RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 TRIM32Q13049 653 aa8.22□□□□□ -1.09
TOPBP1-205ENST00000506779 THAP11Q96EK4 314 aa8.22□□□□□ -1.09
TOPBP1-205ENST00000506779 REPIN1Q9BWE0 567 aaKnown RBP8.21□□□□□ -1.1
TOPBP1-205ENST00000506779 RCCD1A6NED2 376 aa8.2□□□□□ -1.1
TOPBP1-205ENST00000506779 RBM46Q8TBY0 533 aaKnown RBP8.2□□□□□ -1.1
TOPBP1-205ENST00000506779 PRDM9Q9NQV7 894 aa8.2□□□□□ -1.1
TOPBP1-205ENST00000506779 ADAM23O75077 832 aa8.18□□□□□ -1.1
TOPBP1-205ENST00000506779 FOXK2Q01167 660 aa8.18□□□□□ -1.1
TOPBP1-205ENST00000506779 CAPN5O15484 640 aaPredicted RBP8.17□□□□□ -1.1
TOPBP1-205ENST00000506779 FMNL1O95466 1100 aaPredicted RBP8.16□□□□□ -1.1
TOPBP1-205ENST00000506779 MORN1Q5T089 497 aa8.16□□□□□ -1.1
TOPBP1-205ENST00000506779 ZFP42Q96MM3 310 aa8.16□□□□□ -1.1
TOPBP1-205ENST00000506779 ALDH1A1P00352 501 aa8.15□□□□□ -1.1
TOPBP1-205ENST00000506779 RC3H1Q5TC82 1133 aaKnown RBP8.15□□□□□ -1.1
TOPBP1-205ENST00000506779 ADGRG1Q9Y653 693 aa8.15□□□□□ -1.1
TOPBP1-205ENST00000506779 IRS1P35568 1242 aa8.14□□□□□ -1.11
TOPBP1-205ENST00000506779 ARIH1Q9Y4X5 557 aaPredicted RBP8.11□□□□□ -1.11
TOPBP1-205ENST00000506779 FECHP22830 423 aa8.1□□□□□ -1.11
TOPBP1-205ENST00000506779 SLC27A5Q9Y2P5 690 aa8.1□□□□□ -1.11
TOPBP1-205ENST00000506779 SALL2Q9Y467 1007 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-205ENST00000506779 SOBPA7XYQ1 873 aa8.09□□□□□ -1.11
TOPBP1-205ENST00000506779 SKOR1P84550 965 aa8.09□□□□□ -1.11
TOPBP1-205ENST00000506779 FAM161AQ3B820 660 aa8.09□□□□□ -1.11
TOPBP1-205ENST00000506779 MSS51Q4VC12 460 aa8.09□□□□□ -1.11
TOPBP1-205ENST00000506779 RSPH4AQ5TD94 716 aa8.09□□□□□ -1.11
TOPBP1-205ENST00000506779 BRICD5Q6PL45 260 aa8.09□□□□□ -1.11
TOPBP1-205ENST00000506779 DCAF8L2P0C7V8 631 aa8.08□□□□□ -1.12
TOPBP1-205ENST00000506779 LCE3BQ5TA77 95 aa8.08□□□□□ -1.12
TOPBP1-205ENST00000506779 KANK3Q6NY19 840 aa8.08□□□□□ -1.12
TOPBP1-205ENST00000506779 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.07□□□□□ -1.12
TOPBP1-205ENST00000506779 Q8N3U1 123 aa8.07□□□□□ -1.12
TOPBP1-205ENST00000506779 WNT7BP56706 349 aa8.06□□□□□ -1.12
TOPBP1-205ENST00000506779 KRT76Q01546 638 aa8.06□□□□□ -1.12
TOPBP1-205ENST00000506779 FUT2Q10981 343 aa8.06□□□□□ -1.12
TOPBP1-205ENST00000506779 ATP6V1AP38606 617 aa8.05□□□□□ -1.12
TOPBP1-205ENST00000506779 MSTNO14793 375 aa8.04□□□□□ -1.12
TOPBP1-205ENST00000506779 SIAH2O43255 324 aa8.04□□□□□ -1.12
TOPBP1-205ENST00000506779 PPFIA3O75145 1194 aa8.04□□□□□ -1.12
TOPBP1-205ENST00000506779 ZNF385CQ66K41 422 aaPredicted RBP8.04□□□□□ -1.12
TOPBP1-205ENST00000506779 WASF2Q9Y6W5 498 aa8.04□□□□□ -1.12
TOPBP1-205ENST00000506779 MMP16P51512 607 aa8.03□□□□□ -1.12
TOPBP1-205ENST00000506779 CNTNAP3BQ96NU0 1288 aa8.03□□□□□ -1.12
TOPBP1-205ENST00000506779 CNTNAP3Q9BZ76 1288 aa8.03□□□□□ -1.12
TOPBP1-205ENST00000506779 PTGDRQ13258 359 aa8.02□□□□□ -1.13
TOPBP1-205ENST00000506779 SCARF1Q14162 830 aa8.02□□□□□ -1.13
TOPBP1-205ENST00000506779 E2F4Q16254 413 aa8.02□□□□□ -1.13
TOPBP1-205ENST00000506779 RNF19BQ6ZMZ0 732 aa8.02□□□□□ -1.13
TOPBP1-205ENST00000506779 PURBQ96QR8 312 aaKnown RBP8.02□□□□□ -1.13
TOPBP1-205ENST00000506779 MRPL14Q6P1L8 145 aaKnown RBP8.01□□□□□ -1.13
TOPBP1-205ENST00000506779 SVOPQ8N4V2 548 aa8.01□□□□□ -1.13
TOPBP1-205ENST00000506779 SPOCK3Q9BQ16 436 aa8□□□□□ -1.13
TOPBP1-205ENST00000506779 MARSP56192 900 aaKnown RBP7.99□□□□□ -1.13
TOPBP1-205ENST00000506779 GPR161Q8N6U8 529 aaKnown RBP7.99□□□□□ -1.13
TOPBP1-205ENST00000506779 ARHGEF15O94989 841 aa7.98□□□□□ -1.13
TOPBP1-205ENST00000506779 KRTAP4-12Q9BQ66 201 aa7.98□□□□□ -1.13
TOPBP1-205ENST00000506779 KRTAP9-9Q9BYP9 154 aa7.98□□□□□ -1.13
TOPBP1-205ENST00000506779 KRTAP9-4Q9BYQ2 154 aa7.98□□□□□ -1.13
TOPBP1-205ENST00000506779 PLA2G4EQ3MJ16 856 aa7.97□□□□□ -1.13
TOPBP1-205ENST00000506779 SCARF2Q96GP6 870 aaPredicted RBP7.97□□□□□ -1.13
TOPBP1-205ENST00000506779 CCDC24Q8N4L8 307 aa7.96□□□□□ -1.14
TOPBP1-205ENST00000506779 RDH13Q8NBN7 331 aa7.96□□□□□ -1.14
TOPBP1-205ENST00000506779 EHBP1Q8NDI1 1231 aa7.96□□□□□ -1.14
TOPBP1-205ENST00000506779 WHAMMQ8TF30 809 aa7.96□□□□□ -1.14
TOPBP1-205ENST00000506779 MAN1A2O60476 641 aa7.95□□□□□ -1.14
TOPBP1-205ENST00000506779 DXOO77932 396 aaKnown RBP7.95□□□□□ -1.14
TOPBP1-205ENST00000506779 PXYLP1Q8TE99 480 aa7.95□□□□□ -1.14
TOPBP1-205ENST00000506779 K7ELQ4 463 aaPredicted RBP7.94□□□□□ -1.14
TOPBP1-205ENST00000506779 ITGB2P05107 769 aa7.93□□□□□ -1.14
TOPBP1-205ENST00000506779 COL25A1Q9BXS0 654 aaPredicted RBP7.93□□□□□ -1.14
TOPBP1-205ENST00000506779 KRTAP4-8A0A0G2JLE6 195 aa7.92□□□□□ -1.14
TOPBP1-205ENST00000506779 BTBD11A6QL63 1104 aa7.92□□□□□ -1.14
TOPBP1-205ENST00000506779 PROCP04070 461 aa7.92□□□□□ -1.14
TOPBP1-205ENST00000506779 OATP04181 439 aa7.91□□□□□ -1.14
TOPBP1-205ENST00000506779 GCGRP47871 477 aa7.91□□□□□ -1.14
TOPBP1-205ENST00000506779 SLURP2P0DP57 97 aa7.9□□□□□ -1.14
TOPBP1-205ENST00000506779 Q3C1V9 767 aa7.89□□□□□ -1.15
TOPBP1-205ENST00000506779 RNFT1Q5M7Z0 435 aa7.89□□□□□ -1.15
TOPBP1-205ENST00000506779 GALNT6Q8NCL4 622 aa7.89□□□□□ -1.15
TOPBP1-205ENST00000506779 DCAF5Q96JK2 942 aa7.89□□□□□ -1.15
TOPBP1-205ENST00000506779 TIMP2P16035 220 aa7.88□□□□□ -1.15
TOPBP1-205ENST00000506779 USB1Q9BQ65 265 aaKnown RBP7.88□□□□□ -1.15
TOPBP1-205ENST00000506779 DDX11L8A8MPP1 907 aa7.87□□□□□ -1.15
TOPBP1-205ENST00000506779 DAXXQ9UER7 740 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-205ENST00000506779 NNTQ13423 1086 aa7.86□□□□□ -1.15
TOPBP1-205ENST00000506779 METTL3Q86U44 580 aaKnown RBP7.86□□□□□ -1.15
TOPBP1-205ENST00000506779 WDR4P57081 412 aaKnown RBP7.85□□□□□ -1.15
TOPBP1-205ENST00000506779 GRIPAP1Q4V328 841 aa7.85□□□□□ -1.15
TOPBP1-205ENST00000506779 ADH1CP00326 375 aa7.84□□□□□ -1.15
TOPBP1-205ENST00000506779 C6orf118Q5T5N4 469 aa7.84□□□□□ -1.15
TOPBP1-205ENST00000506779 MLLT3P42568 568 aaPredicted RBP7.83□□□□□ -1.16
TOPBP1-205ENST00000506779 KLF16Q9BXK1 252 aaPredicted RBP7.83□□□□□ -1.16
TOPBP1-205ENST00000506779 TLL2Q9Y6L7 1015 aa7.83□□□□□ -1.16
TOPBP1-205ENST00000506779 NUTM2FA1L443 756 aa7.82□□□□□ -1.16
TOPBP1-205ENST00000506779 NANOS1Q8WY41 292 aaKnown RBP7.82□□□□□ -1.16
TOPBP1-205ENST00000506779 SH3BP2P78314 561 aa7.81□□□□□ -1.16
TOPBP1-205ENST00000506779 PTCRAQ6ISU1 281 aaPredicted RBP7.81□□□□□ -1.16
TOPBP1-205ENST00000506779 PLEKHG3A1L390 1219 aa7.8□□□□□ -1.16
TOPBP1-205ENST00000506779 DNMT3LQ9UJW3 386 aa7.8□□□□□ -1.16
TOPBP1-205ENST00000506779 WDR70Q9NW82 654 aa7.79□□□□□ -1.16
TOPBP1-205ENST00000506779 PHF20L1A8MW92 1017 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms