RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 SPIRE2Q8WWL2 714 aa9.39□□□□□ -0.91
CALCOCO2-208ENST00000506971 USB1Q9BQ65 265 aaKnown RBP9.39□□□□□ -0.91
CALCOCO2-208ENST00000506971 ZBTB24O43167 697 aaPredicted RBP9.38□□□□□ -0.91
CALCOCO2-208ENST00000506971 LIAT1Q6ZQX7 453 aa9.38□□□□□ -0.91
CALCOCO2-208ENST00000506971 PDZRN3Q9UPQ7 1066 aa9.38□□□□□ -0.91
CALCOCO2-208ENST00000506971 MOXD2PA6NHM9 499 aa9.37□□□□□ -0.91
CALCOCO2-208ENST00000506971 MS4A1P11836 297 aa9.37□□□□□ -0.91
CALCOCO2-208ENST00000506971 CSPP1Q1MSJ5 1256 aa9.37□□□□□ -0.91
CALCOCO2-208ENST00000506971 SALL2Q9Y467 1007 aaPredicted RBP9.37□□□□□ -0.91
CALCOCO2-208ENST00000506971 FOXC1Q12948 553 aa9.36□□□□□ -0.91
CALCOCO2-208ENST00000506971 PLA2G2CQ5R387 149 aa9.36□□□□□ -0.91
CALCOCO2-208ENST00000506971 ZNF697Q5TEC3 545 aa9.36□□□□□ -0.91
CALCOCO2-208ENST00000506971 TBC1D2Q9BYX2 928 aa9.36□□□□□ -0.91
CALCOCO2-208ENST00000506971 SPRYD7Q5W111 196 aa9.35□□□□□ -0.91
CALCOCO2-208ENST00000506971 MSS51Q4VC12 460 aa9.34□□□□□ -0.91
CALCOCO2-208ENST00000506971 TNFRSF10AO00220 468 aa9.33□□□□□ -0.92
CALCOCO2-208ENST00000506971 ZNF598Q86UK7 904 aaKnown RBP9.33□□□□□ -0.92
CALCOCO2-208ENST00000506971 CD2BP2O95400 341 aaKnown RBP9.32□□□□□ -0.92
CALCOCO2-208ENST00000506971 LAPTM4AQ15012 233 aa9.32□□□□□ -0.92
CALCOCO2-208ENST00000506971 TSC1Q92574 1164 aa9.32□□□□□ -0.92
CALCOCO2-208ENST00000506971 EMID1Q96A84 441 aaPredicted RBP9.32□□□□□ -0.92
CALCOCO2-208ENST00000506971 PCDHGC3Q9UN70 934 aa9.32□□□□□ -0.92
CALCOCO2-208ENST00000506971 DIXDC1Q155Q3 683 aa9.31□□□□□ -0.92
CALCOCO2-208ENST00000506971 RETREG3Q86VR2 466 aa9.3□□□□□ -0.92
CALCOCO2-208ENST00000506971 NUTM2BA6NNL0 878 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO2-208ENST00000506971 NUTM2EB1AL46 878 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO2-208ENST00000506971 NRG2O14511 850 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO2-208ENST00000506971 MTMR2Q13614 643 aa9.29□□□□□ -0.92
CALCOCO2-208ENST00000506971 NUTM2DQ5VT03 806 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO2-208ENST00000506971 RIC3Q7Z5B4 369 aa9.29□□□□□ -0.92
CALCOCO2-208ENST00000506971 NUTM2AQ8IVF1 878 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO2-208ENST00000506971 GPBP1L1Q9HC44 474 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO2-208ENST00000506971 JUNDP17535 347 aa9.28□□□□□ -0.92
CALCOCO2-208ENST00000506971 PCDHB15Q9Y5E8 787 aa9.28□□□□□ -0.92
CALCOCO2-208ENST00000506971 DXOO77932 396 aaKnown RBP9.27□□□□□ -0.93
CALCOCO2-208ENST00000506971 RPIAP49247 311 aa9.27□□□□□ -0.93
CALCOCO2-208ENST00000506971 MMP16P51512 607 aa9.27□□□□□ -0.93
CALCOCO2-208ENST00000506971 RSBN1LQ6PCB5 846 aaPredicted RBP9.27□□□□□ -0.93
CALCOCO2-208ENST00000506971 PRR7Q8TB68 274 aa9.27□□□□□ -0.93
CALCOCO2-208ENST00000506971 POLR3EQ9NVU0 708 aa9.27□□□□□ -0.93
CALCOCO2-208ENST00000506971 PKDCCQ504Y2 493 aa9.26□□□□□ -0.93
CALCOCO2-208ENST00000506971 NUDT12Q9BQG2 462 aa9.26□□□□□ -0.93
CALCOCO2-208ENST00000506971 FAM187AA6NFU0 413 aa9.25□□□□□ -0.93
CALCOCO2-208ENST00000506971 CABLES1Q8TDN4 633 aa9.25□□□□□ -0.93
CALCOCO2-208ENST00000506971 TPRNQ4KMQ1 711 aa9.24□□□□□ -0.93
CALCOCO2-208ENST00000506971 MYSM1Q5VVJ2 828 aa9.24□□□□□ -0.93
CALCOCO2-208ENST00000506971 KDM4CQ9H3R0 1056 aa9.24□□□□□ -0.93
CALCOCO2-208ENST00000506971 ZBTB3Q9H5J0 574 aa9.24□□□□□ -0.93
CALCOCO2-208ENST00000506971 CTHP32929 405 aa9.23□□□□□ -0.93
CALCOCO2-208ENST00000506971 TRIM32Q13049 653 aa9.23□□□□□ -0.93
CALCOCO2-208ENST00000506971 TRAF7Q6Q0C0 670 aa9.23□□□□□ -0.93
CALCOCO2-208ENST00000506971 TRIM67Q6ZTA4 783 aa9.23□□□□□ -0.93
CALCOCO2-208ENST00000506971 CYP4X1Q8N118 509 aa9.23□□□□□ -0.93
CALCOCO2-208ENST00000506971 TTC24A2A3L6 582 aaPredicted RBP9.22□□□□□ -0.93
CALCOCO2-208ENST00000506971 SPDYE5A6NIY4 337 aa9.22□□□□□ -0.93
CALCOCO2-208ENST00000506971 SPTLC1O15269 473 aa9.22□□□□□ -0.93
CALCOCO2-208ENST00000506971 HRCP23327 699 aa9.22□□□□□ -0.93
CALCOCO2-208ENST00000506971 RSPH6AQ9H0K4 717 aa9.22□□□□□ -0.93
CALCOCO2-208ENST00000506971 LIMD1Q9UGP4 676 aa9.22□□□□□ -0.93
CALCOCO2-208ENST00000506971 NEUROD2Q15784 382 aa9.21□□□□□ -0.94
CALCOCO2-208ENST00000506971 GDF9O60383 454 aa9.2□□□□□ -0.94
CALCOCO2-208ENST00000506971 CCNYL3P0C7X3 344 aa9.2□□□□□ -0.94
CALCOCO2-208ENST00000506971 FAM117AQ9C073 453 aa9.2□□□□□ -0.94
CALCOCO2-208ENST00000506971 CLK2P49760 499 aaKnown RBP9.19□□□□□ -0.94
CALCOCO2-208ENST00000506971 QPCTQ16769 361 aa9.19□□□□□ -0.94
CALCOCO2-208ENST00000506971 PTCRAQ6ISU1 281 aaPredicted RBP9.19□□□□□ -0.94
CALCOCO2-208ENST00000506971 PKD2L1Q9P0L9 805 aa9.19□□□□□ -0.94
CALCOCO2-208ENST00000506971 CFAP99D6REC4 459 aa9.18□□□□□ -0.94
CALCOCO2-208ENST00000506971 LINC01559Q495D7 138 aa9.18□□□□□ -0.94
CALCOCO2-208ENST00000506971 GJA5P36382 358 aa9.17□□□□□ -0.94
CALCOCO2-208ENST00000506971 PRR20EP86478 221 aa9.17□□□□□ -0.94
CALCOCO2-208ENST00000506971 PRR20CP86479 221 aa9.17□□□□□ -0.94
CALCOCO2-208ENST00000506971 PRR20DP86480 221 aa9.17□□□□□ -0.94
CALCOCO2-208ENST00000506971 PRR20BP86481 221 aa9.17□□□□□ -0.94
CALCOCO2-208ENST00000506971 PRR20AP86496 221 aa9.17□□□□□ -0.94
CALCOCO2-208ENST00000506971 PTPRNQ16849 979 aa9.17□□□□□ -0.94
CALCOCO2-208ENST00000506971 DDRGK1Q96HY6 314 aa9.17□□□□□ -0.94
CALCOCO2-208ENST00000506971 MRGPRX2Q96LB1 330 aa9.16□□□□□ -0.94
CALCOCO2-208ENST00000506971 RC3H1Q5TC82 1133 aaKnown RBP9.15□□□□□ -0.94
CALCOCO2-208ENST00000506971 PRPF38BQ5VTL8 546 aaKnown RBP9.15□□□□□ -0.94
CALCOCO2-208ENST00000506971 EHBP1Q8NDI1 1231 aa9.15□□□□□ -0.94
CALCOCO2-208ENST00000506971 UNC93B1Q9H1C4 597 aa9.15□□□□□ -0.94
CALCOCO2-208ENST00000506971 DGAT1O75907 488 aa9.14□□□□□ -0.95
CALCOCO2-208ENST00000506971 KCNH2Q12809 1159 aa9.14□□□□□ -0.95
CALCOCO2-208ENST00000506971 RTL5Q5HYW3 569 aaPredicted RBP9.14□□□□□ -0.95
CALCOCO2-208ENST00000506971 IL27Q8NEV9 243 aa9.14□□□□□ -0.95
CALCOCO2-208ENST00000506971 HELBQ8NG08 1087 aaPredicted RBP9.14□□□□□ -0.95
CALCOCO2-208ENST00000506971 BAP1Q92560 729 aa9.14□□□□□ -0.95
CALCOCO2-208ENST00000506971 EVA1BQ9NVM1 165 aa9.14□□□□□ -0.95
CALCOCO2-208ENST00000506971 WNT7AO00755 349 aa9.13□□□□□ -0.95
CALCOCO2-208ENST00000506971 SKOR1P84550 965 aa9.13□□□□□ -0.95
CALCOCO2-208ENST00000506971 AGERQ15109 404 aa9.13□□□□□ -0.95
CALCOCO2-208ENST00000506971 PROCA1Q8NCQ7 364 aaPredicted RBP9.13□□□□□ -0.95
CALCOCO2-208ENST00000506971 DESI1Q6ICB0 168 aa9.12□□□□□ -0.95
CALCOCO2-208ENST00000506971 LYPD8Q6UX82 237 aa9.12□□□□□ -0.95
CALCOCO2-208ENST00000506971 MAP10Q9P2G4 905 aa9.12□□□□□ -0.95
CALCOCO2-208ENST00000506971 PER1O15534 1290 aaPredicted RBP9.11□□□□□ -0.95
CALCOCO2-208ENST00000506971 LILRB3O75022 631 aa9.11□□□□□ -0.95
CALCOCO2-208ENST00000506971 ALDH1A1P00352 501 aa9.11□□□□□ -0.95
CALCOCO2-208ENST00000506971 WNT7BP56706 349 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 222.6 ms