RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 PRKCSHP14314 528 aaPredicted RBP14.24□□□□□ -0.13
PFDN1-202ENST00000507185 LAMC3Q9Y6N6 1575 aa14.23□□□□□ -0.13
PFDN1-202ENST00000507185 USP46P62068 366 aa14.23□□□□□ -0.13
PFDN1-202ENST00000507185 TTLL12Q14166 644 aaPredicted RBP14.23□□□□□ -0.13
PFDN1-202ENST00000507185 BRICD5Q6PL45 260 aa14.23□□□□□ -0.13
PFDN1-202ENST00000507185 Q3C1V9 767 aa14.22□□□□□ -0.13
PFDN1-202ENST00000507185 REPIN1Q9BWE0 567 aaKnown RBP14.22□□□□□ -0.13
PFDN1-202ENST00000507185 RNF19BQ6ZMZ0 732 aa14.2□□□□□ -0.14
PFDN1-202ENST00000507185 Q6ZNB5 142 aa14.2□□□□□ -0.14
PFDN1-202ENST00000507185 FAM160A2Q8N612 972 aaPredicted RBP14.2□□□□□ -0.14
PFDN1-202ENST00000507185 SSTR3P32745 418 aaPredicted RBP14.19□□□□□ -0.14
PFDN1-202ENST00000507185 AMHR2Q16671 573 aa14.19□□□□□ -0.14
PFDN1-202ENST00000507185 NUTM1Q86Y26 1132 aa14.19□□□□□ -0.14
PFDN1-202ENST00000507185 EMID1Q96A84 441 aaPredicted RBP14.19□□□□□ -0.14
PFDN1-202ENST00000507185 MROH2BQ7Z745 1585 aa14.17□□□□□ -0.14
PFDN1-202ENST00000507185 HOXA2O43364 376 aa14.17□□□□□ -0.14
PFDN1-202ENST00000507185 SPRYD7Q5W111 196 aa14.17□□□□□ -0.14
PFDN1-202ENST00000507185 LIAT1Q6ZQX7 453 aa14.17□□□□□ -0.14
PFDN1-202ENST00000507185 PDZRN3Q9UPQ7 1066 aa14.16□□□□□ -0.14
PFDN1-202ENST00000507185 CADPSQ9ULU8 1353 aa14.16□□□□□ -0.14
PFDN1-202ENST00000507185 KIF21AQ7Z4S6 1674 aa14.16□□□□□ -0.14
PFDN1-202ENST00000507185 MRC2Q9UBG0 1479 aa14.15□□□□□ -0.14
PFDN1-202ENST00000507185 NRG2O14511 850 aaPredicted RBP14.15□□□□□ -0.14
PFDN1-202ENST00000507185 MSS51Q4VC12 460 aa14.15□□□□□ -0.14
PFDN1-202ENST00000507185 HLA-CQ95604 372 aa14.15□□□□□ -0.14
PFDN1-202ENST00000507185 AK7Q96M32 723 aa14.15□□□□□ -0.14
PFDN1-202ENST00000507185 PLA2G2CQ5R387 149 aa14.14□□□□□ -0.15
PFDN1-202ENST00000507185 GIGYF2Q6Y7W6 1299 aaKnown RBP14.14□□□□□ -0.15
PFDN1-202ENST00000507185 ZNF598Q86UK7 904 aaKnown RBP14.14□□□□□ -0.15
PFDN1-202ENST00000507185 PRDM9Q9NQV7 894 aa14.14□□□□□ -0.15
PFDN1-202ENST00000507185 FCF1Q9Y324 198 aaKnown RBP14.14□□□□□ -0.15
PFDN1-202ENST00000507185 TRIM66O15016 1216 aa14.13□□□□□ -0.15
PFDN1-202ENST00000507185 PEG3Q9GZU2 1588 aa14.13□□□□□ -0.15
PFDN1-202ENST00000507185 USB1Q9BQ65 265 aaKnown RBP14.12□□□□□ -0.15
PFDN1-202ENST00000507185 GUCA2AQ02747 115 aa14.11□□□□□ -0.15
PFDN1-202ENST00000507185 ZNF697Q5TEC3 545 aa14.1□□□□□ -0.15
PFDN1-202ENST00000507185 PARP9Q8IXQ6 854 aa14.08□□□□□ -0.16
PFDN1-202ENST00000507185 SPIRE2Q8WWL2 714 aa14.07□□□□□ -0.16
PFDN1-202ENST00000507185 RPIAP49247 311 aa14.06□□□□□ -0.16
PFDN1-202ENST00000507185 BEGAINQ9BUH8 593 aa14.06□□□□□ -0.16
PFDN1-202ENST00000507185 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
PFDN1-202ENST00000507185 FDX1P10109 184 aa14.05□□□□□ -0.16
PFDN1-202ENST00000507185 MMP16P51512 607 aa14.05□□□□□ -0.16
PFDN1-202ENST00000507185 TRIM67Q6ZTA4 783 aa14.05□□□□□ -0.16
PFDN1-202ENST00000507185 WDR62O43379 1518 aa14.05□□□□□ -0.16
PFDN1-202ENST00000507185 ZBTB24O43167 697 aaPredicted RBP14.04□□□□□ -0.16
PFDN1-202ENST00000507185 CD2BP2O95400 341 aaKnown RBP14.04□□□□□ -0.16
PFDN1-202ENST00000507185 SLC24A3Q9HC58 644 aa14.04□□□□□ -0.16
PFDN1-202ENST00000507185 SYMPKQ92797 1274 aaKnown RBP14.03□□□□□ -0.16
PFDN1-202ENST00000507185 DXOO77932 396 aaKnown RBP14.02□□□□□ -0.17
PFDN1-202ENST00000507185 TRAF7Q6Q0C0 670 aa14.02□□□□□ -0.17
PFDN1-202ENST00000507185 FANCD2Q9BXW9 1451 aa14.01□□□□□ -0.17
PFDN1-202ENST00000507185 PRR20EP86478 221 aa14.01□□□□□ -0.17
PFDN1-202ENST00000507185 PRR20CP86479 221 aa14.01□□□□□ -0.17
PFDN1-202ENST00000507185 PRR20DP86480 221 aa14.01□□□□□ -0.17
PFDN1-202ENST00000507185 PRR20BP86481 221 aa14.01□□□□□ -0.17
PFDN1-202ENST00000507185 PRR20AP86496 221 aa14.01□□□□□ -0.17
PFDN1-202ENST00000507185 MOXD2PA6NHM9 499 aa14□□□□□ -0.17
PFDN1-202ENST00000507185 C6orf229H3BNL8 230 aa14□□□□□ -0.17
PFDN1-202ENST00000507185 NDUFV2P19404 249 aa14□□□□□ -0.17
PFDN1-202ENST00000507185 PDE4DQ08499 809 aa14□□□□□ -0.17
PFDN1-202ENST00000507185 PCDHGC3Q9UN70 934 aa14□□□□□ -0.17
PFDN1-202ENST00000507185 TNFRSF10AO00220 468 aa13.99□□□□□ -0.17
PFDN1-202ENST00000507185 GDF9O60383 454 aa13.99□□□□□ -0.17
PFDN1-202ENST00000507185 MS4A1P11836 297 aa13.99□□□□□ -0.17
PFDN1-202ENST00000507185 DIXDC1Q155Q3 683 aa13.99□□□□□ -0.17
PFDN1-202ENST00000507185 RETREG3Q86VR2 466 aa13.99□□□□□ -0.17
PFDN1-202ENST00000507185 FOXC1Q12948 553 aa13.98□□□□□ -0.17
PFDN1-202ENST00000507185 CCDC24Q8N4L8 307 aa13.97□□□□□ -0.17
PFDN1-202ENST00000507185 TBC1D2Q9BYX2 928 aa13.97□□□□□ -0.17
PFDN1-202ENST00000507185 JUNDP17535 347 aa13.96□□□□□ -0.17
PFDN1-202ENST00000507185 WIZO95785 1651 aa13.95□□□□□ -0.18
PFDN1-202ENST00000507185 PKD2L1Q9P0L9 805 aa13.95□□□□□ -0.18
PFDN1-202ENST00000507185 LCE2BO14633 110 aa13.94□□□□□ -0.18
PFDN1-202ENST00000507185 TPRNQ4KMQ1 711 aa13.94□□□□□ -0.18
PFDN1-202ENST00000507185 PKDCCQ504Y2 493 aa13.94□□□□□ -0.18
PFDN1-202ENST00000507185 TRIM32Q13049 653 aa13.91□□□□□ -0.18
PFDN1-202ENST00000507185 FAM187AA6NFU0 413 aa13.9□□□□□ -0.18
PFDN1-202ENST00000507185 DGAT1O75907 488 aa13.9□□□□□ -0.18
PFDN1-202ENST00000507185 GJA5P36382 358 aa13.9□□□□□ -0.18
PFDN1-202ENST00000507185 MTMR2Q13614 643 aa13.9□□□□□ -0.18
PFDN1-202ENST00000507185 SPDYE5A6NIY4 337 aa13.89□□□□□ -0.19
PFDN1-202ENST00000507185 RSBN1LQ6PCB5 846 aaPredicted RBP13.89□□□□□ -0.19
PFDN1-202ENST00000507185 NUDT12Q9BQG2 462 aa13.89□□□□□ -0.19
PFDN1-202ENST00000507185 CFTRP13569 1480 aa13.88□□□□□ -0.19
PFDN1-202ENST00000507185 URB2Q14146 1524 aaKnown RBP13.87□□□□□ -0.19
PFDN1-202ENST00000507185 PRR7Q8TB68 274 aa13.87□□□□□ -0.19
PFDN1-202ENST00000507185 SPTLC1O15269 473 aa13.86□□□□□ -0.19
PFDN1-202ENST00000507185 RIC3Q7Z5B4 369 aa13.86□□□□□ -0.19
PFDN1-202ENST00000507185 CYP4X1Q8N118 509 aa13.86□□□□□ -0.19
PFDN1-202ENST00000507185 PCDHB15Q9Y5E8 787 aa13.85□□□□□ -0.19
PFDN1-202ENST00000507185 WNT7AO00755 349 aa13.83□□□□□ -0.2
PFDN1-202ENST00000507185 CYB5RLQ6IPT4 315 aa13.83□□□□□ -0.2
PFDN1-202ENST00000507185 TOR4AQ9NXH8 423 aa13.83□□□□□ -0.2
PFDN1-202ENST00000507185 CCNYL3P0C7X3 344 aa13.82□□□□□ -0.2
PFDN1-202ENST00000507185 MYT1Q01538 1121 aa13.82□□□□□ -0.2
PFDN1-202ENST00000507185 PTPRNQ16849 979 aa13.82□□□□□ -0.2
PFDN1-202ENST00000507185 ZBTB3Q9H5J0 574 aa13.82□□□□□ -0.2
PFDN1-202ENST00000507185 TTC24A2A3L6 582 aaPredicted RBP13.81□□□□□ -0.2
PFDN1-202ENST00000507185 CSPP1Q1MSJ5 1256 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms