -0.13
SEC31A-228ENST00000509142 RRP7AQ9Y3A4 280 aaKnown RBP14.25□□□□□ -0.13
SEC31A-228ENST00000509142 ADGRB1O14514 1584 aa14.25□□□□□ -0.13
SEC31A-228ENST00000509142 LAS1LQ9Y4W2 734 aaKnown RBP14.25□□□□□ -0.13
SEC31A-228ENST00000509142 MYO3AQ8NEV4 1616 aa14.24□□□□□ -0.13
SEC31A-228ENST00000509142 RUNDC1Q96C34 613 aa14.24□□□□□ -0.13
SEC31A-228ENST00000509142 PUS7Q96PZ0 661 aaKnown RBP14.24□□□□□ -0.13
SEC31A-228ENST00000509142 QRICH2Q9H0J4 1663 aa14.24□□□□□ -0.13
SEC31A-228ENST00000509142 PRAM1Q96QH2 718 aa14.23□□□□□ -0.13
SEC31A-228ENST00000509142 U2AF1L5P0DN76 240 aaPredicted RBP14.23□□□□□ -0.13
SEC31A-228ENST00000509142 U2AF1Q01081 240 aaKnown RBP eCLIP14.23□□□□□ -0.132e-7■■□□□ 14.3
SEC31A-228ENST00000509142 WWC1Q8IX03 1113 aa14.23□□□□□ -0.13
SEC31A-228ENST00000509142 TCP11L2Q8N4U5 519 aa14.22□□□□□ -0.13
SEC31A-228ENST00000509142 ESF1Q9H501 851 aaKnown RBP14.22□□□□□ -0.13
SEC31A-228ENST00000509142 BCAR3O75815 825 aa14.22□□□□□ -0.13
SEC31A-228ENST00000509142 TERF2IPQ9NYB0 399 aa14.22□□□□□ -0.13
SEC31A-228ENST00000509142 NKTRP30414 1462 aaKnown RBP14.22□□□□□ -0.13
SEC31A-228ENST00000509142 ANKRD36BQ8N2N9 1353 aa14.21□□□□□ -0.13
SEC31A-228ENST00000509142 GLI2P10070 1586 aa14.21□□□□□ -0.13
SEC31A-228ENST00000509142 SIGLEC1Q9BZZ2 1709 aa14.21□□□□□ -0.13
SEC31A-228ENST00000509142 NEXMIFQ5QGS0 1516 aa14.21□□□□□ -0.13
SEC31A-228ENST00000509142 GGNBP2Q9H3C7 697 aa14.2□□□□□ -0.14
SEC31A-228ENST00000509142 RICTORQ6R327 1708 aa14.2□□□□□ -0.14
SEC31A-228ENST00000509142 U2SURPO15042 1029 aaKnown RBP14.2□□□□□ -0.14
SEC31A-228ENST00000509142 C8orf34Q49A92 452 aa14.2□□□□□ -0.14
SEC31A-228ENST00000509142 CENPQQ7L2Z9 268 aaPredicted RBP14.2□□□□□ -0.14
SEC31A-228ENST00000509142 SLC4A3P48751 1232 aa14.19□□□□□ -0.14
SEC31A-228ENST00000509142 HDGFL2Q7Z4V5 671 aaPredicted RBP14.19□□□□□ -0.14
SEC31A-228ENST00000509142 FRAT1Q92837 279 aaPredicted RBP14.19□□□□□ -0.14
SEC31A-228ENST00000509142 ZFYVE9O95405 1425 aa14.18□□□□□ -0.14
SEC31A-228ENST00000509142 NSD2O96028 1365 aa14.18□□□□□ -0.14
SEC31A-228ENST00000509142 PIK3C2BO00750 1634 aa14.17□□□□□ -0.14
SEC31A-228ENST00000509142 ATAD2Q6PL18 1390 aa14.17□□□□□ -0.14
SEC31A-228ENST00000509142 ZC3H13Q5T200 1668 aaKnown RBP14.17□□□□□ -0.14
SEC31A-228ENST00000509142 CDK19Q9BWU1 502 aa14.16□□□□□ -0.14
SEC31A-228ENST00000509142 PPP6R1Q9UPN7 881 aa14.16□□□□□ -0.14
SEC31A-228ENST00000509142 TULP4Q9NRJ4 1543 aa14.16□□□□□ -0.14
SEC31A-228ENST00000509142 YTHDC2Q9H6S0 1430 aaKnown RBP14.15□□□□□ -0.14
SEC31A-228ENST00000509142 A0A1W2PP64 1363 aa14.15□□□□□ -0.14
SEC31A-228ENST00000509142 NINLQ9Y2I6 1382 aa14.15□□□□□ -0.14
SEC31A-228ENST00000509142 NEFMP07197 916 aa14.15□□□□□ -0.14
SEC31A-228ENST00000509142 SHPRHQ149N8 1683 aa14.15□□□□□ -0.14
SEC31A-228ENST00000509142 IGHDP01880 384 aa14.15□□□□□ -0.14
SEC31A-228ENST00000509142 WDR63Q8IWG1 891 aa14.15□□□□□ -0.15
SEC31A-228ENST00000509142 TSPOAP1O95153 1857 aa14.14□□□□□ -0.15
SEC31A-228ENST00000509142 RGS3P49796 1198 aa14.14□□□□□ -0.15
SEC31A-228ENST00000509142 RTL5Q5HYW3 569 aaPredicted RBP14.14□□□□□ -0.15
SEC31A-228ENST00000509142 MAPK8IP3Q9UPT6 1336 aa14.14□□□□□ -0.15
SEC31A-228ENST00000509142 MYH16Q9H6N6 1097 aa14.14□□□□□ -0.15
SEC31A-228ENST00000509142 CABP1Q9NZU7 370 aa14.14□□□□□ -0.15
SEC31A-228ENST00000509142 ARHGEF28Q8N1W1 1705 aaKnown RBP14.13□□□□□ -0.15
SEC31A-228ENST00000509142 PPM1GO15355 546 aaPredicted RBP14.13□□□□□ -0.15
SEC31A-228ENST00000509142 COG6Q9Y2V7 657 aa14.13□□□□□ -0.15
SEC31A-228ENST00000509142 PDE3AQ14432 1141 aa14.13□□□□□ -0.15
SEC31A-228ENST00000509142 PREX1Q8TCU6 1659 aa14.12□□□□□ -0.15
SEC31A-228ENST00000509142 FYB1O15117 783 aa14.12□□□□□ -0.15
SEC31A-228ENST00000509142 WAPLQ7Z5K2 1190 aa14.12□□□□□ -0.15
SEC31A-228ENST00000509142 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.12□□□□□ -0.154e-7■■□□□ 13.2
SEC31A-228ENST00000509142 PANK1Q8TE04 598 aa14.12□□□□□ -0.15
SEC31A-228ENST00000509142 BCL2L13Q9BXK5 485 aa14.12□□□□□ -0.15
SEC31A-228ENST00000509142 ABCC11Q96J66 1382 aa14.11□□□□□ -0.15
SEC31A-228ENST00000509142 FAM161AQ3B820 660 aa14.11□□□□□ -0.15
SEC31A-228ENST00000509142 TMEM131LA2VDJ0 1609 aa14.1□□□□□ -0.15
SEC31A-228ENST00000509142 MYO5BQ9ULV0 1848 aa14.1□□□□□ -0.15
SEC31A-228ENST00000509142 TNNQ9UQP3 1299 aa14.1□□□□□ -0.15
SEC31A-228ENST00000509142 RARSP54136 660 aaKnown RBP14.1□□□□□ -0.15
SEC31A-228ENST00000509142 CCDC27Q2M243 656 aa14.1□□□□□ -0.15
SEC31A-228ENST00000509142 RIMBP3CA6NJZ7 1639 aa14.09□□□□□ -0.15
SEC31A-228ENST00000509142 RIMBP3BA6NNM3 1639 aa14.09□□□□□ -0.15
SEC31A-228ENST00000509142 RIMBP3Q9UFD9 1639 aa14.09□□□□□ -0.15
SEC31A-228ENST00000509142 DIAPH1O60610 1272 aaKnown RBP14.09□□□□□ -0.15
SEC31A-228ENST00000509142 USP19O94966 1318 aa14.09□□□□□ -0.15
SEC31A-228ENST00000509142 PTPRMP28827 1452 aa14.08□□□□□ -0.15
SEC31A-228ENST00000509142 HDGFP51858 240 aaKnown RBP14.08□□□□□ -0.16
SEC31A-228ENST00000509142 CLUAP1Q96AJ1 413 aa14.08□□□□□ -0.16
SEC31A-228ENST00000509142 RIMS2Q9UQ26 1411 aa14.08□□□□□ -0.16
SEC31A-228ENST00000509142 DIP2BQ9P265 1576 aa14.08□□□□□ -0.16
SEC31A-228ENST00000509142 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.08□□□□□ -0.16
SEC31A-228ENST00000509142 PNNQ9H307 717 aaKnown RBP14.08□□□□□ -0.16
SEC31A-228ENST00000509142 DAXXQ9UER7 740 aaPredicted RBP14.08□□□□□ -0.16
SEC31A-228ENST00000509142 USP32Q8NFA0 1604 aa14.08□□□□□ -0.16
SEC31A-228ENST00000509142 IL27Q8NEV9 243 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms