RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 KDM5AP29375 1690 aaKnown RBP8.34□□□□□ -1.07
USP46-206ENST00000506707 SCAF11Q99590 1463 aaKnown RBP8.34□□□□□ -1.07
USP46-206ENST00000506707 VGFO15240 615 aaPredicted RBP8.34□□□□□ -1.07
USP46-206ENST00000506707 PPP1R15AO75807 674 aaPredicted RBP8.34□□□□□ -1.07
USP46-206ENST00000506707 CDAN1Q8IWY9 1227 aa8.34□□□□□ -1.07
USP46-206ENST00000506707 SIN3AQ96ST3 1273 aa8.34□□□□□ -1.07
USP46-206ENST00000506707 TRPC6Q9Y210 931 aa8.34□□□□□ -1.07
USP46-206ENST00000506707 NPHP4O75161 1426 aaPredicted RBP8.34□□□□□ -1.07
USP46-206ENST00000506707 SLC26A8Q96RN1 970 aa8.33□□□□□ -1.08
USP46-206ENST00000506707 PLEKHG1Q9ULL1 1385 aa8.33□□□□□ -1.08
USP46-206ENST00000506707 NEURL4Q96JN8 1562 aa8.32□□□□□ -1.08
USP46-206ENST00000506707 SEC24BO95487 1268 aa8.32□□□□□ -1.08
USP46-206ENST00000506707 TBX22Q9Y458 520 aa8.32□□□□□ -1.08
USP46-206ENST00000506707 ADGRF5Q8IZF2 1346 aa8.31□□□□□ -1.08
USP46-206ENST00000506707 MAP3K13O43283 966 aa8.31□□□□□ -1.08
USP46-206ENST00000506707 NEUROD1Q13562 356 aa8.31□□□□□ -1.08
USP46-206ENST00000506707 BCANQ96GW7 911 aa8.31□□□□□ -1.08
USP46-206ENST00000506707 ZNF335Q9H4Z2 1342 aaPredicted RBP8.3□□□□□ -1.08
USP46-206ENST00000506707 NEXMIFQ5QGS0 1516 aa8.3□□□□□ -1.08
USP46-206ENST00000506707 TTLL13PA6NNM8 815 aa8.3□□□□□ -1.08
USP46-206ENST00000506707 PLEKHG5O94827 1062 aa8.3□□□□□ -1.08
USP46-206ENST00000506707 PROM2Q8N271 834 aa8.3□□□□□ -1.08
USP46-206ENST00000506707 DCAF11Q8TEB1 546 aa8.3□□□□□ -1.08
USP46-206ENST00000506707 ADAMTS13Q76LX8 1427 aa8.29□□□□□ -1.08
USP46-206ENST00000506707 IER5LQ5T953 404 aa8.29□□□□□ -1.08
USP46-206ENST00000506707 L3MBTL2Q969R5 705 aa8.29□□□□□ -1.08
USP46-206ENST00000506707 STAC3Q96MF2 364 aa8.29□□□□□ -1.08
USP46-206ENST00000506707 COLQQ9Y215 455 aaPredicted RBP8.29□□□□□ -1.08
USP46-206ENST00000506707 KDM2AQ9Y2K7 1162 aa8.29□□□□□ -1.08
USP46-206ENST00000506707 KCNA6P17658 529 aa8.28□□□□□ -1.08
USP46-206ENST00000506707 MYO5BQ9ULV0 1848 aa8.28□□□□□ -1.08
USP46-206ENST00000506707 KIF1BO60333 1816 aa8.27□□□□□ -1.09
USP46-206ENST00000506707 METP08581 1390 aa8.27□□□□□ -1.09
USP46-206ENST00000506707 C14orf93Q9H972 538 aaKnown RBP8.27□□□□□ -1.09
USP46-206ENST00000506707 IQGAP1P46940 1657 aa8.27□□□□□ -1.09
USP46-206ENST00000506707 CLSPNQ9HAW4 1339 aa8.27□□□□□ -1.09
USP46-206ENST00000506707 LTBP4Q8N2S1 1624 aa8.26□□□□□ -1.09
USP46-206ENST00000506707 CFAP70Q5T0N1 1121 aa8.26□□□□□ -1.09
USP46-206ENST00000506707 CCER1Q8TC90 406 aaPredicted RBP8.26□□□□□ -1.09
USP46-206ENST00000506707 CERKQ8TCT0 537 aa8.26□□□□□ -1.09
USP46-206ENST00000506707 AMOTL2Q9Y2J4 779 aa8.26□□□□□ -1.09
USP46-206ENST00000506707 POLR1AO95602 1720 aaPredicted RBP8.26□□□□□ -1.09
USP46-206ENST00000506707 NRXN1Q9ULB1 1477 aa8.26□□□□□ -1.09
USP46-206ENST00000506707 PIK3R4Q99570 1358 aa8.25□□□□□ -1.09
USP46-206ENST00000506707 TMEM132EQ6IEE7 984 aa8.25□□□□□ -1.09
USP46-206ENST00000506707 RASEFQ8IZ41 740 aa8.25□□□□□ -1.09
USP46-206ENST00000506707 SGIP1Q9BQI5 828 aa8.25□□□□□ -1.09
USP46-206ENST00000506707 TRIM35Q9UPQ4 493 aa8.25□□□□□ -1.09
USP46-206ENST00000506707 PIK3C2GO75747 1445 aa8.25□□□□□ -1.09
USP46-206ENST00000506707 PTPRUQ92729 1446 aa8.25□□□□□ -1.09
USP46-206ENST00000506707 SETBP1Q9Y6X0 1596 aa8.25□□□□□ -1.09
USP46-206ENST00000506707 SLAIN1Q8ND83 568 aa8.24□□□□□ -1.09
USP46-206ENST00000506707 RBM33Q96EV2 1170 aaKnown RBP8.24□□□□□ -1.09
USP46-206ENST00000506707 NRXN3Q9Y4C0 1643 aa8.24□□□□□ -1.09
USP46-206ENST00000506707 MYOM2P54296 1465 aa8.24□□□□□ -1.09
USP46-206ENST00000506707 PPLO60437 1756 aa8.23□□□□□ -1.09
USP46-206ENST00000506707 ALKQ9UM73 1620 aa8.23□□□□□ -1.09
USP46-206ENST00000506707 ST18O60284 1047 aa8.23□□□□□ -1.09
USP46-206ENST00000506707 PROSER2Q86WR7 435 aaPredicted RBP8.23□□□□□ -1.09
USP46-206ENST00000506707 NBPF1Q3BBV0 1214 aa8.22□□□□□ -1.09
USP46-206ENST00000506707 NBPF8Q3BBV2 869 aa8.22□□□□□ -1.09
USP46-206ENST00000506707 LRRC7Q96NW7 1537 aa8.22□□□□□ -1.09
USP46-206ENST00000506707 DIP2AQ14689 1571 aa8.22□□□□□ -1.09
USP46-206ENST00000506707 CPS1P31327 1500 aa8.21□□□□□ -1.1
USP46-206ENST00000506707 STK26Q9P289 416 aa8.21□□□□□ -1.1
USP46-206ENST00000506707 TIMELESSQ9UNS1 1208 aa8.21□□□□□ -1.1
USP46-206ENST00000506707 TMEM94Q12767 1356 aa8.21□□□□□ -1.1
USP46-206ENST00000506707 TONSLQ96HA7 1378 aa8.21□□□□□ -1.1
USP46-206ENST00000506707 ABCC11Q96J66 1382 aa8.21□□□□□ -1.1
USP46-206ENST00000506707 PRAG1Q86YV5 1406 aa8.2□□□□□ -1.1
USP46-206ENST00000506707 IFT172Q9UG01 1749 aa8.2□□□□□ -1.1
USP46-206ENST00000506707 SIRT1Q96EB6 747 aa8.2□□□□□ -1.1
USP46-206ENST00000506707 PCDHB13Q9Y5F0 798 aa8.2□□□□□ -1.1
USP46-206ENST00000506707 LRPPRCP42704 1394 aaKnown RBP8.2□□□□□ -1.1
USP46-206ENST00000506707 ROBO2Q9HCK4 1378 aa8.2□□□□□ -1.1
USP46-206ENST00000506707 STRCP1A6NGW2 1772 aa8.2□□□□□ -1.1
USP46-206ENST00000506707 WAPLQ7Z5K2 1190 aa8.19□□□□□ -1.1
USP46-206ENST00000506707 MIER1Q8N108 512 aa8.19□□□□□ -1.1
USP46-206ENST00000506707 YTHDC2Q9H6S0 1430 aaKnown RBP8.19□□□□□ -1.1
USP46-206ENST00000506707 NCOA3Q9Y6Q9 1424 aa8.19□□□□□ -1.1
USP46-206ENST00000506707 NKTRP30414 1462 aaKnown RBP8.19□□□□□ -1.1
USP46-206ENST00000506707 ASXL1Q8IXJ9 1541 aa8.19□□□□□ -1.1
USP46-206ENST00000506707 NWD1Q149M9 1564 aa8.18□□□□□ -1.1
USP46-206ENST00000506707 PLCG2P16885 1265 aa8.18□□□□□ -1.1
USP46-206ENST00000506707 C19orf44Q9H6X5 657 aa8.18□□□□□ -1.1
USP46-206ENST00000506707 TRAK1Q9UPV9 953 aa8.18□□□□□ -1.1
USP46-206ENST00000506707 TECPR2O15040 1411 aa8.18□□□□□ -1.1
USP46-206ENST00000506707 ADGRB1O14514 1584 aa8.18□□□□□ -1.1
USP46-206ENST00000506707 SETD1AO15047 1707 aaKnown RBP8.17□□□□□ -1.1
USP46-206ENST00000506707 CHD2O14647 1828 aaKnown RBP8.17□□□□□ -1.1
USP46-206ENST00000506707 MMRN1Q13201 1228 aa8.17□□□□□ -1.1
USP46-206ENST00000506707 TMEM121BQ9BXQ6 578 aaPredicted RBP8.17□□□□□ -1.1
USP46-206ENST00000506707 IQSEC2Q5JU85 1478 aa8.17□□□□□ -1.1
USP46-206ENST00000506707 UBAP1LF5GYI3 381 aa8.16□□□□□ -1.1
USP46-206ENST00000506707 TOM1O60784 492 aa8.16□□□□□ -1.1
USP46-206ENST00000506707 PTCH1Q13635 1447 aa8.16□□□□□ -1.1
USP46-206ENST00000506707 FAM135BQ49AJ0 1406 aa8.16□□□□□ -1.1
USP46-206ENST00000506707 FBXO41Q8TF61 875 aa8.16□□□□□ -1.1
USP46-206ENST00000506707 PRAM1Q96QH2 718 aa8.16□□□□□ -1.1
USP46-206ENST00000506707 PLEKHH1Q9ULM0 1364 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms