RNA–Protein interactions for RNA: ENST00000509090.1

COL6A4P2-204, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 455 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-204ENST00000509090 SH3D19Q5HYK7 790 aa11.59□□□□□ -0.55
COL6A4P2-204ENST00000509090 SPSB2Q99619 263 aa11.59□□□□□ -0.55
COL6A4P2-204ENST00000509090 LIMD1Q9UGP4 676 aa11.59□□□□□ -0.55
COL6A4P2-204ENST00000509090 ADH1BP00325 375 aa11.58□□□□□ -0.56
COL6A4P2-204ENST00000509090 PCDHB15Q9Y5E8 787 aa11.58□□□□□ -0.56
COL6A4P2-204ENST00000509090 GOPCQ9HD26 462 aa11.57□□□□□ -0.56
COL6A4P2-204ENST00000509090 POLR3EQ9NVU0 708 aa11.57□□□□□ -0.56
COL6A4P2-204ENST00000509090 CLK2P49760 499 aaKnown RBP11.56□□□□□ -0.56
COL6A4P2-204ENST00000509090 FAM160A2Q8N612 972 aaPredicted RBP11.56□□□□□ -0.56
COL6A4P2-204ENST00000509090 SYMPKQ92797 1274 aaKnown RBP11.56□□□□□ -0.56
COL6A4P2-204ENST00000509090 A0A0G2JS52 829 aa11.54□□□□□ -0.56
COL6A4P2-204ENST00000509090 USB1Q9BQ65 265 aaKnown RBP11.54□□□□□ -0.56
COL6A4P2-204ENST00000509090 MSS51Q4VC12 460 aa11.53□□□□□ -0.56
COL6A4P2-204ENST00000509090 PRPF38BQ5VTL8 546 aaKnown RBP11.53□□□□□ -0.56
COL6A4P2-204ENST00000509090 SLC6A16Q9GZN6 736 aa11.53□□□□□ -0.56
COL6A4P2-204ENST00000509090 C6orf229H3BNL8 230 aa11.52□□□□□ -0.57
COL6A4P2-204ENST00000509090 HRCP23327 699 aa11.52□□□□□ -0.57
COL6A4P2-204ENST00000509090 MTMR2Q13614 643 aa11.52□□□□□ -0.57
COL6A4P2-204ENST00000509090 PPP1R18Q6NYC8 613 aa11.52□□□□□ -0.57
COL6A4P2-204ENST00000509090 RETREG3Q86VR2 466 aa11.52□□□□□ -0.57
COL6A4P2-204ENST00000509090 PROCA1Q8NCQ7 364 aaPredicted RBP11.52□□□□□ -0.57
COL6A4P2-204ENST00000509090 SPDYE5A6NIY4 337 aa11.51□□□□□ -0.57
COL6A4P2-204ENST00000509090 LILRB3O75022 631 aa11.51□□□□□ -0.57
COL6A4P2-204ENST00000509090 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.51□□□□□ -0.57
COL6A4P2-204ENST00000509090 S1PR4O95977 384 aa11.5□□□□□ -0.57
COL6A4P2-204ENST00000509090 QPCTQ16769 361 aa11.5□□□□□ -0.57
COL6A4P2-204ENST00000509090 CSPP1Q1MSJ5 1256 aa11.5□□□□□ -0.57
COL6A4P2-204ENST00000509090 ZBTB3Q9H5J0 574 aa11.5□□□□□ -0.57
COL6A4P2-204ENST00000509090 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.5□□□□□ -0.57
COL6A4P2-204ENST00000509090 CABLES1Q8TDN4 633 aa11.49□□□□□ -0.57
COL6A4P2-204ENST00000509090 GGCXP38435 758 aa11.47□□□□□ -0.57
COL6A4P2-204ENST00000509090 MMP16P51512 607 aa11.47□□□□□ -0.57
COL6A4P2-204ENST00000509090 PCMTD1Q96MG8 357 aaPredicted RBP11.47□□□□□ -0.57
COL6A4P2-204ENST00000509090 PRDM9Q9NQV7 894 aa11.47□□□□□ -0.57
COL6A4P2-204ENST00000509090 RNF223E7ERA6 249 aa11.46□□□□□ -0.57
COL6A4P2-204ENST00000509090 FBXO31Q5XUX0 539 aaPredicted RBP11.46□□□□□ -0.57
COL6A4P2-204ENST00000509090 PRR7Q8TB68 274 aa11.46□□□□□ -0.57
COL6A4P2-204ENST00000509090 NUTM2BA6NNL0 878 aaPredicted RBP11.45□□□□□ -0.58
COL6A4P2-204ENST00000509090 NUTM2EB1AL46 878 aaPredicted RBP11.45□□□□□ -0.58
COL6A4P2-204ENST00000509090 DXOO77932 396 aaKnown RBP11.45□□□□□ -0.58
COL6A4P2-204ENST00000509090 RTL5Q5HYW3 569 aaPredicted RBP11.45□□□□□ -0.58
COL6A4P2-204ENST00000509090 NUTM2DQ5VT03 806 aaPredicted RBP11.45□□□□□ -0.58
COL6A4P2-204ENST00000509090 PPP2R2DQ66LE6 453 aa11.45□□□□□ -0.58
COL6A4P2-204ENST00000509090 NUTM2AQ8IVF1 878 aaPredicted RBP11.45□□□□□ -0.58
COL6A4P2-204ENST00000509090 CFAP99D6REC4 459 aa11.44□□□□□ -0.58
COL6A4P2-204ENST00000509090 PPEF1O14829 653 aaPredicted RBP11.44□□□□□ -0.58
COL6A4P2-204ENST00000509090 JUNDP17535 347 aa11.43□□□□□ -0.58
COL6A4P2-204ENST00000509090 DESI1Q6ICB0 168 aa11.43□□□□□ -0.58
COL6A4P2-204ENST00000509090 ANKLE1Q8NAG6 615 aa11.43□□□□□ -0.58
COL6A4P2-204ENST00000509090 ATP1B4Q9UN42 357 aaPredicted RBP11.42□□□□□ -0.58
COL6A4P2-204ENST00000509090 TMEM132AQ24JP5 1023 aa11.39□□□□□ -0.59
COL6A4P2-204ENST00000509090 FCF1Q9Y324 198 aaKnown RBP11.38□□□□□ -0.59
COL6A4P2-204ENST00000509090 RGS20O76081 388 aa11.37□□□□□ -0.59
COL6A4P2-204ENST00000509090 PLA2G2CQ5R387 149 aa11.37□□□□□ -0.59
COL6A4P2-204ENST00000509090 LYPD8Q6UX82 237 aa11.37□□□□□ -0.59
COL6A4P2-204ENST00000509090 RFC5P40937 340 aa11.36□□□□□ -0.59
COL6A4P2-204ENST00000509090 PTPRNQ16849 979 aa11.36□□□□□ -0.59
COL6A4P2-204ENST00000509090 EMID1Q96A84 441 aaPredicted RBP11.36□□□□□ -0.59
COL6A4P2-204ENST00000509090 HELBQ8NG08 1087 aaPredicted RBP11.34□□□□□ -0.59
COL6A4P2-204ENST00000509090 NUDT12Q9BQG2 462 aa11.34□□□□□ -0.59
COL6A4P2-204ENST00000509090 PER1O15534 1290 aaPredicted RBP11.33□□□□□ -0.6
COL6A4P2-204ENST00000509090 CTDSPL2Q05D32 466 aa11.33□□□□□ -0.6
COL6A4P2-204ENST00000509090 TSC1Q92574 1164 aa11.33□□□□□ -0.6
COL6A4P2-204ENST00000509090 CCNYL3P0C7X3 344 aa11.32□□□□□ -0.6
COL6A4P2-204ENST00000509090 LIAT1Q6ZQX7 453 aa11.32□□□□□ -0.6
COL6A4P2-204ENST00000509090 EVA1BQ9NVM1 165 aa11.32□□□□□ -0.6
COL6A4P2-204ENST00000509090 CCDC24Q8N4L8 307 aa11.31□□□□□ -0.6
COL6A4P2-204ENST00000509090 PRKD2Q9BZL6 878 aa11.31□□□□□ -0.6
COL6A4P2-204ENST00000509090 V9GY48 417 aaPredicted RBP11.31□□□□□ -0.6
COL6A4P2-204ENST00000509090 SLC19A1P41440 591 aa11.3□□□□□ -0.6
COL6A4P2-204ENST00000509090 TMEM259Q4ZIN3 620 aa11.3□□□□□ -0.6
COL6A4P2-204ENST00000509090 AP1G2O75843 785 aa11.29□□□□□ -0.6
COL6A4P2-204ENST00000509090 RPIAP49247 311 aa11.29□□□□□ -0.6
COL6A4P2-204ENST00000509090 PTCRAQ6ISU1 281 aaPredicted RBP11.29□□□□□ -0.6
COL6A4P2-204ENST00000509090 F12P00748 615 aaPredicted RBP11.28□□□□□ -0.6
COL6A4P2-204ENST00000509090 KCNH2Q12809 1159 aa11.28□□□□□ -0.6
COL6A4P2-204ENST00000509090 ZBTB24O43167 697 aaPredicted RBP11.26□□□□□ -0.61
COL6A4P2-204ENST00000509090 SPRYD7Q5W111 196 aa11.26□□□□□ -0.61
COL6A4P2-204ENST00000509090 LRRN4Q8WUT4 740 aa11.26□□□□□ -0.61
COL6A4P2-204ENST00000509090 USP17L8P0C7I0 530 aa11.25□□□□□ -0.61
COL6A4P2-204ENST00000509090 BANK1Q8NDB2 785 aa11.25□□□□□ -0.61
COL6A4P2-204ENST00000509090 MAP10Q9P2G4 905 aa11.24□□□□□ -0.61
COL6A4P2-204ENST00000509090 CD2BP2O95400 341 aaKnown RBP11.23□□□□□ -0.61
COL6A4P2-204ENST00000509090 CTHP32929 405 aa11.23□□□□□ -0.61
COL6A4P2-204ENST00000509090 TRIM32Q13049 653 aa11.22□□□□□ -0.61
COL6A4P2-204ENST00000509090 ZNF598Q86UK7 904 aaKnown RBP11.22□□□□□ -0.61
COL6A4P2-204ENST00000509090 UNC93B1Q9H1C4 597 aa11.22□□□□□ -0.61
COL6A4P2-204ENST00000509090 HMX1Q9NP08 348 aaPredicted RBP11.2□□□□□ -0.62
COL6A4P2-204ENST00000509090 NR6A1Q15406 480 aa11.18□□□□□ -0.62
COL6A4P2-204ENST00000509090 ZNF697Q5TEC3 545 aa11.18□□□□□ -0.62
COL6A4P2-204ENST00000509090 SOCS7O14512 581 aa11.17□□□□□ -0.62
COL6A4P2-204ENST00000509090 SKOR1P84550 965 aa11.17□□□□□ -0.62
COL6A4P2-204ENST00000509090 SNRKQ9NRH2 765 aa11.17□□□□□ -0.62
COL6A4P2-204ENST00000509090 WNT7BP56706 349 aa11.16□□□□□ -0.62
COL6A4P2-204ENST00000509090 EPS8L1Q8TE68 723 aa11.16□□□□□ -0.62
COL6A4P2-204ENST00000509090 BAP1Q92560 729 aa11.16□□□□□ -0.62
COL6A4P2-204ENST00000509090 TRIM34Q9BYJ4 488 aa11.16□□□□□ -0.62
COL6A4P2-204ENST00000509090 MTMR14Q8NCE2 650 aa11.15□□□□□ -0.62
COL6A4P2-204ENST00000509090 ARMC2Q8NEN0 867 aa11.15□□□□□ -0.62
COL6A4P2-204ENST00000509090 GJD4Q96KN9 370 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms