RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 NPATQ14207 1427 aa8.5□□□□□ -1.05
SCLT1-207ENST00000506233 MYOM2P54296 1465 aa8.5□□□□□ -1.05
SCLT1-207ENST00000506233 SHPRHQ149N8 1683 aa8.5□□□□□ -1.05
SCLT1-207ENST00000506233 SGIP1Q9BQI5 828 aa8.49□□□□□ -1.05
SCLT1-207ENST00000506233 SETBP1Q9Y6X0 1596 aa8.49□□□□□ -1.05
SCLT1-207ENST00000506233 SCAPERQ9BY12 1400 aa8.49□□□□□ -1.05
SCLT1-207ENST00000506233 NUP155O75694 1391 aa8.49□□□□□ -1.05
SCLT1-207ENST00000506233 CCDC7Q96M83 1385 aa8.49□□□□□ -1.05
SCLT1-207ENST00000506233 CAPN15O75808 1086 aa8.49□□□□□ -1.05
SCLT1-207ENST00000506233 HSPA5P11021 654 aaKnown RBP8.49□□□□□ -1.05
SCLT1-207ENST00000506233 RYDENQ9NUL5 291 aaKnown RBP8.49□□□□□ -1.05
SCLT1-207ENST00000506233 TESK2Q96S53 571 aa8.48□□□□□ -1.05
SCLT1-207ENST00000506233 CLTCQ00610 1675 aaKnown RBP8.48□□□□□ -1.05
SCLT1-207ENST00000506233 PYGBP11216 843 aa8.48□□□□□ -1.05
SCLT1-207ENST00000506233 CNTLNQ9NXG0 1405 aa8.48□□□□□ -1.05
SCLT1-207ENST00000506233 TRAK2O60296 914 aa8.48□□□□□ -1.05
SCLT1-207ENST00000506233 MLLT3P42568 568 aaPredicted RBP8.48□□□□□ -1.05
SCLT1-207ENST00000506233 CDK11AQ9UQ88 783 aaPredicted RBP8.48□□□□□ -1.05
SCLT1-207ENST00000506233 ACIN1Q9UKV3 1341 aaKnown RBP8.47□□□□□ -1.05
SCLT1-207ENST00000506233 RBM25P49756 843 aaKnown RBP8.47□□□□□ -1.05
SCLT1-207ENST00000506233 MFRPQ9BY79 579 aa8.47□□□□□ -1.05
SCLT1-207ENST00000506233 KIF7Q2M1P5 1343 aa8.47□□□□□ -1.05
SCLT1-207ENST00000506233 CD109Q6YHK3 1445 aa8.46□□□□□ -1.05
SCLT1-207ENST00000506233 RASEFQ8IZ41 740 aa8.46□□□□□ -1.05
SCLT1-207ENST00000506233 QRICH2Q9H0J4 1663 aa8.46□□□□□ -1.05
SCLT1-207ENST00000506233 CFAP65Q6ZU64 1925 aaKnown RBP8.46□□□□□ -1.05
SCLT1-207ENST00000506233 ARHGEF40Q8TER5 1519 aa8.46□□□□□ -1.06
SCLT1-207ENST00000506233 PTPRMP28827 1452 aa8.46□□□□□ -1.06
SCLT1-207ENST00000506233 PLEKHG5O94827 1062 aa8.45□□□□□ -1.06
SCLT1-207ENST00000506233 IRF5Q13568 498 aa8.45□□□□□ -1.06
SCLT1-207ENST00000506233 SPATA31D1Q6ZQQ2 1576 aa8.45□□□□□ -1.06
SCLT1-207ENST00000506233 AGLP35573 1532 aa8.45□□□□□ -1.06
SCLT1-207ENST00000506233 NCKAP5LQ9HCH0 1330 aa8.45□□□□□ -1.06
SCLT1-207ENST00000506233 PIK3C2GO75747 1445 aa8.45□□□□□ -1.06
SCLT1-207ENST00000506233 KDM5AP29375 1690 aaKnown RBP8.45□□□□□ -1.06
SCLT1-207ENST00000506233 TRAIPQ9BWF2 469 aa8.44□□□□□ -1.06
SCLT1-207ENST00000506233 ZNF777Q9ULD5 760 aaPredicted RBP8.44□□□□□ -1.06
SCLT1-207ENST00000506233 MARF1Q9Y4F3 1742 aaKnown RBP8.44□□□□□ -1.06
SCLT1-207ENST00000506233 DISP3Q9P2K9 1392 aa8.44□□□□□ -1.06
SCLT1-207ENST00000506233 PELP1Q8IZL8 1130 aaKnown RBP8.44□□□□□ -1.06
SCLT1-207ENST00000506233 ARHGAP31Q2M1Z3 1444 aa8.44□□□□□ -1.06
SCLT1-207ENST00000506233 RSPH4AQ5TD94 716 aa8.44□□□□□ -1.06
SCLT1-207ENST00000506233 SPDYE2BA6NHP3 402 aa8.43□□□□□ -1.06
SCLT1-207ENST00000506233 PER1O15534 1290 aaPredicted RBP8.43□□□□□ -1.06
SCLT1-207ENST00000506233 SPDYE6P0CI01 402 aa8.43□□□□□ -1.06
SCLT1-207ENST00000506233 SPDYE2Q495Y8 402 aa8.43□□□□□ -1.06
SCLT1-207ENST00000506233 TONSLQ96HA7 1378 aa8.43□□□□□ -1.06
SCLT1-207ENST00000506233 NBPF1Q3BBV0 1214 aa8.43□□□□□ -1.06
SCLT1-207ENST00000506233 USP32Q8NFA0 1604 aa8.43□□□□□ -1.06
SCLT1-207ENST00000506233 MFAP1P55081 439 aaKnown RBP8.43□□□□□ -1.06
SCLT1-207ENST00000506233 RETREG2Q8NC44 543 aa8.43□□□□□ -1.06
SCLT1-207ENST00000506233 UBR1Q8IWV7 1749 aa8.43□□□□□ -1.06
SCLT1-207ENST00000506233 ERVK-7P63135 1459 aa8.42□□□□□ -1.06
SCLT1-207ENST00000506233 MNX1P50219 401 aaPredicted RBP8.42□□□□□ -1.06
SCLT1-207ENST00000506233 KRI1Q8N9T8 703 aaKnown RBP8.42□□□□□ -1.06
SCLT1-207ENST00000506233 TULP4Q9NRJ4 1543 aa8.41□□□□□ -1.06
SCLT1-207ENST00000506233 POM121Q96HA1 1249 aa8.41□□□□□ -1.06
SCLT1-207ENST00000506233 USP47Q96K76 1375 aa8.41□□□□□ -1.06
SCLT1-207ENST00000506233 ZBTB12Q9Y330 459 aaPredicted RBP8.41□□□□□ -1.06
SCLT1-207ENST00000506233 GPIHBP1Q8IV16 184 aa8.41□□□□□ -1.06
SCLT1-207ENST00000506233 GZF1Q9H116 711 aaPredicted RBP8.41□□□□□ -1.06
SCLT1-207ENST00000506233 EIF5BO60841 1220 aaKnown RBP8.4□□□□□ -1.06
SCLT1-207ENST00000506233 CHRM1P11229 460 aaPredicted RBP8.4□□□□□ -1.06
SCLT1-207ENST00000506233 CD163L1Q9NR16 1453 aa8.4□□□□□ -1.07
SCLT1-207ENST00000506233 KNDC1Q76NI1 1749 aa8.4□□□□□ -1.07
SCLT1-207ENST00000506233 DDX10Q13206 875 aaKnown RBP8.39□□□□□ -1.07
SCLT1-207ENST00000506233 C3P01024 1663 aa8.39□□□□□ -1.07
SCLT1-207ENST00000506233 ANKRD26Q9UPS8 1709 aa8.39□□□□□ -1.07
SCLT1-207ENST00000506233 TMCO4Q5TGY1 634 aa8.38□□□□□ -1.07
SCLT1-207ENST00000506233 LRPPRCP42704 1394 aaKnown RBP8.38□□□□□ -1.07
SCLT1-207ENST00000506233 A6NJR5 290 aa8.38□□□□□ -1.07
SCLT1-207ENST00000506233 EFCAB2Q5VUJ9 269 aa8.38□□□□□ -1.07
SCLT1-207ENST00000506233 NLRP1Q9C000 1473 aa8.38□□□□□ -1.07
SCLT1-207ENST00000506233 NRKQ7Z2Y5 1582 aa8.38□□□□□ -1.07
SCLT1-207ENST00000506233 FAM212AQ96EL1 285 aa8.38□□□□□ -1.07
SCLT1-207ENST00000506233 TOPAZ1Q8N9V7 1692 aa8.37□□□□□ -1.07
SCLT1-207ENST00000506233 FLIIQ13045 1269 aa8.37□□□□□ -1.07
SCLT1-207ENST00000506233 GPR37O15354 613 aa8.37□□□□□ -1.07
SCLT1-207ENST00000506233 CCDC144AA2RUR9 1427 aa8.36□□□□□ -1.07
SCLT1-207ENST00000506233 MCM6Q14566 821 aa8.36□□□□□ -1.07
SCLT1-207ENST00000506233 RAPGEF3O95398 923 aa8.36□□□□□ -1.07
SCLT1-207ENST00000506233 ZFYVE9O95405 1425 aa8.36□□□□□ -1.07
SCLT1-207ENST00000506233 PARD3Q8TEW0 1356 aa8.35□□□□□ -1.07
SCLT1-207ENST00000506233 FNBP4Q8N3X1 1017 aaPredicted RBP8.35□□□□□ -1.07
SCLT1-207ENST00000506233 TRIM52Q96A61 297 aa8.35□□□□□ -1.07
SCLT1-207ENST00000506233 PARP9Q8IXQ6 854 aa8.34□□□□□ -1.07
SCLT1-207ENST00000506233 SPAG9O60271 1321 aaKnown RBP8.34□□□□□ -1.07
SCLT1-207ENST00000506233 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.34□□□□□ -1.07
SCLT1-207ENST00000506233 ADGRF5Q8IZF2 1346 aa8.34□□□□□ -1.07
SCLT1-207ENST00000506233 PRKRIP1Q9H875 184 aaPredicted RBP8.33□□□□□ -1.08
SCLT1-207ENST00000506233 ALKQ9UM73 1620 aa8.33□□□□□ -1.08
SCLT1-207ENST00000506233 AKAP12Q02952 1782 aa8.33□□□□□ -1.08
SCLT1-207ENST00000506233 CCER2I3L3R5 266 aa8.33□□□□□ -1.08
SCLT1-207ENST00000506233 MED14O60244 1454 aa8.32□□□□□ -1.08
SCLT1-207ENST00000506233 SCAF11Q99590 1463 aaKnown RBP8.31□□□□□ -1.08
SCLT1-207ENST00000506233 TSPY4P0CV99 314 aa8.31□□□□□ -1.08
SCLT1-207ENST00000506233 TSPY10P0CW01 314 aa8.31□□□□□ -1.08
SCLT1-207ENST00000506233 A2ML1A8K2U0 1454 aa8.31□□□□□ -1.08
SCLT1-207ENST00000506233 ST20-MTHFSA0A0A6YYL1 179 aa8.31□□□□□ -1.08
SCLT1-207ENST00000506233 MON2Q7Z3U7 1717 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms