RNA–Protein interactions for RNA: ENST00000508164.5

TSPAN17-207, Transcript of tetraspanin 17, humanhuman

TSL 1 (best) BASIC

Gene TSPAN17, Length 2,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-207ENST00000508164 TCP11L2Q8N4U5 519 aa27.77■■■□□ 2.04
TSPAN17-207ENST00000508164 SHPRHQ149N8 1683 aa27.77■■■□□ 2.04
TSPAN17-207ENST00000508164 PDE3AQ14432 1141 aa27.77■■■□□ 2.04
TSPAN17-207ENST00000508164 NGEFQ8N5V2 710 aa27.77■■■□□ 2.04
TSPAN17-207ENST00000508164 NPATQ14207 1427 aa27.76■■■□□ 2.03
TSPAN17-207ENST00000508164 CGNL1Q0VF96 1302 aa27.76■■■□□ 2.03
TSPAN17-207ENST00000508164 CLUAP1Q96AJ1 413 aa27.76■■■□□ 2.03
TSPAN17-207ENST00000508164 TNNQ9UQP3 1299 aa27.76■■■□□ 2.03
TSPAN17-207ENST00000508164 MTHFSP49914 203 aa27.75■■■□□ 2.03
TSPAN17-207ENST00000508164 RUNDC1Q96C34 613 aa27.75■■■□□ 2.03
TSPAN17-207ENST00000508164 BCL2L13Q9BXK5 485 aa27.74■■■□□ 2.03
TSPAN17-207ENST00000508164 SENP3Q9H4L4 574 aaPredicted RBP27.74■■■□□ 2.03
TSPAN17-207ENST00000508164 QRICH2Q9H0J4 1663 aa27.74■■■□□ 2.03
TSPAN17-207ENST00000508164 LMTK2Q8IWU2 1503 aa27.73■■■□□ 2.03
TSPAN17-207ENST00000508164 SETBP1Q9Y6X0 1596 aa27.73■■■□□ 2.03
TSPAN17-207ENST00000508164 IL27Q8NEV9 243 aa27.72■■■□□ 2.03
TSPAN17-207ENST00000508164 ZNF518AQ6AHZ1 1483 aa27.72■■■□□ 2.03
TSPAN17-207ENST00000508164 RARSP54136 660 aaKnown RBP27.72■■■□□ 2.03
TSPAN17-207ENST00000508164 ADGRB1O14514 1584 aa27.7■■■□□ 2.03
TSPAN17-207ENST00000508164 PPLO60437 1756 aa27.7■■■□□ 2.03
TSPAN17-207ENST00000508164 ZC3H13Q5T200 1668 aaKnown RBP27.69■■■□□ 2.02
TSPAN17-207ENST00000508164 SEC24BO95487 1268 aa27.69■■■□□ 2.02
TSPAN17-207ENST00000508164 RLBP1P12271 317 aa27.69■■■□□ 2.02
TSPAN17-207ENST00000508164 SAFB2Q14151 953 aaKnown RBP eCLIP27.67■■■□□ 2.02
TSPAN17-207ENST00000508164 IQSEC2Q5JU85 1478 aa27.66■■■□□ 2.02
TSPAN17-207ENST00000508164 USP19O94966 1318 aa27.66■■■□□ 2.02
TSPAN17-207ENST00000508164 PHF23Q9BUL5 403 aaPredicted RBP27.65■■■□□ 2.02
TSPAN17-207ENST00000508164 FRMPD1Q5SYB0 1578 aa27.65■■■□□ 2.02
TSPAN17-207ENST00000508164 PCDHB15Q9Y5E8 787 aa27.64■■■□□ 2.02
TSPAN17-207ENST00000508164 CABP2Q9NPB3 220 aa27.64■■■□□ 2.01
TSPAN17-207ENST00000508164 NINLQ9Y2I6 1382 aa27.63■■■□□ 2.01
TSPAN17-207ENST00000508164 PRKCSHP14314 528 aaPredicted RBP27.62■■■□□ 2.01
TSPAN17-207ENST00000508164 U2AF1L5P0DN76 240 aaPredicted RBP27.62■■■□□ 2.01
TSPAN17-207ENST00000508164 U2AF1Q01081 240 aaKnown RBP eCLIP27.62■■■□□ 2.01
TSPAN17-207ENST00000508164 WDR63Q8IWG1 891 aa27.62■■■□□ 2.01
TSPAN17-207ENST00000508164 CFAP53Q96M91 514 aa27.62■■■□□ 2.01
TSPAN17-207ENST00000508164 GSE1Q14687 1217 aa27.61■■■□□ 2.01
TSPAN17-207ENST00000508164 RTN4Q9NQC3 1192 aaKnown RBP27.61■■■□□ 2.01
TSPAN17-207ENST00000508164 FRAT2O75474 233 aaPredicted RBP27.6■■■□□ 2.01
TSPAN17-207ENST00000508164 POGZQ7Z3K3 1410 aa27.59■■■□□ 2.01
TSPAN17-207ENST00000508164 CD109Q6YHK3 1445 aa27.59■■■□□ 2.01
TSPAN17-207ENST00000508164 EVC2Q86UK5 1308 aa27.59■■■□□ 2.01
TSPAN17-207ENST00000508164 MAPK8IP3Q9UPT6 1336 aa27.59■■■□□ 2.01
TSPAN17-207ENST00000508164 NPM1P06748 294 aaKnown RBP eCLIP27.58■■■□□ 2.01
TSPAN17-207ENST00000508164 RPGRIP1LQ68CZ1 1315 aa27.58■■■□□ 2.01
TSPAN17-207ENST00000508164 VIRMAQ69YN4 1812 aaKnown RBP27.58■■■□□ 2
TSPAN17-207ENST00000508164 GLI2P10070 1586 aa27.57■■■□□ 2
TSPAN17-207ENST00000508164 TULP4Q9NRJ4 1543 aa27.57■■■□□ 2
TSPAN17-207ENST00000508164 ABCC3O15438 1527 aa27.56■■■□□ 2
TSPAN17-207ENST00000508164 RAPGEF3O95398 923 aa27.56■■■□□ 2
TSPAN17-207ENST00000508164 STK26Q9P289 416 aa27.56■■■□□ 2
TSPAN17-207ENST00000508164 PMFBP1Q8TBY8 1022 aa27.55■■■□□ 2
TSPAN17-207ENST00000508164 SIGLEC1Q9BZZ2 1709 aa27.54■■■□□ 2
TSPAN17-207ENST00000508164 ANKRD36BQ8N2N9 1353 aa27.54■■■□□ 2
TSPAN17-207ENST00000508164 CCDC27Q2M243 656 aa27.54■■■□□ 2
TSPAN17-207ENST00000508164 TSR2Q969E8 191 aaKnown RBP27.54■■■□□ 2
TSPAN17-207ENST00000508164 HECW2Q9P2P5 1572 aa27.54■■■□□ 2
TSPAN17-207ENST00000508164 USP32Q8NFA0 1604 aa27.53■■■□□ 2
TSPAN17-207ENST00000508164 MLH3Q9UHC1 1453 aa27.53■■■□□ 2
TSPAN17-207ENST00000508164 PDZRN3Q9UPQ7 1066 aa27.53■■■□□ 2
TSPAN17-207ENST00000508164 VGFO15240 615 aaPredicted RBP27.52■■■□□ 2
TSPAN17-207ENST00000508164 GGNBP2Q9H3C7 697 aa27.51■■■□□ 2
TSPAN17-207ENST00000508164 ARHGEF28Q8N1W1 1705 aaKnown RBP27.51■■□□□ 1.99
TSPAN17-207ENST00000508164 MYH16Q9H6N6 1097 aa27.51■■□□□ 1.99
TSPAN17-207ENST00000508164 U2SURPO15042 1029 aaKnown RBP27.5■■□□□ 1.99
TSPAN17-207ENST00000508164 BRPF3Q9ULD4 1205 aa27.49■■□□□ 1.99
TSPAN17-207ENST00000508164 SRPK2P78362 688 aaKnown RBP27.48■■□□□ 1.99
TSPAN17-207ENST00000508164 IDI1Q13907 227 aa27.48■■□□□ 1.99
TSPAN17-207ENST00000508164 CAMSAP1Q5T5Y3 1602 aa27.48■■□□□ 1.99
TSPAN17-207ENST00000508164 NEXMIFQ5QGS0 1516 aa27.47■■□□□ 1.99
TSPAN17-207ENST00000508164 A0A1W2PP64 1363 aa27.47■■□□□ 1.99
TSPAN17-207ENST00000508164 NLRP1Q9C000 1473 aa27.47■■□□□ 1.99
TSPAN17-207ENST00000508164 MVPQ14764 893 aaKnown RBP27.46■■□□□ 1.99
TSPAN17-207ENST00000508164 SLKQ9H2G2 1235 aaPredicted RBP27.45■■□□□ 1.98
TSPAN17-207ENST00000508164 RWDD1Q9H446 243 aaPredicted RBP27.45■■□□□ 1.98
TSPAN17-207ENST00000508164 NSD2O96028 1365 aa27.44■■□□□ 1.98
TSPAN17-207ENST00000508164 EXOSC9Q06265 439 aaKnown RBP27.44■■□□□ 1.98
TSPAN17-207ENST00000508164 FTSJ3Q8IY81 847 aaKnown RBP27.44■■□□□ 1.98
TSPAN17-207ENST00000508164 PUS7Q96PZ0 661 aaKnown RBP27.44■■□□□ 1.98
TSPAN17-207ENST00000508164 ZKSCAN2Q63HK3 967 aa27.44■■□□□ 1.98
TSPAN17-207ENST00000508164 AAMPQ13685 434 aa27.43■■□□□ 1.98
TSPAN17-207ENST00000508164 MINK1Q8N4C8 1332 aaPredicted RBP27.42■■□□□ 1.98
TSPAN17-207ENST00000508164 DZIP1LQ8IYY4 767 aaKnown RBP27.42■■□□□ 1.98
TSPAN17-207ENST00000508164 PLEKHF1Q96S99 279 aa27.42■■□□□ 1.98
TSPAN17-207ENST00000508164 SMC4Q9NTJ3 1288 aa27.42■■□□□ 1.98
TSPAN17-207ENST00000508164 TMPOP42166 694 aaKnown RBP27.41■■□□□ 1.98
TSPAN17-207ENST00000508164 TRIM35Q9UPQ4 493 aa27.41■■□□□ 1.98
TSPAN17-207ENST00000508164 PIK3C2BO00750 1634 aa27.41■■□□□ 1.98
TSPAN17-207ENST00000508164 ADGRB2O60241 1585 aa27.4■■□□□ 1.98
TSPAN17-207ENST00000508164 CFAP74Q9C0B2 1584 aa27.4■■□□□ 1.98
TSPAN17-207ENST00000508164 ABCC11Q96J66 1382 aa27.4■■□□□ 1.98
TSPAN17-207ENST00000508164 ANO8Q9HCE9 1232 aaPredicted RBP27.39■■□□□ 1.98
TSPAN17-207ENST00000508164 BECN1Q14457 450 aa27.39■■□□□ 1.97
TSPAN17-207ENST00000508164 SSH1Q8WYL5 1049 aa27.38■■□□□ 1.97
TSPAN17-207ENST00000508164 FYB1O15117 783 aa27.38■■□□□ 1.97
TSPAN17-207ENST00000508164 TRIM27P14373 513 aa27.38■■□□□ 1.97
TSPAN17-207ENST00000508164 PRAM1Q96QH2 718 aa27.36■■□□□ 1.97
TSPAN17-207ENST00000508164 TBC1D32Q96NH3 1257 aa27.36■■□□□ 1.97
TSPAN17-207ENST00000508164 UPF2Q9HAU5 1272 aaKnown RBP27.36■■□□□ 1.97
TSPAN17-207ENST00000508164 NCBP3Q53F19 620 aaKnown RBP27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms