RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 CCDC102AQ96A19 550 aa7.57□□□□□ -1.2
HMGB3P15-201ENST00000507326 ZNF775Q96BV0 537 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P15-201ENST00000507326 ZBTB24O43167 697 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P15-201ENST00000507326 CYP4X1Q8N118 509 aa7.55□□□□□ -1.2
HMGB3P15-201ENST00000507326 AAASQ9NRG9 546 aa7.55□□□□□ -1.2
HMGB3P15-201ENST00000507326 USB1Q9BQ65 265 aaKnown RBP7.54□□□□□ -1.2
HMGB3P15-201ENST00000507326 TOR4AQ9NXH8 423 aa7.54□□□□□ -1.2
HMGB3P15-201ENST00000507326 MMP16P51512 607 aa7.53□□□□□ -1.2
HMGB3P15-201ENST00000507326 USP46P62068 366 aa7.53□□□□□ -1.2
HMGB3P15-201ENST00000507326 GUCA2AQ02747 115 aa7.53□□□□□ -1.2
HMGB3P15-201ENST00000507326 HOXA2O43364 376 aa7.52□□□□□ -1.21
HMGB3P15-201ENST00000507326 GPCPD1Q9NPB8 672 aa7.52□□□□□ -1.21
HMGB3P15-201ENST00000507326 TTC24A2A3L6 582 aaPredicted RBP7.51□□□□□ -1.21
HMGB3P15-201ENST00000507326 DXOO77932 396 aaKnown RBP7.51□□□□□ -1.21
HMGB3P15-201ENST00000507326 CLCN1P35523 988 aa7.51□□□□□ -1.21
HMGB3P15-201ENST00000507326 TRIM32Q13049 653 aa7.51□□□□□ -1.21
HMGB3P15-201ENST00000507326 CCDC24Q8N4L8 307 aa7.51□□□□□ -1.21
HMGB3P15-201ENST00000507326 FAM217BQ9NTX9 383 aaPredicted RBP7.51□□□□□ -1.21
HMGB3P15-201ENST00000507326 DACH1Q9UI36 760 aa7.51□□□□□ -1.21
HMGB3P15-201ENST00000507326 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.5□□□□□ -1.21
HMGB3P15-201ENST00000507326 KRI1Q8N9T8 703 aaKnown RBP7.5□□□□□ -1.21
HMGB3P15-201ENST00000507326 WNT7AO00755 349 aa7.49□□□□□ -1.21
HMGB3P15-201ENST00000507326 AXIN1O15169 862 aa7.49□□□□□ -1.21
HMGB3P15-201ENST00000507326 AVPP01185 164 aa7.49□□□□□ -1.21
HMGB3P15-201ENST00000507326 NUTM1Q86Y26 1132 aa7.49□□□□□ -1.21
HMGB3P15-201ENST00000507326 CRIPAKQ8N1N5 446 aa7.49□□□□□ -1.21
HMGB3P15-201ENST00000507326 SYMPKQ92797 1274 aaKnown RBP7.49□□□□□ -1.21
HMGB3P15-201ENST00000507326 SLC24A1O60721 1099 aa7.47□□□□□ -1.21
HMGB3P15-201ENST00000507326 MRGPRX2Q96LB1 330 aa7.47□□□□□ -1.21
HMGB3P15-201ENST00000507326 REPIN1Q9BWE0 567 aaKnown RBP7.47□□□□□ -1.21
HMGB3P15-201ENST00000507326 SMPD1P17405 629 aa7.46□□□□□ -1.22
HMGB3P15-201ENST00000507326 JUNDP17535 347 aa7.46□□□□□ -1.22
HMGB3P15-201ENST00000507326 CTC1Q2NKJ3 1217 aa7.46□□□□□ -1.22
HMGB3P15-201ENST00000507326 SNIP1Q8TAD8 396 aaKnown RBP7.46□□□□□ -1.22
HMGB3P15-201ENST00000507326 GMPR2Q9P2T1 348 aaKnown RBP7.46□□□□□ -1.22
HMGB3P15-201ENST00000507326 J3QL48 77 aa7.45□□□□□ -1.22
HMGB3P15-201ENST00000507326 FDX1P10109 184 aa7.45□□□□□ -1.22
HMGB3P15-201ENST00000507326 SKOR1P84550 965 aa7.45□□□□□ -1.22
HMGB3P15-201ENST00000507326 SSTR3P32745 418 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P15-201ENST00000507326 SMCPP49901 116 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P15-201ENST00000507326 RETREG3Q86VR2 466 aa7.44□□□□□ -1.22
HMGB3P15-201ENST00000507326 TTLL12Q14166 644 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P15-201ENST00000507326 RC3H1Q5TC82 1133 aaKnown RBP7.43□□□□□ -1.22
HMGB3P15-201ENST00000507326 PCDHGC3Q9UN70 934 aa7.43□□□□□ -1.22
HMGB3P15-201ENST00000507326 C11orf95C9JLR9 678 aaPredicted RBP7.42□□□□□ -1.22
HMGB3P15-201ENST00000507326 C6orf229H3BNL8 230 aa7.42□□□□□ -1.22
HMGB3P15-201ENST00000507326 BARGINQ6ZT62 677 aa7.42□□□□□ -1.22
HMGB3P15-201ENST00000507326 SPIRE2Q8WWL2 714 aa7.42□□□□□ -1.22
HMGB3P15-201ENST00000507326 NUDT12Q9BQG2 462 aa7.42□□□□□ -1.22
HMGB3P15-201ENST00000507326 NDUFV2P19404 249 aa7.41□□□□□ -1.22
HMGB3P15-201ENST00000507326 WNT7BP56706 349 aa7.41□□□□□ -1.22
HMGB3P15-201ENST00000507326 PTCRAQ6ISU1 281 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P15-201ENST00000507326 HPS1Q92902 700 aa7.41□□□□□ -1.22
HMGB3P15-201ENST00000507326 MOXD2PA6NHM9 499 aa7.4□□□□□ -1.22
HMGB3P15-201ENST00000507326 ZMYND10O75800 440 aa7.4□□□□□ -1.22
HMGB3P15-201ENST00000507326 TREML4Q6UXN2 200 aa7.4□□□□□ -1.22
HMGB3P15-201ENST00000507326 ZC3H15Q8WU90 426 aaKnown RBP7.4□□□□□ -1.22
HMGB3P15-201ENST00000507326 MS4A1P11836 297 aa7.39□□□□□ -1.23
HMGB3P15-201ENST00000507326 ATP13A2Q9NQ11 1180 aa7.39□□□□□ -1.23
HMGB3P15-201ENST00000507326 CCNYL3P0C7X3 344 aa7.38□□□□□ -1.23
HMGB3P15-201ENST00000507326 AMHR2Q16671 573 aa7.38□□□□□ -1.23
HMGB3P15-201ENST00000507326 GIGYF2Q6Y7W6 1299 aaKnown RBP7.38□□□□□ -1.23
HMGB3P15-201ENST00000507326 ALDH1A1P00352 501 aa7.37□□□□□ -1.23
HMGB3P15-201ENST00000507326 EHBP1Q8NDI1 1231 aa7.37□□□□□ -1.23
HMGB3P15-201ENST00000507326 LCE2AQ5TA79 106 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P15-201ENST00000507326 PRR7Q8TB68 274 aa7.36□□□□□ -1.23
HMGB3P15-201ENST00000507326 BEGAINQ9BUH8 593 aa7.36□□□□□ -1.23
HMGB3P15-201ENST00000507326 WFS1O76024 890 aa7.35□□□□□ -1.23
HMGB3P15-201ENST00000507326 SNRPBP14678 240 aaKnown RBP7.35□□□□□ -1.23
HMGB3P15-201ENST00000507326 SH3BP2P78314 561 aa7.35□□□□□ -1.23
HMGB3P15-201ENST00000507326 PTPRNQ16849 979 aa7.35□□□□□ -1.23
HMGB3P15-201ENST00000507326 LINC01559Q495D7 138 aa7.35□□□□□ -1.23
HMGB3P15-201ENST00000507326 SIAH2O43255 324 aa7.34□□□□□ -1.23
HMGB3P15-201ENST00000507326 MTMR2Q13614 643 aa7.34□□□□□ -1.23
HMGB3P15-201ENST00000507326 TRIM47Q96LD4 638 aa7.34□□□□□ -1.23
HMGB3P15-201ENST00000507326 UNC93B1Q9H1C4 597 aa7.34□□□□□ -1.23
HMGB3P15-201ENST00000507326 SENP2Q9HC62 589 aa7.34□□□□□ -1.23
HMGB3P15-201ENST00000507326 PARP9Q8IXQ6 854 aa7.33□□□□□ -1.24
HMGB3P15-201ENST00000507326 TBC1D2Q9BYX2 928 aa7.33□□□□□ -1.24
HMGB3P15-201ENST00000507326 EVA1BQ9NVM1 165 aa7.33□□□□□ -1.24
HMGB3P15-201ENST00000507326 WASF2Q9Y6W5 498 aa7.33□□□□□ -1.24
HMGB3P15-201ENST00000507326 KCNH2Q12809 1159 aa7.32□□□□□ -1.24
HMGB3P15-201ENST00000507326 NFX1Q12986 1120 aaKnown RBP7.32□□□□□ -1.24
HMGB3P15-201ENST00000507326 BAP1Q92560 729 aa7.32□□□□□ -1.24
HMGB3P15-201ENST00000507326 SPDYE5A6NIY4 337 aa7.31□□□□□ -1.24
HMGB3P15-201ENST00000507326 TRIM66O15016 1216 aa7.31□□□□□ -1.24
HMGB3P15-201ENST00000507326 RSBN1LQ6PCB5 846 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P15-201ENST00000507326 PCDHB15Q9Y5E8 787 aa7.31□□□□□ -1.24
HMGB3P15-201ENST00000507326 KIFC2Q96AC6 838 aa7.3□□□□□ -1.24
HMGB3P15-201ENST00000507326 TLL2Q9Y6L7 1015 aa7.3□□□□□ -1.24
HMGB3P15-201ENST00000507326 CAPN5O15484 640 aaPredicted RBP7.29□□□□□ -1.24
HMGB3P15-201ENST00000507326 BMP1P13497 986 aa7.29□□□□□ -1.24
HMGB3P15-201ENST00000507326 CTHP32929 405 aa7.29□□□□□ -1.24
HMGB3P15-201ENST00000507326 DIXDC1Q155Q3 683 aa7.29□□□□□ -1.24
HMGB3P15-201ENST00000507326 DESI1Q6ICB0 168 aa7.29□□□□□ -1.24
HMGB3P15-201ENST00000507326 ZNF511Q8NB15 262 aa7.29□□□□□ -1.24
HMGB3P15-201ENST00000507326 CFAP99D6REC4 459 aa7.28□□□□□ -1.24
HMGB3P15-201ENST00000507326 TERTO14746 1132 aaKnown RBP7.28□□□□□ -1.24
HMGB3P15-201ENST00000507326 SPTLC1O15269 473 aa7.28□□□□□ -1.24
HMGB3P15-201ENST00000507326 GJA5P36382 358 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms