RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 ACIN1Q9UKV3 1341 aaKnown RBP11.92□□□□□ -0.5
UBE2D3-222ENST00000508238 TRPM2O94759 1503 aa11.92□□□□□ -0.5
UBE2D3-222ENST00000508238 ZNF326Q5BKZ1 582 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-222ENST00000508238 MSH6P52701 1360 aa11.9□□□□□ -0.5
UBE2D3-222ENST00000508238 CLTCL1P53675 1640 aa11.89□□□□□ -0.51
UBE2D3-222ENST00000508238 RPGRIP1LQ68CZ1 1315 aa11.89□□□□□ -0.51
UBE2D3-222ENST00000508238 SETBP1Q9Y6X0 1596 aa11.89□□□□□ -0.51
UBE2D3-222ENST00000508238 KIF1BO60333 1816 aa11.89□□□□□ -0.51
UBE2D3-222ENST00000508238 RBM33Q96EV2 1170 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-222ENST00000508238 DCAF8Q5TAQ9 597 aa11.88□□□□□ -0.51
UBE2D3-222ENST00000508238 ILDR2Q71H61 639 aa11.88□□□□□ -0.51
UBE2D3-222ENST00000508238 C19orf44Q9H6X5 657 aa11.88□□□□□ -0.51
UBE2D3-222ENST00000508238 SLAIN2Q9P270 581 aa11.88□□□□□ -0.51
UBE2D3-222ENST00000508238 AMOTL2Q9Y2J4 779 aa11.88□□□□□ -0.51
UBE2D3-222ENST00000508238 FARP1Q9Y4F1 1045 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-222ENST00000508238 NRXN3Q9Y4C0 1643 aa11.87□□□□□ -0.51
UBE2D3-222ENST00000508238 VGFO15240 615 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-222ENST00000508238 GSE1Q14687 1217 aa11.87□□□□□ -0.51
UBE2D3-222ENST00000508238 MPHOSPH9Q99550 1183 aa11.87□□□□□ -0.51
UBE2D3-222ENST00000508238 PTPRUQ92729 1446 aa11.86□□□□□ -0.51
UBE2D3-222ENST00000508238 NEXMIFQ5QGS0 1516 aa11.86□□□□□ -0.51
UBE2D3-222ENST00000508238 RASEFQ8IZ41 740 aa11.86□□□□□ -0.51
UBE2D3-222ENST00000508238 METP08581 1390 aa11.85□□□□□ -0.51
UBE2D3-222ENST00000508238 CADPS2Q86UW7 1296 aa11.85□□□□□ -0.51
UBE2D3-222ENST00000508238 FAM212AQ96EL1 285 aa11.84□□□□□ -0.51
UBE2D3-222ENST00000508238 SETD5Q9C0A6 1442 aa11.84□□□□□ -0.51
UBE2D3-222ENST00000508238 EVX2Q03828 476 aa11.83□□□□□ -0.52
UBE2D3-222ENST00000508238 MED1Q15648 1581 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-222ENST00000508238 XRN1Q8IZH2 1706 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-222ENST00000508238 ROBO1Q9Y6N7 1651 aa11.82□□□□□ -0.52
UBE2D3-222ENST00000508238 SOCS7O14512 581 aa11.82□□□□□ -0.52
UBE2D3-222ENST00000508238 ATF3P18847 181 aa11.82□□□□□ -0.52
UBE2D3-222ENST00000508238 C14orf37Q86TY3 774 aa11.82□□□□□ -0.52
UBE2D3-222ENST00000508238 CCDC144AA2RUR9 1427 aa11.82□□□□□ -0.52
UBE2D3-222ENST00000508238 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-222ENST00000508238 DCCP43146 1447 aa11.81□□□□□ -0.52
UBE2D3-222ENST00000508238 SPATA31E1Q6ZUB1 1445 aa11.81□□□□□ -0.52
UBE2D3-222ENST00000508238 HRCP23327 699 aa11.81□□□□□ -0.52
UBE2D3-222ENST00000508238 PRAG1Q86YV5 1406 aa11.8□□□□□ -0.52
UBE2D3-222ENST00000508238 RGL2O15211 777 aa11.8□□□□□ -0.52
UBE2D3-222ENST00000508238 PPLO60437 1756 aa11.79□□□□□ -0.52
UBE2D3-222ENST00000508238 ANKRD30BQ9BXX2 1392 aa11.79□□□□□ -0.52
UBE2D3-222ENST00000508238 RAB3GAP2Q9H2M9 1393 aa11.78□□□□□ -0.52
UBE2D3-222ENST00000508238 PTCH1Q13635 1447 aa11.77□□□□□ -0.52
UBE2D3-222ENST00000508238 SETD1AO15047 1707 aaKnown RBP11.77□□□□□ -0.52
UBE2D3-222ENST00000508238 ADGRL3Q9HAR2 1447 aa11.77□□□□□ -0.53
UBE2D3-222ENST00000508238 RGL3Q3MIN7 710 aa11.76□□□□□ -0.53
UBE2D3-222ENST00000508238 BRINP3Q76B58 766 aa11.76□□□□□ -0.53
UBE2D3-222ENST00000508238 TSPYL2Q9H2G4 693 aaPredicted RBP11.76□□□□□ -0.53
UBE2D3-222ENST00000508238 ADGRF5Q8IZF2 1346 aa11.76□□□□□ -0.53
UBE2D3-222ENST00000508238 JCADQ9P266 1359 aa11.76□□□□□ -0.53
UBE2D3-222ENST00000508238 RGS17Q9UGC6 210 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-222ENST00000508238 ROBO2Q9HCK4 1378 aa11.75□□□□□ -0.53
UBE2D3-222ENST00000508238 MST1RQ04912 1400 aa11.75□□□□□ -0.53
UBE2D3-222ENST00000508238 AHDC1Q5TGY3 1603 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-222ENST00000508238 PHLPP1O60346 1717 aa11.74□□□□□ -0.53
UBE2D3-222ENST00000508238 COL16A1Q07092 1604 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-222ENST00000508238 IFT172Q9UG01 1749 aa11.73□□□□□ -0.53
UBE2D3-222ENST00000508238 TECPR2O15040 1411 aa11.72□□□□□ -0.53
UBE2D3-222ENST00000508238 PIK3C2GO75747 1445 aa11.72□□□□□ -0.53
UBE2D3-222ENST00000508238 ABCC11Q96J66 1382 aa11.72□□□□□ -0.53
UBE2D3-222ENST00000508238 SPATA31A6Q5VVP1 1343 aa11.72□□□□□ -0.53
UBE2D3-222ENST00000508238 C14orf93Q9H972 538 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-222ENST00000508238 LRPPRCP42704 1394 aaKnown RBP11.71□□□□□ -0.53
UBE2D3-222ENST00000508238 SIRT1Q96EB6 747 aa11.71□□□□□ -0.53
UBE2D3-222ENST00000508238 ASXL1Q8IXJ9 1541 aa11.7□□□□□ -0.54
UBE2D3-222ENST00000508238 NRXN1Q9ULB1 1477 aa11.7□□□□□ -0.54
UBE2D3-222ENST00000508238 NALCNQ8IZF0 1738 aa11.7□□□□□ -0.54
UBE2D3-222ENST00000508238 STAC3Q96MF2 364 aa11.7□□□□□ -0.54
UBE2D3-222ENST00000508238 C1orf167Q5SNV9 1468 aa11.7□□□□□ -0.54
UBE2D3-222ENST00000508238 PYGBP11216 843 aa11.69□□□□□ -0.54
UBE2D3-222ENST00000508238 LRRC59Q96AG4 307 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-222ENST00000508238 MYOM2P54296 1465 aa11.69□□□□□ -0.54
UBE2D3-222ENST00000508238 CHRM1P11229 460 aaPredicted RBP11.68□□□□□ -0.54
UBE2D3-222ENST00000508238 TMEM132EQ6IEE7 984 aa11.68□□□□□ -0.54
UBE2D3-222ENST00000508238 RNF25Q96BH1 459 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-222ENST00000508238 STK26Q9P289 416 aa11.67□□□□□ -0.54
UBE2D3-222ENST00000508238 SHPRHQ149N8 1683 aa11.67□□□□□ -0.54
UBE2D3-222ENST00000508238 YTHDC2Q9H6S0 1430 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-222ENST00000508238 LAMC1P11047 1609 aa11.67□□□□□ -0.54
UBE2D3-222ENST00000508238 NHSL1Q5SYE7 1610 aa11.67□□□□□ -0.54
UBE2D3-222ENST00000508238 POTEAQ6S8J7 498 aa11.66□□□□□ -0.54
UBE2D3-222ENST00000508238 WAPLQ7Z5K2 1190 aa11.66□□□□□ -0.54
UBE2D3-222ENST00000508238 ORAI2Q96SN7 254 aa11.66□□□□□ -0.54
UBE2D3-222ENST00000508238 SOS2Q07890 1332 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-222ENST00000508238 CFAP70Q5T0N1 1121 aa11.65□□□□□ -0.54
UBE2D3-222ENST00000508238 CDC42BPGQ6DT37 1551 aa11.65□□□□□ -0.54
UBE2D3-222ENST00000508238 KNDC1Q76NI1 1749 aa11.65□□□□□ -0.54
UBE2D3-222ENST00000508238 DHX57Q6P158 1386 aaKnown RBP11.65□□□□□ -0.55
UBE2D3-222ENST00000508238 C19orf67A6NJJ6 358 aa11.64□□□□□ -0.55
UBE2D3-222ENST00000508238 PAK3O75914 559 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-222ENST00000508238 DDX17Q92841 729 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-222ENST00000508238 LRP6O75581 1613 aa11.64□□□□□ -0.55
UBE2D3-222ENST00000508238 RIOK3O14730 519 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-222ENST00000508238 PLEKHH1Q9ULM0 1364 aa11.63□□□□□ -0.55
UBE2D3-222ENST00000508238 ESCO1Q5FWF5 840 aa11.62□□□□□ -0.55
UBE2D3-222ENST00000508238 ZNF772Q68DY9 489 aaPredicted RBP11.62□□□□□ -0.55
UBE2D3-222ENST00000508238 DCAF11Q8TEB1 546 aa11.62□□□□□ -0.55
UBE2D3-222ENST00000508238 CCDC61Q9Y6R9 512 aa11.62□□□□□ -0.55
UBE2D3-222ENST00000508238 PNPLA6Q8IY17 1366 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms