RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 DHX57Q6P158 1386 aaKnown RBP3.26□□□□□ -1.89
NEDD4-205ENST00000506154 ARHGEF28Q8N1W1 1705 aaKnown RBP3.26□□□□□ -1.89
NEDD4-205ENST00000506154 WASHC2AQ641Q2 1341 aa3.26□□□□□ -1.89
NEDD4-205ENST00000506154 RFX1P22670 979 aa3.26□□□□□ -1.89
NEDD4-205ENST00000506154 PCGF6Q9BYE7 350 aa3.26□□□□□ -1.89
NEDD4-205ENST00000506154 PCDHB8Q9UN66 801 aa3.26□□□□□ -1.89
NEDD4-205ENST00000506154 PCDHB13Q9Y5F0 798 aa3.26□□□□□ -1.89
NEDD4-205ENST00000506154 TECPR2O15040 1411 aa3.26□□□□□ -1.89
NEDD4-205ENST00000506154 ZC3H15Q8WU90 426 aaKnown RBP3.26□□□□□ -1.89
NEDD4-205ENST00000506154 PPP1R1BQ9UD71 204 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-205ENST00000506154 CD109Q6YHK3 1445 aa3.26□□□□□ -1.89
NEDD4-205ENST00000506154 MTMR7Q9Y216 660 aa3.26□□□□□ -1.89
NEDD4-205ENST00000506154 DLC1Q96QB1 1528 aa3.26□□□□□ -1.89
NEDD4-205ENST00000506154 ADAMTS7Q9UKP4 1686 aa3.25□□□□□ -1.89
NEDD4-205ENST00000506154 LGR5O75473 907 aa3.25□□□□□ -1.89
NEDD4-205ENST00000506154 PRDM4Q9UKN5 801 aa3.25□□□□□ -1.89
NEDD4-205ENST00000506154 SAMD1Q6SPF0 538 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-205ENST00000506154 ANKRD30BQ9BXX2 1392 aa3.25□□□□□ -1.89
NEDD4-205ENST00000506154 ZNF316A6NFI3 1004 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-205ENST00000506154 CDCA8Q53HL2 280 aa3.25□□□□□ -1.89
NEDD4-205ENST00000506154 DIP2AQ14689 1571 aa3.24□□□□□ -1.89
NEDD4-205ENST00000506154 CICQ96RK0 1608 aaPredicted RBP3.24□□□□□ -1.89
NEDD4-205ENST00000506154 RAD21O60216 631 aa3.24□□□□□ -1.89
NEDD4-205ENST00000506154 CCNB3Q8WWL7 1395 aa3.24□□□□□ -1.89
NEDD4-205ENST00000506154 MYO5BQ9ULV0 1848 aa3.24□□□□□ -1.89
NEDD4-205ENST00000506154 PPP1R37O75864 691 aa3.24□□□□□ -1.89
NEDD4-205ENST00000506154 POM121Q96HA1 1249 aa3.24□□□□□ -1.89
NEDD4-205ENST00000506154 GTPBP6O43824 516 aaPredicted RBP3.24□□□□□ -1.89
NEDD4-205ENST00000506154 KCTD17Q8N5Z5 321 aa3.24□□□□□ -1.89
NEDD4-205ENST00000506154 CHADLQ6NUI6 762 aa3.23□□□□□ -1.89
NEDD4-205ENST00000506154 SCAPERQ9BY12 1400 aa3.23□□□□□ -1.89
NEDD4-205ENST00000506154 CENPJQ9HC77 1338 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-205ENST00000506154 NLRP1Q9C000 1473 aa3.23□□□□□ -1.89
NEDD4-205ENST00000506154 PDE4CQ08493 712 aa3.23□□□□□ -1.89
NEDD4-205ENST00000506154 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.23□□□□□ -1.89
NEDD4-205ENST00000506154 HS6ST3Q8IZP7 471 aa3.23□□□□□ -1.89
NEDD4-205ENST00000506154 TAF7LQ5H9L4 462 aa3.23□□□□□ -1.89
NEDD4-205ENST00000506154 GRXCR2A6NFK2 248 aa3.23□□□□□ -1.89
NEDD4-205ENST00000506154 MLLT3P42568 568 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-205ENST00000506154 TSC1Q92574 1164 aa3.23□□□□□ -1.89
NEDD4-205ENST00000506154 A2MP01023 1474 aa3.23□□□□□ -1.89
NEDD4-205ENST00000506154 MKRN3Q13064 507 aaKnown RBP3.23□□□□□ -1.89
NEDD4-205ENST00000506154 CSPP1Q1MSJ5 1256 aa3.23□□□□□ -1.89
NEDD4-205ENST00000506154 NPATQ14207 1427 aa3.22□□□□□ -1.89
NEDD4-205ENST00000506154 KIF1AQ12756 1690 aa3.22□□□□□ -1.89
NEDD4-205ENST00000506154 C9orf84Q5VXU9 1444 aa3.22□□□□□ -1.89
NEDD4-205ENST00000506154 RGPD1P0DJD0 1748 aa3.22□□□□□ -1.89
NEDD4-205ENST00000506154 TRPM3Q9HCF6 1732 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-205ENST00000506154 ZBTB7CA1YPR0 619 aa3.22□□□□□ -1.89
NEDD4-205ENST00000506154 DHX29Q7Z478 1369 aaKnown RBP3.22□□□□□ -1.89
NEDD4-205ENST00000506154 CDC42BPGQ6DT37 1551 aa3.21□□□□□ -1.89
NEDD4-205ENST00000506154 YEATS2Q9ULM3 1422 aa3.21□□□□□ -1.89
NEDD4-205ENST00000506154 VGFO15240 615 aaPredicted RBP3.21□□□□□ -1.89
NEDD4-205ENST00000506154 TTLL12Q14166 644 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-205ENST00000506154 CHD2O14647 1828 aaKnown RBP3.21□□□□□ -1.9
NEDD4-205ENST00000506154 ABCC6O95255 1503 aa3.21□□□□□ -1.9
NEDD4-205ENST00000506154 RALGAPBQ86X10 1494 aa3.21□□□□□ -1.9
NEDD4-205ENST00000506154 GZF1Q9H116 711 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-205ENST00000506154 SCAF11Q99590 1463 aaKnown RBP3.21□□□□□ -1.9
NEDD4-205ENST00000506154 PIK3C2GO75747 1445 aa3.21□□□□□ -1.9
NEDD4-205ENST00000506154 ZMYND15Q9H091 742 aa3.21□□□□□ -1.9
NEDD4-205ENST00000506154 KDM4CQ9H3R0 1056 aa3.21□□□□□ -1.9
NEDD4-205ENST00000506154 AKAP12Q02952 1782 aa3.21□□□□□ -1.9
NEDD4-205ENST00000506154 CNTLNQ9NXG0 1405 aa3.21□□□□□ -1.9
NEDD4-205ENST00000506154 GLI3P10071 1580 aa3.21□□□□□ -1.9
NEDD4-205ENST00000506154 ADGRL1O94910 1474 aa3.21□□□□□ -1.9
NEDD4-205ENST00000506154 MON2Q7Z3U7 1717 aa3.21□□□□□ -1.9
NEDD4-205ENST00000506154 ABCA3Q99758 1704 aa3.2□□□□□ -1.9
NEDD4-205ENST00000506154 RIOK3O14730 519 aaKnown RBP3.2□□□□□ -1.9
NEDD4-205ENST00000506154 NEFLP07196 543 aa3.2□□□□□ -1.9
NEDD4-205ENST00000506154 COL22A1Q8NFW1 1626 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-205ENST00000506154 NUTM2FA1L443 756 aa3.2□□□□□ -1.9
NEDD4-205ENST00000506154 UPF1Q92900 1129 aaKnown RBP eCLIP3.2□□□□□ -1.9
NEDD4-205ENST00000506154 DHX37Q8IY37 1157 aaKnown RBP3.2□□□□□ -1.9
NEDD4-205ENST00000506154 POLR3EQ9NVU0 708 aa3.2□□□□□ -1.9
NEDD4-205ENST00000506154 NCAPD2Q15021 1401 aa3.19□□□□□ -1.9
NEDD4-205ENST00000506154 RBM10P98175 930 aaKnown RBP3.19□□□□□ -1.9
NEDD4-205ENST00000506154 SBNO2Q9Y2G9 1366 aa3.19□□□□□ -1.9
NEDD4-205ENST00000506154 MED1Q15648 1581 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-205ENST00000506154 LTBP4Q8N2S1 1624 aa3.19□□□□□ -1.9
NEDD4-205ENST00000506154 RBM19Q9Y4C8 960 aaKnown RBP3.19□□□□□ -1.9
NEDD4-205ENST00000506154 CD163L1Q9NR16 1453 aa3.19□□□□□ -1.9
NEDD4-205ENST00000506154 IRX6P78412 446 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-205ENST00000506154 CABP2Q9NPB3 220 aa3.19□□□□□ -1.9
NEDD4-205ENST00000506154 LARP6Q9BRS8 491 aaKnown RBP3.19□□□□□ -1.9
NEDD4-205ENST00000506154 A2ML1A8K2U0 1454 aa3.19□□□□□ -1.9
NEDD4-205ENST00000506154 BRD2P25440 801 aaKnown RBP3.18□□□□□ -1.9
NEDD4-205ENST00000506154 GPIHBP1Q8IV16 184 aa3.18□□□□□ -1.9
NEDD4-205ENST00000506154 GAS2L2Q8NHY3 880 aa3.18□□□□□ -1.9
NEDD4-205ENST00000506154 FECHP22830 423 aa3.18□□□□□ -1.9
NEDD4-205ENST00000506154 RASEFQ8IZ41 740 aa3.18□□□□□ -1.9
NEDD4-205ENST00000506154 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-205ENST00000506154 SSH2Q76I76 1423 aa3.18□□□□□ -1.9
NEDD4-205ENST00000506154 SCNN1AP37088 669 aa3.18□□□□□ -1.9
NEDD4-205ENST00000506154 SETD5Q9C0A6 1442 aa3.18□□□□□ -1.9
NEDD4-205ENST00000506154 ZNF526Q8TF50 670 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-205ENST00000506154 ALS2Q96Q42 1657 aa3.18□□□□□ -1.9
NEDD4-205ENST00000506154 FMN2Q9NZ56 1722 aa3.18□□□□□ -1.9
NEDD4-205ENST00000506154 ARHGAP5Q13017 1502 aa3.18□□□□□ -1.9
NEDD4-205ENST00000506154 DEKP35659 375 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms