RNA–Protein interactions for RNA: ENST00000508383.1

SLF1-208, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 3

Gene SLF1, Length 328 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-208ENST00000508383 MST1RQ04912 1400 aa11.25□□□□□ -0.61
SLF1-208ENST00000508383 ZNF326Q5BKZ1 582 aaKnown RBP11.23□□□□□ -0.61
SLF1-208ENST00000508383 METP08581 1390 aa11.23□□□□□ -0.61
SLF1-208ENST00000508383 ADGRL3Q9HAR2 1447 aa11.23□□□□□ -0.61
SLF1-208ENST00000508383 PPLO60437 1756 aa11.23□□□□□ -0.61
SLF1-208ENST00000508383 LAMC1P11047 1609 aa11.22□□□□□ -0.61
SLF1-208ENST00000508383 ZNF772Q68DY9 489 aaPredicted RBP11.22□□□□□ -0.61
SLF1-208ENST00000508383 PPARGC1BQ86YN6 1023 aaKnown RBP11.22□□□□□ -0.61
SLF1-208ENST00000508383 SETD5Q9C0A6 1442 aa11.22□□□□□ -0.61
SLF1-208ENST00000508383 SPDYE2BA6NHP3 402 aa11.21□□□□□ -0.61
SLF1-208ENST00000508383 SPDYE6P0CI01 402 aa11.21□□□□□ -0.61
SLF1-208ENST00000508383 SPDYE2Q495Y8 402 aa11.21□□□□□ -0.61
SLF1-208ENST00000508383 NUTM2BA6NNL0 878 aaPredicted RBP11.2□□□□□ -0.62
SLF1-208ENST00000508383 NUTM2EB1AL46 878 aaPredicted RBP11.2□□□□□ -0.62
SLF1-208ENST00000508383 NUTM2AQ8IVF1 878 aaPredicted RBP11.2□□□□□ -0.62
SLF1-208ENST00000508383 TRIM52Q96A61 297 aa11.2□□□□□ -0.62
SLF1-208ENST00000508383 CDK12Q9NYV4 1490 aaPredicted RBP11.19□□□□□ -0.62
SLF1-208ENST00000508383 NAIPQ13075 1403 aa11.19□□□□□ -0.62
SLF1-208ENST00000508383 ATXN8OSP0DMR3 200 aa11.19□□□□□ -0.62
SLF1-208ENST00000508383 RRBP1Q9P2E9 1410 aaKnown RBP11.18□□□□□ -0.62
SLF1-208ENST00000508383 EP400Q96L91 3159 aa11.18□□□□□ -0.62
SLF1-208ENST00000508383 PTCH1Q13635 1447 aa11.18□□□□□ -0.62
SLF1-208ENST00000508383 PNPLA6Q8IY17 1366 aa11.17□□□□□ -0.62
SLF1-208ENST00000508383 AFF2P51816 1311 aa11.17□□□□□ -0.62
SLF1-208ENST00000508383 UPF1Q92900 1129 aaKnown RBP eCLIP11.17□□□□□ -0.62
SLF1-208ENST00000508383 IFT172Q9UG01 1749 aa11.17□□□□□ -0.62
SLF1-208ENST00000508383 MARF1Q9Y4F3 1742 aaKnown RBP11.17□□□□□ -0.62
SLF1-208ENST00000508383 C1orf167Q5SNV9 1468 aa11.17□□□□□ -0.62
SLF1-208ENST00000508383 RXRBP28702 533 aa11.16□□□□□ -0.62
SLF1-208ENST00000508383 DDX17Q92841 729 aaKnown RBP11.16□□□□□ -0.62
SLF1-208ENST00000508383 LRRC59Q96AG4 307 aaKnown RBP11.16□□□□□ -0.62
SLF1-208ENST00000508383 COL22A1Q8NFW1 1626 aaPredicted RBP11.16□□□□□ -0.62
SLF1-208ENST00000508383 SRCAPQ6ZRS2 3230 aa11.16□□□□□ -0.62
SLF1-208ENST00000508383 RGS12O14924 1447 aa11.15□□□□□ -0.62
SLF1-208ENST00000508383 PRAG1Q86YV5 1406 aa11.15□□□□□ -0.62
SLF1-208ENST00000508383 CDC42BPGQ6DT37 1551 aa11.14□□□□□ -0.63
SLF1-208ENST00000508383 ROBO2Q9HCK4 1378 aa11.14□□□□□ -0.63
SLF1-208ENST00000508383 KNDC1Q76NI1 1749 aa11.13□□□□□ -0.63
SLF1-208ENST00000508383 HFM1A2PYH4 1435 aa11.13□□□□□ -0.63
SLF1-208ENST00000508383 C8orf37Q96NL8 207 aa11.13□□□□□ -0.63
SLF1-208ENST00000508383 VGFO15240 615 aaPredicted RBP11.11□□□□□ -0.63
SLF1-208ENST00000508383 RBM6P78332 1123 aaKnown RBP11.1□□□□□ -0.63
SLF1-208ENST00000508383 SPDYE1Q8NFV5 336 aaPredicted RBP11.1□□□□□ -0.63
SLF1-208ENST00000508383 ORAI2Q96SN7 254 aa11.1□□□□□ -0.63
SLF1-208ENST00000508383 SOS2Q07890 1332 aaPredicted RBP11.09□□□□□ -0.63
SLF1-208ENST00000508383 RPGRIP1LQ68CZ1 1315 aa11.09□□□□□ -0.63
SLF1-208ENST00000508383 FMN2Q9NZ56 1722 aa11.09□□□□□ -0.63
SLF1-208ENST00000508383 RGPD8O14715 1765 aaPredicted RBP11.09□□□□□ -0.63
SLF1-208ENST00000508383 ADAMTS2O95450 1211 aa11.09□□□□□ -0.63
SLF1-208ENST00000508383 QTRT2Q9H974 415 aaKnown RBP11.09□□□□□ -0.63
SLF1-208ENST00000508383 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.09□□□□□ -0.63
SLF1-208ENST00000508383 PXDNQ92626 1479 aa11.08□□□□□ -0.64
SLF1-208ENST00000508383 NGLY1Q96IV0 654 aa11.08□□□□□ -0.64
SLF1-208ENST00000508383 KIF1AQ12756 1690 aa11.08□□□□□ -0.64
SLF1-208ENST00000508383 MYOM2P54296 1465 aa11.07□□□□□ -0.64
SLF1-208ENST00000508383 EVX2Q03828 476 aa11.07□□□□□ -0.64
SLF1-208ENST00000508383 PRKAR2AP13861 404 aaKnown RBP11.06□□□□□ -0.64
SLF1-208ENST00000508383 CCDC144AA2RUR9 1427 aa11.06□□□□□ -0.64
SLF1-208ENST00000508383 TECPR2O15040 1411 aa11.06□□□□□ -0.64
SLF1-208ENST00000508383 ATRNO75882 1429 aa11.05□□□□□ -0.64
SLF1-208ENST00000508383 SPATA31E1Q6ZUB1 1445 aa11.05□□□□□ -0.64
SLF1-208ENST00000508383 ABCA3Q99758 1704 aa11.05□□□□□ -0.64
SLF1-208ENST00000508383 USP21Q9UK80 565 aa11.05□□□□□ -0.64
SLF1-208ENST00000508383 NPHP3Q7Z494 1330 aa11.05□□□□□ -0.64
SLF1-208ENST00000508383 ATAD2Q6PL18 1390 aa11.04□□□□□ -0.64
SLF1-208ENST00000508383 ESCO1Q5FWF5 840 aa11.04□□□□□ -0.64
SLF1-208ENST00000508383 BRWD3Q6RI45 1802 aa11.04□□□□□ -0.64
SLF1-208ENST00000508383 ADGRF5Q8IZF2 1346 aa11.04□□□□□ -0.64
SLF1-208ENST00000508383 PIK3C2GO75747 1445 aa11.03□□□□□ -0.64
SLF1-208ENST00000508383 USP32Q8NFA0 1604 aa11.03□□□□□ -0.64
SLF1-208ENST00000508383 C19orf67A6NJJ6 358 aa11.03□□□□□ -0.64
SLF1-208ENST00000508383 TRPC5Q9UL62 973 aaPredicted RBP11.03□□□□□ -0.64
SLF1-208ENST00000508383 PLCH1Q4KWH8 1693 aa11.03□□□□□ -0.64
SLF1-208ENST00000508383 BCL9LQ86UU0 1499 aa11.02□□□□□ -0.65
SLF1-208ENST00000508383 XPCQ01831 940 aaPredicted RBP11.02□□□□□ -0.65
SLF1-208ENST00000508383 FNBP4Q8N3X1 1017 aaPredicted RBP11.02□□□□□ -0.65
SLF1-208ENST00000508383 LRPPRCP42704 1394 aaKnown RBP11.02□□□□□ -0.65
SLF1-208ENST00000508383 ANKRD30BQ9BXX2 1392 aa11.02□□□□□ -0.65
SLF1-208ENST00000508383 NUTM2FA1L443 756 aa11.01□□□□□ -0.65
SLF1-208ENST00000508383 FOXO3O43524 673 aa11.01□□□□□ -0.65
SLF1-208ENST00000508383 RGL3Q3MIN7 710 aa11.01□□□□□ -0.65
SLF1-208ENST00000508383 WAPLQ7Z5K2 1190 aa11.01□□□□□ -0.65
SLF1-208ENST00000508383 STK26Q9P289 416 aa11.01□□□□□ -0.65
SLF1-208ENST00000508383 GLI3P10071 1580 aa11.01□□□□□ -0.65
SLF1-208ENST00000508383 PLEKHH1Q9ULM0 1364 aa11.01□□□□□ -0.65
SLF1-208ENST00000508383 NWD2Q9ULI1 1742 aa11□□□□□ -0.65
SLF1-208ENST00000508383 ABCC11Q96J66 1382 aa11□□□□□ -0.65
SLF1-208ENST00000508383 YTHDC2Q9H6S0 1430 aaKnown RBP11□□□□□ -0.65
SLF1-208ENST00000508383 TMEM132EQ6IEE7 984 aa10.99□□□□□ -0.65
SLF1-208ENST00000508383 SLIT2O94813 1529 aa10.98□□□□□ -0.65
SLF1-208ENST00000508383 MPHOSPH9Q99550 1183 aa10.97□□□□□ -0.65
SLF1-208ENST00000508383 CLEC11AQ9Y240 323 aa10.97□□□□□ -0.65
SLF1-208ENST00000508383 SSUH2Q9Y2M2 353 aa10.97□□□□□ -0.65
SLF1-208ENST00000508383 RALGAPBQ86X10 1494 aa10.97□□□□□ -0.65
SLF1-208ENST00000508383 NRXN1Q9ULB1 1477 aa10.97□□□□□ -0.65
SLF1-208ENST00000508383 NRAPQ86VF7 1730 aa10.96□□□□□ -0.65
SLF1-208ENST00000508383 TRPM3Q9HCF6 1732 aaPredicted RBP10.96□□□□□ -0.65
SLF1-208ENST00000508383 ADGRB2O60241 1585 aa10.96□□□□□ -0.65
SLF1-208ENST00000508383 TNS3Q68CZ2 1445 aa10.96□□□□□ -0.65
SLF1-208ENST00000508383 SPATA31A3Q5VYP0 1347 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms