RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 WDR63Q8IWG1 891 aa17.98■□□□□ 0.47
TRIM41-204ENST00000508930 LAMC1P11047 1609 aa17.98■□□□□ 0.47
TRIM41-204ENST00000508930 NLRP1Q9C000 1473 aa17.98■□□□□ 0.47
TRIM41-204ENST00000508930 GOLGA6L22H0YM25 854 aa17.98■□□□□ 0.47
TRIM41-204ENST00000508930 ISY1Q9ULR0 285 aaKnown RBP17.97■□□□□ 0.47
TRIM41-204ENST00000508930 SYCP2Q9BX26 1530 aa17.96■□□□□ 0.47
TRIM41-204ENST00000508930 STAC3Q96MF2 364 aa17.96■□□□□ 0.47
TRIM41-204ENST00000508930 MTHFSP49914 203 aa17.95■□□□□ 0.46
TRIM41-204ENST00000508930 SKOR2Q2VWA4 1001 aaPredicted RBP17.95■□□□□ 0.46
TRIM41-204ENST00000508930 TNPO1Q92973 898 aaKnown RBP17.95■□□□□ 0.46
TRIM41-204ENST00000508930 SCAPERQ9BY12 1400 aa17.94■□□□□ 0.46
TRIM41-204ENST00000508930 NCLP19338 710 aaKnown RBP17.94■□□□□ 0.46
TRIM41-204ENST00000508930 TSR2Q969E8 191 aaKnown RBP17.94■□□□□ 0.46
TRIM41-204ENST00000508930 LNPKQ9C0E8 428 aa17.94■□□□□ 0.46
TRIM41-204ENST00000508930 DDX19BQ9UMR2 479 aa17.94■□□□□ 0.46
TRIM41-204ENST00000508930 SYNMO15061 1565 aa17.94■□□□□ 0.46
TRIM41-204ENST00000508930 U2SURPO15042 1029 aaKnown RBP17.93■□□□□ 0.46
TRIM41-204ENST00000508930 POLR3AO14802 1390 aaPredicted RBP17.93■□□□□ 0.46
TRIM41-204ENST00000508930 ZMYM3Q14202 1370 aa17.92■□□□□ 0.46
TRIM41-204ENST00000508930 SAMD9LQ8IVG5 1584 aa17.92■□□□□ 0.46
TRIM41-204ENST00000508930 MSNP26038 577 aaKnown RBP17.92■□□□□ 0.46
TRIM41-204ENST00000508930 PTMSP20962 102 aa17.92■□□□□ 0.46
TRIM41-204ENST00000508930 SLC12A5Q9H2X9 1139 aa17.91■□□□□ 0.46
TRIM41-204ENST00000508930 EFCAB2Q5VUJ9 269 aa17.91■□□□□ 0.46
TRIM41-204ENST00000508930 TPM2P07951 284 aa17.91■□□□□ 0.46
TRIM41-204ENST00000508930 EXOSC9Q06265 439 aaKnown RBP17.91■□□□□ 0.46
TRIM41-204ENST00000508930 TRAK1Q9UPV9 953 aa17.91■□□□□ 0.46
TRIM41-204ENST00000508930 ABCA8O94911 1581 aa17.9■□□□□ 0.46
TRIM41-204ENST00000508930 ERBB4Q15303 1308 aa17.89■□□□□ 0.46
TRIM41-204ENST00000508930 DDX49Q9Y6V7 483 aaKnown RBP17.89■□□□□ 0.45
TRIM41-204ENST00000508930 CIZ1Q9ULV3 898 aaPredicted RBP17.89■□□□□ 0.45
TRIM41-204ENST00000508930 MYO5CQ9NQX4 1742 aa17.89■□□□□ 0.45
TRIM41-204ENST00000508930 NSD3Q9BZ95 1437 aa17.89■□□□□ 0.45
TRIM41-204ENST00000508930 VIRMAQ69YN4 1812 aaKnown RBP17.88■□□□□ 0.45
TRIM41-204ENST00000508930 NASPP49321 788 aaPredicted RBP17.88■□□□□ 0.45
TRIM41-204ENST00000508930 KIAA1211Q6ZU35 1233 aa17.88■□□□□ 0.45
TRIM41-204ENST00000508930 GAS2L3Q86XJ1 694 aa17.88■□□□□ 0.45
TRIM41-204ENST00000508930 SPAG9O60271 1321 aaKnown RBP17.88■□□□□ 0.45
TRIM41-204ENST00000508930 TRIM27P14373 513 aa17.88■□□□□ 0.45
TRIM41-204ENST00000508930 IPO8O15397 1037 aaKnown RBP17.86■□□□□ 0.45
TRIM41-204ENST00000508930 HDAC1Q13547 482 aaPredicted RBP17.86■□□□□ 0.45
TRIM41-204ENST00000508930 ATF7IPQ6VMQ6 1270 aa17.86■□□□□ 0.45
TRIM41-204ENST00000508930 SSH1Q8WYL5 1049 aa17.86■□□□□ 0.45
TRIM41-204ENST00000508930 NOB1Q9ULX3 412 aaKnown RBP17.86■□□□□ 0.45
TRIM41-204ENST00000508930 CCDC173Q0VFZ6 552 aa17.86■□□□□ 0.45
TRIM41-204ENST00000508930 UNC13BO14795 1591 aa17.86■□□□□ 0.45
TRIM41-204ENST00000508930 ANKRD45Q5TZF3 282 aa17.85■□□□□ 0.45
TRIM41-204ENST00000508930 KANK1Q14678 1352 aa17.85■□□□□ 0.45
TRIM41-204ENST00000508930 ATP10AO60312 1499 aa17.85■□□□□ 0.45
TRIM41-204ENST00000508930 DUOX2Q9NRD8 1548 aa17.85■□□□□ 0.45
TRIM41-204ENST00000508930 TMEM57Q8N5G2 664 aa17.85■□□□□ 0.45
TRIM41-204ENST00000508930 ADGRF5Q8IZF2 1346 aa17.84■□□□□ 0.45
TRIM41-204ENST00000508930 KIF3BO15066 747 aa17.84■□□□□ 0.45
TRIM41-204ENST00000508930 SMC5Q8IY18 1101 aa17.84■□□□□ 0.45
TRIM41-204ENST00000508930 SNX21Q969T3 373 aa17.84■□□□□ 0.45
TRIM41-204ENST00000508930 ZNF692Q9BU19 519 aaPredicted RBP17.83■□□□□ 0.45
TRIM41-204ENST00000508930 IQGAP3Q86VI3 1631 aa17.83■□□□□ 0.44
TRIM41-204ENST00000508930 RAB3GAP1Q15042 981 aa17.83■□□□□ 0.44
TRIM41-204ENST00000508930 CCDC27Q2M243 656 aa17.83■□□□□ 0.44
TRIM41-204ENST00000508930 MAST1Q9Y2H9 1570 aa17.83■□□□□ 0.44
TRIM41-204ENST00000508930 SSFA2P28290 1259 aa17.82■□□□□ 0.44
TRIM41-204ENST00000508930 ZSCAN30Q86W11 494 aa17.82■□□□□ 0.44
TRIM41-204ENST00000508930 AFAP1Q8N556 730 aa17.82■□□□□ 0.44
TRIM41-204ENST00000508930 K7ELQ4 463 aaPredicted RBP17.82■□□□□ 0.44
TRIM41-204ENST00000508930 CT47B1P0C2W7 299 aaPredicted RBP17.82■□□□□ 0.44
TRIM41-204ENST00000508930 RBM25P49756 843 aaKnown RBP17.81■□□□□ 0.44
TRIM41-204ENST00000508930 CHD1LQ86WJ1 897 aa17.81■□□□□ 0.44
TRIM41-204ENST00000508930 RNF17Q9BXT8 1623 aaKnown RBP17.81■□□□□ 0.44
TRIM41-204ENST00000508930 RBM10P98175 930 aaKnown RBP17.81■□□□□ 0.44
TRIM41-204ENST00000508930 CALD1Q05682 793 aaKnown RBP17.81■□□□□ 0.44
TRIM41-204ENST00000508930 KDM5AP29375 1690 aaKnown RBP17.81■□□□□ 0.44
TRIM41-204ENST00000508930 PLXNC1O60486 1568 aa17.8■□□□□ 0.44
TRIM41-204ENST00000508930 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.8■□□□□ 0.44
TRIM41-204ENST00000508930 PDCL3Q9H2J4 239 aa17.8■□□□□ 0.44
TRIM41-204ENST00000508930 MADDQ8WXG6 1647 aa17.8■□□□□ 0.44
TRIM41-204ENST00000508930 ERVK-7P63135 1459 aa17.8■□□□□ 0.44
TRIM41-204ENST00000508930 FAM13BQ9NYF5 915 aa17.79■□□□□ 0.44
TRIM41-204ENST00000508930 PHF23Q9BUL5 403 aaPredicted RBP17.79■□□□□ 0.44
TRIM41-204ENST00000508930 R3HCC1Q9Y3T6 440 aaKnown RBP17.79■□□□□ 0.44
TRIM41-204ENST00000508930 PREX2Q70Z35 1606 aa17.78■□□□□ 0.44
TRIM41-204ENST00000508930 CDC42BPBQ9Y5S2 1711 aa17.78■□□□□ 0.44
TRIM41-204ENST00000508930 MCTP1Q6DN14 999 aa17.78■□□□□ 0.44
TRIM41-204ENST00000508930 RBM42Q9BTD8 480 aaKnown RBP17.78■□□□□ 0.44
TRIM41-204ENST00000508930 KIF16BQ96L93 1317 aa17.78■□□□□ 0.44
TRIM41-204ENST00000508930 NUCB1Q02818 461 aa17.78■□□□□ 0.44
TRIM41-204ENST00000508930 ARID3AQ99856 593 aa17.78■□□□□ 0.44
TRIM41-204ENST00000508930 IQGAP1P46940 1657 aa17.77■□□□□ 0.44
TRIM41-204ENST00000508930 TMEM132EQ6IEE7 984 aa17.77■□□□□ 0.44
TRIM41-204ENST00000508930 SAFB2Q14151 953 aaKnown RBP eCLIP17.77■□□□□ 0.43
TRIM41-204ENST00000508930 CAVIN1Q6NZI2 390 aaKnown RBP17.77■□□□□ 0.43
TRIM41-204ENST00000508930 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.43
TRIM41-204ENST00000508930 RTEL1-TNFRSF6BF6WH68 1400 aa17.77■□□□□ 0.43
TRIM41-204ENST00000508930 TMPOP42166 694 aaKnown RBP17.76■□□□□ 0.43
TRIM41-204ENST00000508930 RIPK4P57078 832 aa17.76■□□□□ 0.43
TRIM41-204ENST00000508930 C1orf115Q9H7X2 142 aa17.76■□□□□ 0.43
TRIM41-204ENST00000508930 ZBTB40Q9NUA8 1239 aa17.76■□□□□ 0.43
TRIM41-204ENST00000508930 PODXL2Q9NZ53 605 aa17.75■□□□□ 0.43
TRIM41-204ENST00000508930 BMP2KLQ5H9B9 411 aa17.75■□□□□ 0.43
TRIM41-204ENST00000508930 GAS2L2Q8NHY3 880 aa17.75■□□□□ 0.43
TRIM41-204ENST00000508930 BAG4O95429 457 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms