RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 MMP16P51512 607 aa12.39□□□□□ -0.43
TRAPPC13-209ENST00000508304 DACH1Q9UI36 760 aa12.38□□□□□ -0.43
TRAPPC13-209ENST00000508304 KDM4AO75164 1064 aa12.37□□□□□ -0.43
TRAPPC13-209ENST00000508304 IRF6O14896 467 aa12.36□□□□□ -0.43
TRAPPC13-209ENST00000508304 CTC1Q2NKJ3 1217 aa12.36□□□□□ -0.43
TRAPPC13-209ENST00000508304 SMCPP49901 116 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC13-209ENST00000508304 WNT7AO00755 349 aa12.34□□□□□ -0.43
TRAPPC13-209ENST00000508304 AXIN1O15169 862 aa12.34□□□□□ -0.43
TRAPPC13-209ENST00000508304 TRIM32Q13049 653 aa12.34□□□□□ -0.43
TRAPPC13-209ENST00000508304 USB1Q9BQ65 265 aaKnown RBP12.34□□□□□ -0.43
TRAPPC13-209ENST00000508304 DXOO77932 396 aaKnown RBP12.33□□□□□ -0.44
TRAPPC13-209ENST00000508304 MDM2Q00987 491 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC13-209ENST00000508304 LCE2AQ5TA79 106 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC13-209ENST00000508304 TTC24A2A3L6 582 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC13-209ENST00000508304 USP46P62068 366 aa12.32□□□□□ -0.44
TRAPPC13-209ENST00000508304 MINK1Q8N4C8 1332 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC13-209ENST00000508304 TREML4Q6UXN2 200 aa12.31□□□□□ -0.44
TRAPPC13-209ENST00000508304 HLA-CQ95604 372 aa12.31□□□□□ -0.44
TRAPPC13-209ENST00000508304 GMPR2Q9P2T1 348 aaKnown RBP12.31□□□□□ -0.44
TRAPPC13-209ENST00000508304 SNIP1Q8TAD8 396 aaKnown RBP12.3□□□□□ -0.44
TRAPPC13-209ENST00000508304 HOXA2O43364 376 aa12.29□□□□□ -0.44
TRAPPC13-209ENST00000508304 SMPD1P17405 629 aa12.29□□□□□ -0.44
TRAPPC13-209ENST00000508304 TULP1O00294 542 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC13-209ENST00000508304 CCDC102AQ96A19 550 aa12.28□□□□□ -0.44
TRAPPC13-209ENST00000508304 MRGPRX2Q96LB1 330 aa12.28□□□□□ -0.44
TRAPPC13-209ENST00000508304 C11orf95C9JLR9 678 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC13-209ENST00000508304 GPCPD1Q9NPB8 672 aa12.25□□□□□ -0.45
TRAPPC13-209ENST00000508304 REPIN1Q9BWE0 567 aaKnown RBP12.24□□□□□ -0.45
TRAPPC13-209ENST00000508304 J3QL48 77 aa12.23□□□□□ -0.45
TRAPPC13-209ENST00000508304 GUCA2AQ02747 115 aa12.23□□□□□ -0.45
TRAPPC13-209ENST00000508304 FAM217BQ9NTX9 383 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC13-209ENST00000508304 CLCN1P35523 988 aa12.22□□□□□ -0.45
TRAPPC13-209ENST00000508304 VSIG10Q8N0Z9 540 aa12.22□□□□□ -0.45
TRAPPC13-209ENST00000508304 CCDC24Q8N4L8 307 aa12.22□□□□□ -0.45
TRAPPC13-209ENST00000508304 SKOR1P84550 965 aa12.21□□□□□ -0.45
TRAPPC13-209ENST00000508304 JUNDP17535 347 aa12.2□□□□□ -0.46
TRAPPC13-209ENST00000508304 WNT7BP56706 349 aa12.2□□□□□ -0.46
TRAPPC13-209ENST00000508304 RC3H1Q5TC82 1133 aaKnown RBP12.2□□□□□ -0.46
TRAPPC13-209ENST00000508304 ATP13A2Q9NQ11 1180 aa12.2□□□□□ -0.46
TRAPPC13-209ENST00000508304 SYMPKQ92797 1274 aaKnown RBP12.19□□□□□ -0.46
TRAPPC13-209ENST00000508304 WFS1O76024 890 aa12.17□□□□□ -0.46
TRAPPC13-209ENST00000508304 HPS1Q92902 700 aa12.17□□□□□ -0.46
TRAPPC13-209ENST00000508304 NFX1Q12986 1120 aaKnown RBP12.16□□□□□ -0.46
TRAPPC13-209ENST00000508304 RETREG3Q86VR2 466 aa12.16□□□□□ -0.46
TRAPPC13-209ENST00000508304 NUTM1Q86Y26 1132 aa12.16□□□□□ -0.46
TRAPPC13-209ENST00000508304 TRIM47Q96LD4 638 aa12.14□□□□□ -0.47
TRAPPC13-209ENST00000508304 SNRPBP14678 240 aaKnown RBP12.13□□□□□ -0.47
TRAPPC13-209ENST00000508304 NUDT12Q9BQG2 462 aa12.13□□□□□ -0.47
TRAPPC13-209ENST00000508304 PCDHGC3Q9UN70 934 aa12.13□□□□□ -0.47
TRAPPC13-209ENST00000508304 PTCRAQ6ISU1 281 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC13-209ENST00000508304 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAPPC13-209ENST00000508304 KRI1Q8N9T8 703 aaKnown RBP12.12□□□□□ -0.47
TRAPPC13-209ENST00000508304 SENP2Q9HC62 589 aa12.12□□□□□ -0.47
TRAPPC13-209ENST00000508304 FDX1P10109 184 aa12.11□□□□□ -0.47
TRAPPC13-209ENST00000508304 SIAH2O43255 324 aa12.1□□□□□ -0.47
TRAPPC13-209ENST00000508304 WIPF1O43516 503 aa12.08□□□□□ -0.48
TRAPPC13-209ENST00000508304 ALDH1A1P00352 501 aa12.08□□□□□ -0.48
TRAPPC13-209ENST00000508304 SSTR3P32745 418 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC13-209ENST00000508304 C6orf229H3BNL8 230 aa12.07□□□□□ -0.48
TRAPPC13-209ENST00000508304 SPIRE2Q8WWL2 714 aa12.07□□□□□ -0.48
TRAPPC13-209ENST00000508304 KIFC2Q96AC6 838 aa12.07□□□□□ -0.48
TRAPPC13-209ENST00000508304 LCE2CQ5TA81 110 aa12.06□□□□□ -0.48
TRAPPC13-209ENST00000508304 TERTO14746 1132 aaKnown RBP12.05□□□□□ -0.48
TRAPPC13-209ENST00000508304 CCNYL3P0C7X3 344 aa12.05□□□□□ -0.48
TRAPPC13-209ENST00000508304 MS4A1P11836 297 aa12.05□□□□□ -0.48
TRAPPC13-209ENST00000508304 EHBP1Q8NDI1 1231 aa12.05□□□□□ -0.48
TRAPPC13-209ENST00000508304 SH3BP2P78314 561 aa12.04□□□□□ -0.48
TRAPPC13-209ENST00000508304 NDUFV2P19404 249 aa12.03□□□□□ -0.48
TRAPPC13-209ENST00000508304 PTPRNQ16849 979 aa12.03□□□□□ -0.48
TRAPPC13-209ENST00000508304 BARGINQ6ZT62 677 aa12.02□□□□□ -0.49
TRAPPC13-209ENST00000508304 EVA1BQ9NVM1 165 aa12.02□□□□□ -0.49
TRAPPC13-209ENST00000508304 MOXD2PA6NHM9 499 aa12.01□□□□□ -0.49
TRAPPC13-209ENST00000508304 AMHR2Q16671 573 aa12.01□□□□□ -0.49
TRAPPC13-209ENST00000508304 UNC93B1Q9H1C4 597 aa12.01□□□□□ -0.49
TRAPPC13-209ENST00000508304 ZMYND10O75800 440 aa11.99□□□□□ -0.49
TRAPPC13-209ENST00000508304 TTLL12Q14166 644 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC13-209ENST00000508304 WASF2Q9Y6W5 498 aa11.99□□□□□ -0.49
TRAPPC13-209ENST00000508304 INSM1Q01101 510 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC13-209ENST00000508304 KCNH2Q12809 1159 aa11.98□□□□□ -0.49
TRAPPC13-209ENST00000508304 TRIM46Q7Z4K8 759 aa11.98□□□□□ -0.49
TRAPPC13-209ENST00000508304 PRR7Q8TB68 274 aa11.98□□□□□ -0.49
TRAPPC13-209ENST00000508304 STK17AQ9UEE5 414 aa11.98□□□□□ -0.49
TRAPPC13-209ENST00000508304 CAPN5O15484 640 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC13-209ENST00000508304 MTMR2Q13614 643 aa11.97□□□□□ -0.49
TRAPPC13-209ENST00000508304 DESI1Q6ICB0 168 aa11.97□□□□□ -0.49
TRAPPC13-209ENST00000508304 GIGYF2Q6Y7W6 1299 aaKnown RBP11.97□□□□□ -0.49
TRAPPC13-209ENST00000508304 SPDYE5A6NIY4 337 aa11.96□□□□□ -0.49
TRAPPC13-209ENST00000508304 BMP1P13497 986 aa11.96□□□□□ -0.49
TRAPPC13-209ENST00000508304 BAP1Q92560 729 aa11.96□□□□□ -0.49
TRAPPC13-209ENST00000508304 LINC01559Q495D7 138 aa11.95□□□□□ -0.5
TRAPPC13-209ENST00000508304 ZNF511Q8NB15 262 aa11.94□□□□□ -0.5
TRAPPC13-209ENST00000508304 TLL2Q9Y6L7 1015 aa11.94□□□□□ -0.5
TRAPPC13-209ENST00000508304 GJA5P36382 358 aa11.93□□□□□ -0.5
TRAPPC13-209ENST00000508304 MPNDQ8N594 471 aa11.93□□□□□ -0.5
TRAPPC13-209ENST00000508304 ZC3H15Q8WU90 426 aaKnown RBP11.93□□□□□ -0.5
TRAPPC13-209ENST00000508304 BEGAINQ9BUH8 593 aa11.93□□□□□ -0.5
TRAPPC13-209ENST00000508304 VARSP26640 1264 aaKnown RBP11.91□□□□□ -0.5
TRAPPC13-209ENST00000508304 NXF1Q9UBU9 619 aaKnown RBP11.91□□□□□ -0.5
TRAPPC13-209ENST00000508304 RSBN1LQ6PCB5 846 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC13-209ENST00000508304 TBC1D2Q9BYX2 928 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms