RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 LILRB3O75022 631 aa7.02□□□□□ -1.29
LSM6-205ENST00000507449 CSPP1Q1MSJ5 1256 aa7.02□□□□□ -1.29
LSM6-205ENST00000507449 SLF2Q8IX21 1173 aa7.02□□□□□ -1.29
LSM6-205ENST00000507449 LRCH3Q96II8 777 aa7.02□□□□□ -1.29
LSM6-205ENST00000507449 ZMYND15Q9H091 742 aa7.02□□□□□ -1.29
LSM6-205ENST00000507449 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.02□□□□□ -1.29
LSM6-205ENST00000507449 CFHP08603 1231 aa7.01□□□□□ -1.29
LSM6-205ENST00000507449 USP46P62068 366 aa7.01□□□□□ -1.29
LSM6-205ENST00000507449 RSPH4AQ5TD94 716 aa7.01□□□□□ -1.29
LSM6-205ENST00000507449 CABLES1Q8TDN4 633 aa7.01□□□□□ -1.29
LSM6-205ENST00000507449 ATP1B4Q9UN42 357 aaPredicted RBP7.01□□□□□ -1.29
LSM6-205ENST00000507449 SUPT5HO00267 1087 aaKnown RBP7□□□□□ -1.29
LSM6-205ENST00000507449 DGAT1O75907 488 aa7□□□□□ -1.29
LSM6-205ENST00000507449 HDGFP51858 240 aaKnown RBP7□□□□□ -1.29
LSM6-205ENST00000507449 FUT2Q10981 343 aa7□□□□□ -1.29
LSM6-205ENST00000507449 RTL5Q5HYW3 569 aaPredicted RBP7□□□□□ -1.29
LSM6-205ENST00000507449 HPS5Q9UPZ3 1129 aa7□□□□□ -1.29
LSM6-205ENST00000507449 FAM181BA6NEQ2 426 aa6.99□□□□□ -1.29
LSM6-205ENST00000507449 RNF40O75150 1001 aa6.99□□□□□ -1.29
LSM6-205ENST00000507449 FDX1P10109 184 aa6.99□□□□□ -1.29
LSM6-205ENST00000507449 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.99□□□□□ -1.29
LSM6-205ENST00000507449 SNRKQ9NRH2 765 aa6.99□□□□□ -1.29
LSM6-205ENST00000507449 HRCP23327 699 aa6.98□□□□□ -1.29
LSM6-205ENST00000507449 PPP1R18Q6NYC8 613 aa6.98□□□□□ -1.29
LSM6-205ENST00000507449 CLUAP1Q96AJ1 413 aa6.98□□□□□ -1.29
LSM6-205ENST00000507449 PRPF38BQ5VTL8 546 aaKnown RBP6.97□□□□□ -1.29
LSM6-205ENST00000507449 BANK1Q8NDB2 785 aa6.97□□□□□ -1.29
LSM6-205ENST00000507449 POM121Q96HA1 1249 aa6.97□□□□□ -1.29
LSM6-205ENST00000507449 IL21Q9HBE4 155 aa6.97□□□□□ -1.29
LSM6-205ENST00000507449 SPDYE5A6NIY4 337 aa6.96□□□□□ -1.3
LSM6-205ENST00000507449 WFS1O76024 890 aa6.96□□□□□ -1.3
LSM6-205ENST00000507449 SLC4A3P48751 1232 aa6.96□□□□□ -1.3
LSM6-205ENST00000507449 PPP4CP60510 307 aa6.96□□□□□ -1.3
LSM6-205ENST00000507449 MTMR14Q8NCE2 650 aa6.96□□□□□ -1.3
LSM6-205ENST00000507449 ZBTB3Q9H5J0 574 aa6.96□□□□□ -1.3
LSM6-205ENST00000507449 ACTN4O43707 911 aaKnown RBP6.95□□□□□ -1.3
LSM6-205ENST00000507449 ATP6V1AP38606 617 aa6.95□□□□□ -1.3
LSM6-205ENST00000507449 PUS10Q3MIT2 529 aaKnown RBP6.95□□□□□ -1.3
LSM6-205ENST00000507449 TMEM259Q4ZIN3 620 aa6.95□□□□□ -1.3
LSM6-205ENST00000507449 MORN1Q5T089 497 aa6.95□□□□□ -1.3
LSM6-205ENST00000507449 A6NJR5 290 aa6.94□□□□□ -1.3
LSM6-205ENST00000507449 CFAP99D6REC4 459 aa6.94□□□□□ -1.3
LSM6-205ENST00000507449 UBTFP17480 764 aaKnown RBP6.94□□□□□ -1.3
LSM6-205ENST00000507449 APLP1P51693 650 aa6.94□□□□□ -1.3
LSM6-205ENST00000507449 MYT1Q01538 1121 aa6.94□□□□□ -1.3
LSM6-205ENST00000507449 KMT5BQ4FZB7 885 aa6.94□□□□□ -1.3
LSM6-205ENST00000507449 SYMPKQ92797 1274 aaKnown RBP6.94□□□□□ -1.3
LSM6-205ENST00000507449 C1orf115Q9H7X2 142 aa6.94□□□□□ -1.3
LSM6-205ENST00000507449 NUTM2BA6NNL0 878 aaPredicted RBP6.93□□□□□ -1.3
LSM6-205ENST00000507449 NUTM2EB1AL46 878 aaPredicted RBP6.93□□□□□ -1.3
LSM6-205ENST00000507449 AP1G2O75843 785 aa6.93□□□□□ -1.3
LSM6-205ENST00000507449 MTMR2Q13614 643 aa6.93□□□□□ -1.3
LSM6-205ENST00000507449 NUTM2DQ5VT03 806 aaPredicted RBP6.93□□□□□ -1.3
LSM6-205ENST00000507449 NUTM2AQ8IVF1 878 aaPredicted RBP6.93□□□□□ -1.3
LSM6-205ENST00000507449 SLC27A5Q9Y2P5 690 aa6.93□□□□□ -1.3
LSM6-205ENST00000507449 COG6Q9Y2V7 657 aa6.93□□□□□ -1.3
LSM6-205ENST00000507449 USP17L8P0C7I0 530 aa6.92□□□□□ -1.3
LSM6-205ENST00000507449 CTDSPL2Q05D32 466 aa6.91□□□□□ -1.3
LSM6-205ENST00000507449 GRIPAP1Q4V328 841 aa6.91□□□□□ -1.3
LSM6-205ENST00000507449 TJAP1Q5JTD0 557 aa6.91□□□□□ -1.3
LSM6-205ENST00000507449 LCE2AQ5TA79 106 aaPredicted RBP6.91□□□□□ -1.3
LSM6-205ENST00000507449 FNBP4Q8N3X1 1017 aaPredicted RBP6.91□□□□□ -1.3
LSM6-205ENST00000507449 HMX1Q9NP08 348 aaPredicted RBP6.91□□□□□ -1.3
LSM6-205ENST00000507449 C6orf229H3BNL8 230 aa6.9□□□□□ -1.3
LSM6-205ENST00000507449 SOCS7O14512 581 aa6.9□□□□□ -1.3
LSM6-205ENST00000507449 WIPF1O43516 503 aa6.9□□□□□ -1.3
LSM6-205ENST00000507449 TRAK2O60296 914 aa6.9□□□□□ -1.3
LSM6-205ENST00000507449 BLOC1S3Q6QNY0 202 aa6.9□□□□□ -1.3
LSM6-205ENST00000507449 RNF19BQ6ZMZ0 732 aa6.9□□□□□ -1.3
LSM6-205ENST00000507449 NECTIN2Q92692 538 aa6.9□□□□□ -1.3
LSM6-205ENST00000507449 GJD4Q96KN9 370 aaPredicted RBP6.9□□□□□ -1.3
LSM6-205ENST00000507449 ARID3CA6NKF2 412 aa6.89□□□□□ -1.31
LSM6-205ENST00000507449 GPR37L1O60883 481 aa6.89□□□□□ -1.31
LSM6-205ENST00000507449 PROSER2Q86WR7 435 aaPredicted RBP6.89□□□□□ -1.31
LSM6-205ENST00000507449 PRR7Q8TB68 274 aa6.88□□□□□ -1.31
LSM6-205ENST00000507449 LRRN4Q8WUT4 740 aa6.88□□□□□ -1.31
LSM6-205ENST00000507449 THAP11Q96EK4 314 aa6.88□□□□□ -1.31
LSM6-205ENST00000507449 MTRQ99707 1265 aa6.88□□□□□ -1.31
LSM6-205ENST00000507449 PRR14Q9BWN1 585 aa6.88□□□□□ -1.31
LSM6-205ENST00000507449 TRIM34Q9BYJ4 488 aa6.88□□□□□ -1.31
LSM6-205ENST00000507449 POTECB2RU33 542 aa6.87□□□□□ -1.31
LSM6-205ENST00000507449 PER1O15534 1290 aaPredicted RBP6.87□□□□□ -1.31
LSM6-205ENST00000507449 BRICD5Q6PL45 260 aa6.87□□□□□ -1.31
LSM6-205ENST00000507449 RETREG3Q86VR2 466 aa6.87□□□□□ -1.31
LSM6-205ENST00000507449 SCUBE3Q8IX30 993 aa6.87□□□□□ -1.31
LSM6-205ENST00000507449 GDPD2Q9HCC8 539 aa6.87□□□□□ -1.31
LSM6-205ENST00000507449 TBC1D2BQ9UPU7 963 aa6.87□□□□□ -1.31
LSM6-205ENST00000507449 PCDHB3Q9Y5E6 796 aa6.87□□□□□ -1.31
LSM6-205ENST00000507449 FAM187AA6NFU0 413 aa6.86□□□□□ -1.31
LSM6-205ENST00000507449 HELBQ8NG08 1087 aaPredicted RBP6.86□□□□□ -1.31
LSM6-205ENST00000507449 EPS8L1Q8TE68 723 aa6.86□□□□□ -1.31
LSM6-205ENST00000507449 TSC1Q92574 1164 aa6.86□□□□□ -1.31
LSM6-205ENST00000507449 RAD21O60216 631 aa6.85□□□□□ -1.31
LSM6-205ENST00000507449 PRR20EP86478 221 aa6.85□□□□□ -1.31
LSM6-205ENST00000507449 PRR20CP86479 221 aa6.85□□□□□ -1.31
LSM6-205ENST00000507449 PRR20DP86480 221 aa6.85□□□□□ -1.31
LSM6-205ENST00000507449 PRR20BP86481 221 aa6.85□□□□□ -1.31
LSM6-205ENST00000507449 PRR20AP86496 221 aa6.85□□□□□ -1.31
LSM6-205ENST00000507449 Q3C1V9 767 aa6.85□□□□□ -1.31
LSM6-205ENST00000507449 SALL2Q9Y467 1007 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms