RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 PCDHGC3Q9UN70 934 aa8.45□□□□□ -1.06
LINC01088-202ENST00000505149 USB1Q9BQ65 265 aaKnown RBP8.44□□□□□ -1.06
LINC01088-202ENST00000505149 FAM117AQ9C073 453 aa8.44□□□□□ -1.06
LINC01088-202ENST00000505149 SPDYE5A6NIY4 337 aa8.43□□□□□ -1.06
LINC01088-202ENST00000505149 GUCA2AQ02747 115 aa8.43□□□□□ -1.06
LINC01088-202ENST00000505149 PRPF38BQ5VTL8 546 aaKnown RBP8.43□□□□□ -1.06
LINC01088-202ENST00000505149 RETREG3Q86VR2 466 aa8.43□□□□□ -1.06
LINC01088-202ENST00000505149 ANKLE1Q8NAG6 615 aa8.43□□□□□ -1.06
LINC01088-202ENST00000505149 GOPCQ9HD26 462 aa8.43□□□□□ -1.06
LINC01088-202ENST00000505149 PLEKHG3A1L390 1219 aa8.42□□□□□ -1.06
LINC01088-202ENST00000505149 RNF223E7ERA6 249 aa8.42□□□□□ -1.06
LINC01088-202ENST00000505149 S1PR4O95977 384 aa8.42□□□□□ -1.06
LINC01088-202ENST00000505149 PRKCSHP14314 528 aaPredicted RBP8.42□□□□□ -1.06
LINC01088-202ENST00000505149 NDUFV2P19404 249 aa8.42□□□□□ -1.06
LINC01088-202ENST00000505149 MMP16P51512 607 aa8.42□□□□□ -1.06
LINC01088-202ENST00000505149 NEUROD2Q15784 382 aa8.42□□□□□ -1.06
LINC01088-202ENST00000505149 SH3D19Q5HYK7 790 aa8.42□□□□□ -1.06
LINC01088-202ENST00000505149 RIC3Q7Z5B4 369 aa8.42□□□□□ -1.06
LINC01088-202ENST00000505149 DXOO77932 396 aaKnown RBP8.4□□□□□ -1.06
LINC01088-202ENST00000505149 SKIV2LQ15477 1246 aaKnown RBP8.4□□□□□ -1.06
LINC01088-202ENST00000505149 DESI1Q6ICB0 168 aa8.4□□□□□ -1.06
LINC01088-202ENST00000505149 MTMR2Q13614 643 aa8.39□□□□□ -1.07
LINC01088-202ENST00000505149 V9GY48 417 aaPredicted RBP8.39□□□□□ -1.07
LINC01088-202ENST00000505149 CLK2P49760 499 aaKnown RBP8.38□□□□□ -1.07
LINC01088-202ENST00000505149 ZBTB3Q9H5J0 574 aa8.38□□□□□ -1.07
LINC01088-202ENST00000505149 LIMD1Q9UGP4 676 aa8.38□□□□□ -1.07
LINC01088-202ENST00000505149 PCDHB15Q9Y5E8 787 aa8.38□□□□□ -1.07
LINC01088-202ENST00000505149 C6orf229H3BNL8 230 aa8.37□□□□□ -1.07
LINC01088-202ENST00000505149 LILRB3O75022 631 aa8.37□□□□□ -1.07
LINC01088-202ENST00000505149 JUNDP17535 347 aa8.36□□□□□ -1.07
LINC01088-202ENST00000505149 HRCP23327 699 aa8.36□□□□□ -1.07
LINC01088-202ENST00000505149 SYMPKQ92797 1274 aaKnown RBP8.36□□□□□ -1.07
LINC01088-202ENST00000505149 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.36□□□□□ -1.07
LINC01088-202ENST00000505149 PRDM9Q9NQV7 894 aa8.36□□□□□ -1.07
LINC01088-202ENST00000505149 EMID1Q96A84 441 aaPredicted RBP8.34□□□□□ -1.07
LINC01088-202ENST00000505149 PPEF1O14829 653 aaPredicted RBP8.33□□□□□ -1.08
LINC01088-202ENST00000505149 RPIAP49247 311 aa8.33□□□□□ -1.08
LINC01088-202ENST00000505149 PPP2R2DQ66LE6 453 aa8.33□□□□□ -1.08
LINC01088-202ENST00000505149 PRR7Q8TB68 274 aa8.33□□□□□ -1.08
LINC01088-202ENST00000505149 PRKD2Q9BZL6 878 aa8.33□□□□□ -1.08
LINC01088-202ENST00000505149 FCF1Q9Y324 198 aaKnown RBP8.33□□□□□ -1.08
LINC01088-202ENST00000505149 QPCTQ16769 361 aa8.32□□□□□ -1.08
LINC01088-202ENST00000505149 PTPRNQ16849 979 aa8.32□□□□□ -1.08
LINC01088-202ENST00000505149 PLA2G2CQ5R387 149 aa8.32□□□□□ -1.08
LINC01088-202ENST00000505149 POLR3EQ9NVU0 708 aa8.32□□□□□ -1.08
LINC01088-202ENST00000505149 CFAP99D6REC4 459 aa8.31□□□□□ -1.08
LINC01088-202ENST00000505149 SLC19A1P41440 591 aa8.31□□□□□ -1.08
LINC01088-202ENST00000505149 LYPD8Q6UX82 237 aa8.3□□□□□ -1.08
LINC01088-202ENST00000505149 IL27Q8NEV9 243 aa8.3□□□□□ -1.08
LINC01088-202ENST00000505149 CABLES1Q8TDN4 633 aa8.3□□□□□ -1.08
LINC01088-202ENST00000505149 SPRYD7Q5W111 196 aa8.29□□□□□ -1.08
LINC01088-202ENST00000505149 LIAT1Q6ZQX7 453 aa8.29□□□□□ -1.08
LINC01088-202ENST00000505149 CCNYL3P0C7X3 344 aa8.28□□□□□ -1.08
LINC01088-202ENST00000505149 ZNF598Q86UK7 904 aaKnown RBP8.28□□□□□ -1.08
LINC01088-202ENST00000505149 PROCA1Q8NCQ7 364 aaPredicted RBP8.28□□□□□ -1.08
LINC01088-202ENST00000505149 NUDT12Q9BQG2 462 aa8.28□□□□□ -1.08
LINC01088-202ENST00000505149 IRX2Q9BZI1 471 aaPredicted RBP8.28□□□□□ -1.08
LINC01088-202ENST00000505149 EVA1BQ9NVM1 165 aa8.28□□□□□ -1.08
LINC01088-202ENST00000505149 NUTM2BA6NNL0 878 aaPredicted RBP8.27□□□□□ -1.09
LINC01088-202ENST00000505149 NUTM2EB1AL46 878 aaPredicted RBP8.27□□□□□ -1.09
LINC01088-202ENST00000505149 CSPP1Q1MSJ5 1256 aa8.27□□□□□ -1.09
LINC01088-202ENST00000505149 RTL5Q5HYW3 569 aaPredicted RBP8.27□□□□□ -1.09
LINC01088-202ENST00000505149 NUTM2DQ5VT03 806 aaPredicted RBP8.27□□□□□ -1.09
LINC01088-202ENST00000505149 NUTM2AQ8IVF1 878 aaPredicted RBP8.27□□□□□ -1.09
LINC01088-202ENST00000505149 PCMTD1Q96MG8 357 aaPredicted RBP8.27□□□□□ -1.09
LINC01088-202ENST00000505149 HELBQ8NG08 1087 aaPredicted RBP8.26□□□□□ -1.09
LINC01088-202ENST00000505149 CD2BP2O95400 341 aaKnown RBP8.25□□□□□ -1.09
LINC01088-202ENST00000505149 F12P00748 615 aaPredicted RBP8.25□□□□□ -1.09
LINC01088-202ENST00000505149 FBXO31Q5XUX0 539 aaPredicted RBP8.25□□□□□ -1.09
LINC01088-202ENST00000505149 ZBTB24O43167 697 aaPredicted RBP8.24□□□□□ -1.09
LINC01088-202ENST00000505149 PRR20EP86478 221 aa8.24□□□□□ -1.09
LINC01088-202ENST00000505149 PRR20CP86479 221 aa8.24□□□□□ -1.09
LINC01088-202ENST00000505149 PRR20DP86480 221 aa8.24□□□□□ -1.09
LINC01088-202ENST00000505149 PRR20BP86481 221 aa8.24□□□□□ -1.09
LINC01088-202ENST00000505149 PRR20AP86496 221 aa8.24□□□□□ -1.09
LINC01088-202ENST00000505149 KCNH2Q12809 1159 aa8.24□□□□□ -1.09
LINC01088-202ENST00000505149 TRIM32Q13049 653 aa8.23□□□□□ -1.09
LINC01088-202ENST00000505149 WNT7BP56706 349 aa8.22□□□□□ -1.09
LINC01088-202ENST00000505149 LAPTM4AQ15012 233 aa8.22□□□□□ -1.09
LINC01088-202ENST00000505149 ZNF697Q5TEC3 545 aa8.22□□□□□ -1.09
LINC01088-202ENST00000505149 PER1O15534 1290 aaPredicted RBP8.21□□□□□ -1.1
LINC01088-202ENST00000505149 RFC5P40937 340 aa8.21□□□□□ -1.1
LINC01088-202ENST00000505149 TMEM259Q4ZIN3 620 aa8.21□□□□□ -1.1
LINC01088-202ENST00000505149 PTCRAQ6ISU1 281 aaPredicted RBP8.21□□□□□ -1.1
LINC01088-202ENST00000505149 CCDC24Q8N4L8 307 aa8.21□□□□□ -1.1
LINC01088-202ENST00000505149 LOC100996750A0A140TA64 210 aa8.2□□□□□ -1.1
LINC01088-202ENST00000505149 SOCS7O14512 581 aa8.2□□□□□ -1.1
LINC01088-202ENST00000505149 GDF9O60383 454 aa8.2□□□□□ -1.1
LINC01088-202ENST00000505149 TRIM67Q6ZTA4 783 aa8.2□□□□□ -1.1
LINC01088-202ENST00000505149 KRTAP4-6Q9BYQ5 205 aa8.2□□□□□ -1.1
LINC01088-202ENST00000505149 UNC93B1Q9H1C4 597 aa8.2□□□□□ -1.1
LINC01088-202ENST00000505149 CTDSPL2Q05D32 466 aa8.19□□□□□ -1.1
LINC01088-202ENST00000505149 WNT7AO00755 349 aa8.18□□□□□ -1.1
LINC01088-202ENST00000505149 PKD2L1Q9P0L9 805 aa8.18□□□□□ -1.1
LINC01088-202ENST00000505149 NRG2O14511 850 aaPredicted RBP8.17□□□□□ -1.1
LINC01088-202ENST00000505149 BANK1Q8NDB2 785 aa8.17□□□□□ -1.1
LINC01088-202ENST00000505149 ARMC2Q8NEN0 867 aa8.17□□□□□ -1.1
LINC01088-202ENST00000505149 SKOR1P84550 965 aa8.16□□□□□ -1.1
LINC01088-202ENST00000505149 TSC1Q92574 1164 aa8.16□□□□□ -1.1
LINC01088-202ENST00000505149 MAP10Q9P2G4 905 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms