RNA–Protein interactions for RNA: ENST00000507594.1

SMAD1-207, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-207ENST00000507594 ARHGEF28Q8N1W1 1705 aaKnown RBP12.71□□□□□ -0.37
SMAD1-207ENST00000507594 USP47Q96K76 1375 aa12.71□□□□□ -0.37
SMAD1-207ENST00000507594 NWD1Q149M9 1564 aa12.71□□□□□ -0.37
SMAD1-207ENST00000507594 EIF4G2P78344 907 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMAD1-207ENST00000507594 PRAM1Q96QH2 718 aa12.7□□□□□ -0.38
SMAD1-207ENST00000507594 CPS1P31327 1500 aa12.7□□□□□ -0.38
SMAD1-207ENST00000507594 NKTRP30414 1462 aaKnown RBP12.7□□□□□ -0.38
SMAD1-207ENST00000507594 GPRASP1Q5JY77 1395 aa12.69□□□□□ -0.38
SMAD1-207ENST00000507594 CENPJQ9HC77 1338 aaPredicted RBP12.69□□□□□ -0.38
SMAD1-207ENST00000507594 RBM33Q96EV2 1170 aaKnown RBP12.69□□□□□ -0.38
SMAD1-207ENST00000507594 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
SMAD1-207ENST00000507594 QRICH2Q9H0J4 1663 aa12.69□□□□□ -0.38
SMAD1-207ENST00000507594 PTCH1Q13635 1447 aa12.69□□□□□ -0.38
SMAD1-207ENST00000507594 STRCP1A6NGW2 1772 aa12.69□□□□□ -0.38
SMAD1-207ENST00000507594 WAPLQ7Z5K2 1190 aa12.68□□□□□ -0.38
SMAD1-207ENST00000507594 ABCC11Q96J66 1382 aa12.68□□□□□ -0.38
SMAD1-207ENST00000507594 ROBO2Q9HCK4 1378 aa12.68□□□□□ -0.38
SMAD1-207ENST00000507594 DLC1Q96QB1 1528 aa12.67□□□□□ -0.38
SMAD1-207ENST00000507594 MINK1Q8N4C8 1332 aaPredicted RBP12.67□□□□□ -0.38
SMAD1-207ENST00000507594 TECPR2O15040 1411 aa12.66□□□□□ -0.38
SMAD1-207ENST00000507594 HSPA5P11021 654 aaKnown RBP12.66□□□□□ -0.38
SMAD1-207ENST00000507594 POLR3GLQ9BT43 218 aa12.66□□□□□ -0.38
SMAD1-207ENST00000507594 HIRIP3Q9BW71 556 aaPredicted RBP12.66□□□□□ -0.38
SMAD1-207ENST00000507594 PLEKHH1Q9ULM0 1364 aa12.66□□□□□ -0.38
SMAD1-207ENST00000507594 ST20-MTHFSA0A0A6YYL1 179 aa12.65□□□□□ -0.38
SMAD1-207ENST00000507594 TMEM94Q12767 1356 aa12.65□□□□□ -0.38
SMAD1-207ENST00000507594 FAM135BQ49AJ0 1406 aa12.64□□□□□ -0.39
SMAD1-207ENST00000507594 MSH6P52701 1360 aa12.64□□□□□ -0.39
SMAD1-207ENST00000507594 FBXO3Q9UK99 471 aa12.63□□□□□ -0.39
SMAD1-207ENST00000507594 LRRC7Q96NW7 1537 aa12.62□□□□□ -0.39
SMAD1-207ENST00000507594 NALCNQ8IZF0 1738 aa12.62□□□□□ -0.39
SMAD1-207ENST00000507594 SRPK2P78362 688 aaKnown RBP12.62□□□□□ -0.39
SMAD1-207ENST00000507594 ADGRL3Q9HAR2 1447 aa12.62□□□□□ -0.39
SMAD1-207ENST00000507594 ATF3P18847 181 aa12.61□□□□□ -0.39
SMAD1-207ENST00000507594 TMF1P82094 1093 aa12.61□□□□□ -0.39
SMAD1-207ENST00000507594 SIRT1Q96EB6 747 aa12.61□□□□□ -0.39
SMAD1-207ENST00000507594 EVC2Q86UK5 1308 aa12.61□□□□□ -0.39
SMAD1-207ENST00000507594 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.6□□□□□ -0.39
SMAD1-207ENST00000507594 LTBP4Q8N2S1 1624 aa12.6□□□□□ -0.39
SMAD1-207ENST00000507594 NUTM2FA1L443 756 aa12.6□□□□□ -0.39
SMAD1-207ENST00000507594 XIRP1Q702N8 1843 aaKnown RBP12.59□□□□□ -0.39
SMAD1-207ENST00000507594 CDC42BPGQ6DT37 1551 aa12.58□□□□□ -0.4
SMAD1-207ENST00000507594 ADGRB2O60241 1585 aa12.57□□□□□ -0.4
SMAD1-207ENST00000507594 NCOA3Q9Y6Q9 1424 aa12.57□□□□□ -0.4
SMAD1-207ENST00000507594 CDCA8Q53HL2 280 aa12.57□□□□□ -0.4
SMAD1-207ENST00000507594 CADPS2Q86UW7 1296 aa12.57□□□□□ -0.4
SMAD1-207ENST00000507594 CDK19Q9BWU1 502 aa12.57□□□□□ -0.4
SMAD1-207ENST00000507594 C19orf44Q9H6X5 657 aa12.57□□□□□ -0.4
SMAD1-207ENST00000507594 WASLO00401 505 aaPredicted RBP12.56□□□□□ -0.4
SMAD1-207ENST00000507594 CABP2Q9NPB3 220 aa12.56□□□□□ -0.4
SMAD1-207ENST00000507594 TULP4Q9NRJ4 1543 aa12.56□□□□□ -0.4
SMAD1-207ENST00000507594 SBNO2Q9Y2G9 1366 aa12.56□□□□□ -0.4
SMAD1-207ENST00000507594 FMN2Q9NZ56 1722 aa12.55□□□□□ -0.4
SMAD1-207ENST00000507594 CERKQ8TCT0 537 aa12.55□□□□□ -0.4
SMAD1-207ENST00000507594 TMC1Q8TDI8 760 aa12.55□□□□□ -0.4
SMAD1-207ENST00000507594 DISP3Q9P2K9 1392 aa12.55□□□□□ -0.4
SMAD1-207ENST00000507594 UBAP1LF5GYI3 381 aa12.54□□□□□ -0.4
SMAD1-207ENST00000507594 ITSN1Q15811 1721 aa12.54□□□□□ -0.4
SMAD1-207ENST00000507594 DCCP43146 1447 aa12.54□□□□□ -0.4
SMAD1-207ENST00000507594 TESK2Q96S53 571 aa12.53□□□□□ -0.4
SMAD1-207ENST00000507594 TOM1O60784 492 aa12.52□□□□□ -0.41
SMAD1-207ENST00000507594 PIP4K2BP78356 416 aa12.52□□□□□ -0.41
SMAD1-207ENST00000507594 ESCO1Q5FWF5 840 aa12.52□□□□□ -0.41
SMAD1-207ENST00000507594 ATAD2Q6PL18 1390 aa12.52□□□□□ -0.41
SMAD1-207ENST00000507594 RGPD8O14715 1765 aaPredicted RBP12.51□□□□□ -0.41
SMAD1-207ENST00000507594 ZNF316A6NFI3 1004 aaPredicted RBP12.51□□□□□ -0.41
SMAD1-207ENST00000507594 NUDT16Q96DE0 195 aaKnown RBP12.51□□□□□ -0.41
SMAD1-207ENST00000507594 IQSEC2Q5JU85 1478 aa12.51□□□□□ -0.41
SMAD1-207ENST00000507594 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
SMAD1-207ENST00000507594 MST1RQ04912 1400 aa12.5□□□□□ -0.41
SMAD1-207ENST00000507594 PPIP5K1Q6PFW1 1433 aa12.5□□□□□ -0.41
SMAD1-207ENST00000507594 ANKARQ7Z5J8 1434 aa12.5□□□□□ -0.41
SMAD1-207ENST00000507594 ATP7BP35670 1465 aa12.49□□□□□ -0.41
SMAD1-207ENST00000507594 C1orf167Q5SNV9 1468 aa12.49□□□□□ -0.41
SMAD1-207ENST00000507594 KIF7Q2M1P5 1343 aa12.49□□□□□ -0.41
SMAD1-207ENST00000507594 NGDNQ8NEJ9 315 aaKnown RBP12.49□□□□□ -0.41
SMAD1-207ENST00000507594 PMFBP1Q8TBY8 1022 aa12.49□□□□□ -0.41
SMAD1-207ENST00000507594 CCDC7Q96M83 1385 aa12.48□□□□□ -0.41
SMAD1-207ENST00000507594 SLAIN2Q9P270 581 aa12.48□□□□□ -0.41
SMAD1-207ENST00000507594 KIF1AQ12756 1690 aa12.48□□□□□ -0.41
SMAD1-207ENST00000507594 USP32Q8NFA0 1604 aa12.48□□□□□ -0.41
SMAD1-207ENST00000507594 PRR36Q9H6K5 1346 aa12.47□□□□□ -0.41
SMAD1-207ENST00000507594 HDGFL2Q7Z4V5 671 aaPredicted RBP12.47□□□□□ -0.41
SMAD1-207ENST00000507594 PHF8Q9UPP1 1060 aa12.47□□□□□ -0.41
SMAD1-207ENST00000507594 CCDC61Q9Y6R9 512 aa12.47□□□□□ -0.41
SMAD1-207ENST00000507594 TOPAZ1Q8N9V7 1692 aa12.47□□□□□ -0.41
SMAD1-207ENST00000507594 ROBO1Q9Y6N7 1651 aa12.46□□□□□ -0.41
SMAD1-207ENST00000507594 C11orf95C9JLR9 678 aaPredicted RBP12.46□□□□□ -0.41
SMAD1-207ENST00000507594 PROM2Q8N271 834 aa12.46□□□□□ -0.41
SMAD1-207ENST00000507594 ORAI2Q96SN7 254 aa12.46□□□□□ -0.41
SMAD1-207ENST00000507594 CABP1Q9NZU7 370 aa12.46□□□□□ -0.41
SMAD1-207ENST00000507594 NINLQ9Y2I6 1382 aa12.45□□□□□ -0.42
SMAD1-207ENST00000507594 WASHC2AQ641Q2 1341 aa12.45□□□□□ -0.42
SMAD1-207ENST00000507594 TERF2IPQ9NYB0 399 aa12.45□□□□□ -0.42
SMAD1-207ENST00000507594 MYOM1P52179 1685 aa12.45□□□□□ -0.42
SMAD1-207ENST00000507594 PAK3O75914 559 aaPredicted RBP12.44□□□□□ -0.42
SMAD1-207ENST00000507594 PSME1Q06323 249 aa12.44□□□□□ -0.42
SMAD1-207ENST00000507594 PUS7Q96PZ0 661 aaKnown RBP12.44□□□□□ -0.42
SMAD1-207ENST00000507594 SLC12A5Q9H2X9 1139 aa12.44□□□□□ -0.42
SMAD1-207ENST00000507594 ACEP12821 1306 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms