RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 IFT172Q9UG01 1749 aa19.41■□□□□ 0.7
HERC6-206ENST00000506714 BCAR3O75815 825 aa19.41■□□□□ 0.7
HERC6-206ENST00000506714 AAMPQ13685 434 aa19.4■□□□□ 0.7
HERC6-206ENST00000506714 SBNO2Q9Y2G9 1366 aa19.39■□□□□ 0.7
HERC6-206ENST00000506714 EFCAB6Q5THR3 1501 aa19.39■□□□□ 0.7
HERC6-206ENST00000506714 MAPK8IP3Q9UPT6 1336 aa19.39■□□□□ 0.7
HERC6-206ENST00000506714 CENPJQ9HC77 1338 aaPredicted RBP19.38■□□□□ 0.69
HERC6-206ENST00000506714 YEATS2Q9ULM3 1422 aa19.38■□□□□ 0.69
HERC6-206ENST00000506714 CARD14Q9BXL6 1004 aa19.36■□□□□ 0.69
HERC6-206ENST00000506714 LMTK2Q8IWU2 1503 aa19.36■□□□□ 0.69
HERC6-206ENST00000506714 CFAP70Q5T0N1 1121 aa19.36■□□□□ 0.69
HERC6-206ENST00000506714 CLUAP1Q96AJ1 413 aa19.36■□□□□ 0.69
HERC6-206ENST00000506714 GGT6Q6P531 493 aa19.35■□□□□ 0.69
HERC6-206ENST00000506714 IGHDP01880 384 aa19.35■□□□□ 0.69
HERC6-206ENST00000506714 WWC1Q8IX03 1113 aa19.35■□□□□ 0.69
HERC6-206ENST00000506714 CANXP27824 592 aaKnown RBP19.34■□□□□ 0.69
HERC6-206ENST00000506714 SETBP1Q9Y6X0 1596 aa19.34■□□□□ 0.69
HERC6-206ENST00000506714 NRXN1Q9ULB1 1477 aa19.33■□□□□ 0.69
HERC6-206ENST00000506714 SHPRHQ149N8 1683 aa19.33■□□□□ 0.69
HERC6-206ENST00000506714 FRAT1Q92837 279 aaPredicted RBP19.33■□□□□ 0.68
HERC6-206ENST00000506714 ZMYM3Q14202 1370 aa19.32■□□□□ 0.68
HERC6-206ENST00000506714 DMRT2Q9Y5R5 561 aa19.31■□□□□ 0.68
HERC6-206ENST00000506714 ADGRF5Q8IZF2 1346 aa19.31■□□□□ 0.68
HERC6-206ENST00000506714 CFAP65Q6ZU64 1925 aaKnown RBP19.31■□□□□ 0.68
HERC6-206ENST00000506714 BECN1Q14457 450 aa19.31■□□□□ 0.68
HERC6-206ENST00000506714 PMFBP1Q8TBY8 1022 aa19.31■□□□□ 0.68
HERC6-206ENST00000506714 ABCC3O15438 1527 aa19.3■□□□□ 0.68
HERC6-206ENST00000506714 RUNDC1Q96C34 613 aa19.3■□□□□ 0.68
HERC6-206ENST00000506714 CAMSAP1Q5T5Y3 1602 aa19.3■□□□□ 0.68
HERC6-206ENST00000506714 MROH2AA6NES4 1674 aa19.3■□□□□ 0.68
HERC6-206ENST00000506714 ZC3H13Q5T200 1668 aaKnown RBP19.29■□□□□ 0.68
HERC6-206ENST00000506714 USP32Q8NFA0 1604 aa19.29■□□□□ 0.68
HERC6-206ENST00000506714 USP19O94966 1318 aa19.29■□□□□ 0.68
HERC6-206ENST00000506714 FRAT2O75474 233 aaPredicted RBP19.29■□□□□ 0.68
HERC6-206ENST00000506714 WDR63Q8IWG1 891 aa19.28■□□□□ 0.68
HERC6-206ENST00000506714 COG6Q9Y2V7 657 aa19.28■□□□□ 0.68
HERC6-206ENST00000506714 UGGT1Q9NYU2 1555 aa19.28■□□□□ 0.68
HERC6-206ENST00000506714 NCBP3Q53F19 620 aaKnown RBP19.28■□□□□ 0.68
HERC6-206ENST00000506714 MORC1Q86VD1 984 aa19.28■□□□□ 0.68
HERC6-206ENST00000506714 PANK1Q8TE04 598 aa19.27■□□□□ 0.68
HERC6-206ENST00000506714 IQSEC2Q5JU85 1478 aa19.26■□□□□ 0.67
HERC6-206ENST00000506714 QRICH2Q9H0J4 1663 aa19.26■□□□□ 0.67
HERC6-206ENST00000506714 RARSP54136 660 aaKnown RBP19.26■□□□□ 0.67
HERC6-206ENST00000506714 NPATQ14207 1427 aa19.26■□□□□ 0.67
HERC6-206ENST00000506714 NSD3Q9BZ95 1437 aa19.26■□□□□ 0.67
HERC6-206ENST00000506714 CCDC27Q2M243 656 aa19.25■□□□□ 0.67
HERC6-206ENST00000506714 BRPF3Q9ULD4 1205 aa19.25■□□□□ 0.67
HERC6-206ENST00000506714 REREQ9P2R6 1566 aa19.25■□□□□ 0.67
HERC6-206ENST00000506714 ADGRB3O60242 1522 aa19.24■□□□□ 0.67
HERC6-206ENST00000506714 PPLO60437 1756 aa19.23■□□□□ 0.67
HERC6-206ENST00000506714 ARHGEF40Q8TER5 1519 aa19.23■□□□□ 0.67
HERC6-206ENST00000506714 UPF2Q9HAU5 1272 aaKnown RBP19.23■□□□□ 0.67
HERC6-206ENST00000506714 TCP11L2Q8N4U5 519 aa19.23■□□□□ 0.67
HERC6-206ENST00000506714 CFAP53Q96M91 514 aa19.22■□□□□ 0.67
HERC6-206ENST00000506714 NLRP1Q9C000 1473 aa19.21■□□□□ 0.67
HERC6-206ENST00000506714 NOS1P29475 1434 aa19.21■□□□□ 0.67
HERC6-206ENST00000506714 RWDD1Q9H446 243 aaPredicted RBP19.21■□□□□ 0.67
HERC6-206ENST00000506714 SIGLEC1Q9BZZ2 1709 aa19.2■□□□□ 0.66
HERC6-206ENST00000506714 SEC24BO95487 1268 aa19.2■□□□□ 0.66
HERC6-206ENST00000506714 PUS7Q96PZ0 661 aaKnown RBP19.2■□□□□ 0.66
HERC6-206ENST00000506714 ANO8Q9HCE9 1232 aaPredicted RBP19.2■□□□□ 0.66
HERC6-206ENST00000506714 NEUROD2Q15784 382 aa19.19■□□□□ 0.66
HERC6-206ENST00000506714 MYH16Q9H6N6 1097 aa19.19■□□□□ 0.66
HERC6-206ENST00000506714 C14orf93Q9H972 538 aaKnown RBP19.19■□□□□ 0.66
HERC6-206ENST00000506714 AGLP35573 1532 aa19.19■□□□□ 0.66
HERC6-206ENST00000506714 NSD2O96028 1365 aa19.18■□□□□ 0.66
HERC6-206ENST00000506714 KCNA4P22459 653 aa19.17■□□□□ 0.66
HERC6-206ENST00000506714 SLC12A5Q9H2X9 1139 aa19.17■□□□□ 0.66
HERC6-206ENST00000506714 PCDHB15Q9Y5E8 787 aa19.17■□□□□ 0.66
HERC6-206ENST00000506714 ADGRB1O14514 1584 aa19.17■□□□□ 0.66
HERC6-206ENST00000506714 CT47B1P0C2W7 299 aaPredicted RBP19.17■□□□□ 0.66
HERC6-206ENST00000506714 RRP7AQ9Y3A4 280 aaKnown RBP19.17■□□□□ 0.66
HERC6-206ENST00000506714 TRAK1Q9UPV9 953 aa19.16■□□□□ 0.66
HERC6-206ENST00000506714 RPGRIP1LQ68CZ1 1315 aa19.16■□□□□ 0.66
HERC6-206ENST00000506714 MTHFSP49914 203 aa19.16■□□□□ 0.66
HERC6-206ENST00000506714 TBC1D32Q96NH3 1257 aa19.16■□□□□ 0.66
HERC6-206ENST00000506714 PDZRN3Q9UPQ7 1066 aa19.16■□□□□ 0.66
HERC6-206ENST00000506714 ARHGAP31Q2M1Z3 1444 aa19.16■□□□□ 0.66
HERC6-206ENST00000506714 RLBP1P12271 317 aa19.14■□□□□ 0.66
HERC6-206ENST00000506714 TNNT2P45379 298 aaPredicted RBP19.14■□□□□ 0.66
HERC6-206ENST00000506714 ADGRB2O60241 1585 aa19.14■□□□□ 0.65
HERC6-206ENST00000506714 PREX1Q8TCU6 1659 aa19.13■□□□□ 0.65
HERC6-206ENST00000506714 PIK3C2BO00750 1634 aa19.13■□□□□ 0.65
HERC6-206ENST00000506714 CLTCQ00610 1675 aaKnown RBP19.12■□□□□ 0.65
HERC6-206ENST00000506714 MVPQ14764 893 aaKnown RBP19.12■□□□□ 0.65
HERC6-206ENST00000506714 ANTXR1Q9H6X2 564 aa19.12■□□□□ 0.65
HERC6-206ENST00000506714 CHGAP10645 457 aaKnown RBP19.12■□□□□ 0.65
HERC6-206ENST00000506714 ZKSCAN2Q63HK3 967 aa19.12■□□□□ 0.65
HERC6-206ENST00000506714 ANKRD36BQ8N2N9 1353 aa19.11■□□□□ 0.65
HERC6-206ENST00000506714 TRHP20396 242 aaPredicted RBP19.11■□□□□ 0.65
HERC6-206ENST00000506714 FAM43AQ8N2R8 423 aa19.11■□□□□ 0.65
HERC6-206ENST00000506714 EVC2Q86UK5 1308 aa19.1■□□□□ 0.65
HERC6-206ENST00000506714 SLKQ9H2G2 1235 aaPredicted RBP19.1■□□□□ 0.65
HERC6-206ENST00000506714 L1TD1Q5T7N2 865 aaKnown RBP19.09■□□□□ 0.65
HERC6-206ENST00000506714 DZIP1LQ8IYY4 767 aaKnown RBP19.09■□□□□ 0.65
HERC6-206ENST00000506714 ARHGEF28Q8N1W1 1705 aaKnown RBP19.09■□□□□ 0.65
HERC6-206ENST00000506714 FTSJ3Q8IY81 847 aaKnown RBP19.08■□□□□ 0.65
HERC6-206ENST00000506714 BCL2L13Q9BXK5 485 aa19.08■□□□□ 0.65
HERC6-206ENST00000506714 U2AF1L5P0DN76 240 aaPredicted RBP19.08■□□□□ 0.64
HERC6-206ENST00000506714 U2AF1Q01081 240 aaKnown RBP eCLIP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms