RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 NLRP6P59044 892 aa9.47□□□□□ -0.89
CDH9-202ENST00000505020 RINLQ6ZS11 566 aa9.47□□□□□ -0.89
CDH9-202ENST00000505020 PHF8Q9UPP1 1060 aa9.47□□□□□ -0.89
CDH9-202ENST00000505020 LMOD1P29536 600 aaPredicted RBP9.46□□□□□ -0.9
CDH9-202ENST00000505020 FAM193AP78312 1265 aa9.46□□□□□ -0.9
CDH9-202ENST00000505020 MAMSTRQ6ZN01 415 aa9.45□□□□□ -0.9
CDH9-202ENST00000505020 TSHZ1Q6ZSZ6 1077 aa9.45□□□□□ -0.9
CDH9-202ENST00000505020 CUEDC1Q9NWM3 386 aaPredicted RBP9.45□□□□□ -0.9
CDH9-202ENST00000505020 KIF4AO95239 1232 aa9.45□□□□□ -0.9
CDH9-202ENST00000505020 IBSPP21815 317 aaPredicted RBP9.45□□□□□ -0.9
CDH9-202ENST00000505020 HIC1Q14526 733 aa9.45□□□□□ -0.9
CDH9-202ENST00000505020 WDR78Q5VTH9 848 aa9.45□□□□□ -0.9
CDH9-202ENST00000505020 BEGAINQ9BUH8 593 aa9.45□□□□□ -0.9
CDH9-202ENST00000505020 PDIA6Q15084 440 aa9.44□□□□□ -0.9
CDH9-202ENST00000505020 C4orf46Q504U0 113 aa9.44□□□□□ -0.9
CDH9-202ENST00000505020 TANGO6Q9C0B7 1094 aa9.44□□□□□ -0.9
CDH9-202ENST00000505020 SSTR3P32745 418 aaPredicted RBP9.43□□□□□ -0.9
CDH9-202ENST00000505020 MARSP56192 900 aaKnown RBP9.43□□□□□ -0.9
CDH9-202ENST00000505020 EVX2Q03828 476 aa9.43□□□□□ -0.9
CDH9-202ENST00000505020 CCDC144BQ3MJ40 725 aa9.43□□□□□ -0.9
CDH9-202ENST00000505020 NOP58Q9Y2X3 529 aaKnown RBP9.43□□□□□ -0.9
CDH9-202ENST00000505020 TBX22Q9Y458 520 aa9.43□□□□□ -0.9
CDH9-202ENST00000505020 PALM3A6NDB9 673 aaPredicted RBP9.42□□□□□ -0.9
CDH9-202ENST00000505020 GRXCR2A6NFK2 248 aa9.42□□□□□ -0.9
CDH9-202ENST00000505020 SPDYE16A6NNV3 312 aaPredicted RBP9.42□□□□□ -0.9
CDH9-202ENST00000505020 EXOC5O00471 708 aa9.42□□□□□ -0.9
CDH9-202ENST00000505020 ATG7O95352 703 aa9.42□□□□□ -0.9
CDH9-202ENST00000505020 TMEM259Q4ZIN3 620 aa9.42□□□□□ -0.9
CDH9-202ENST00000505020 FTSJ3Q8IY81 847 aaKnown RBP9.42□□□□□ -0.9
CDH9-202ENST00000505020 NLGN1Q8N2Q7 840 aa9.42□□□□□ -0.9
CDH9-202ENST00000505020 TAGLNQ01995 201 aaKnown RBP9.42□□□□□ -0.9
CDH9-202ENST00000505020 MYSM1Q5VVJ2 828 aa9.42□□□□□ -0.9
CDH9-202ENST00000505020 B4GALNT3Q6L9W6 998 aa9.42□□□□□ -0.9
CDH9-202ENST00000505020 CCDC146Q8IYE0 955 aa9.42□□□□□ -0.9
CDH9-202ENST00000505020 TMUB1Q9BVT8 246 aa9.42□□□□□ -0.9
CDH9-202ENST00000505020 PHF14O94880 888 aa9.41□□□□□ -0.9
CDH9-202ENST00000505020 LIG1P18858 919 aa9.41□□□□□ -0.9
CDH9-202ENST00000505020 EFCAB3Q8N7B9 438 aa9.41□□□□□ -0.9
CDH9-202ENST00000505020 GNL3LQ9NVN8 582 aaKnown RBP9.41□□□□□ -0.9
CDH9-202ENST00000505020 ANKRD33BA6NCL7 494 aa9.4□□□□□ -0.9
CDH9-202ENST00000505020 SOX12O15370 315 aa9.4□□□□□ -0.9
CDH9-202ENST00000505020 WDHD1O75717 1129 aaPredicted RBP9.4□□□□□ -0.9
CDH9-202ENST00000505020 MNX1P50219 401 aaPredicted RBP9.4□□□□□ -0.9
CDH9-202ENST00000505020 TSNAXIP1Q2TAA8 658 aa9.4□□□□□ -0.9
CDH9-202ENST00000505020 DHX38Q92620 1227 aaKnown RBP9.4□□□□□ -0.9
CDH9-202ENST00000505020 EMILIN3Q9NT22 766 aa9.4□□□□□ -0.9
CDH9-202ENST00000505020 PCDHB8Q9UN66 801 aa9.4□□□□□ -0.9
CDH9-202ENST00000505020 PCDHB13Q9Y5F0 798 aa9.4□□□□□ -0.9
CDH9-202ENST00000505020 FCHSD2O94868 740 aa9.4□□□□□ -0.91
CDH9-202ENST00000505020 C7P10643 843 aa9.4□□□□□ -0.91
CDH9-202ENST00000505020 CLK2P49760 499 aaKnown RBP9.4□□□□□ -0.91
CDH9-202ENST00000505020 C11orf96Q7Z7L8 435 aa9.4□□□□□ -0.91
CDH9-202ENST00000505020 COMMD10Q9Y6G5 202 aa9.4□□□□□ -0.91
CDH9-202ENST00000505020 MDM2Q00987 491 aaPredicted RBP9.39□□□□□ -0.91
CDH9-202ENST00000505020 TCEAL1Q15170 157 aa9.39□□□□□ -0.91
CDH9-202ENST00000505020 PIF1Q9H611 641 aa9.39□□□□□ -0.91
CDH9-202ENST00000505020 PSEN1P49768 467 aa9.38□□□□□ -0.91
CDH9-202ENST00000505020 GLIPR1L2Q4G1C9 344 aa9.38□□□□□ -0.91
CDH9-202ENST00000505020 SDR16C5Q8N3Y7 309 aa9.38□□□□□ -0.91
CDH9-202ENST00000505020 PNISRQ8TF01 805 aaKnown RBP9.38□□□□□ -0.91
CDH9-202ENST00000505020 PIK3R5Q8WYR1 880 aa9.38□□□□□ -0.91
CDH9-202ENST00000505020 PRM3Q9NNZ6 103 aa9.38□□□□□ -0.91
CDH9-202ENST00000505020 POTEMA6NI47 508 aa9.38□□□□□ -0.91
CDH9-202ENST00000505020 CLCN1P35523 988 aa9.38□□□□□ -0.91
CDH9-202ENST00000505020 PHLDB3Q6NSJ2 640 aa9.38□□□□□ -0.91
CDH9-202ENST00000505020 CCAR1Q8IX12 1150 aaKnown RBP9.38□□□□□ -0.91
CDH9-202ENST00000505020 ANP32CO43423 234 aa9.37□□□□□ -0.91
CDH9-202ENST00000505020 FXR2P51116 673 aaKnown RBP eCLIP9.37□□□□□ -0.91
CDH9-202ENST00000505020 RHBDL3P58872 404 aa9.37□□□□□ -0.91
CDH9-202ENST00000505020 C9orf131Q5VYM1 1079 aa9.37□□□□□ -0.91
CDH9-202ENST00000505020 CACTIN-AS1Q8N1I8 211 aa9.37□□□□□ -0.91
CDH9-202ENST00000505020 BRINP2Q9C0B6 783 aa9.37□□□□□ -0.91
CDH9-202ENST00000505020 GPCPD1Q9NPB8 672 aa9.37□□□□□ -0.91
CDH9-202ENST00000505020 TFIP11Q9UBB9 837 aaKnown RBP9.37□□□□□ -0.91
CDH9-202ENST00000505020 HOXA2O43364 376 aa9.36□□□□□ -0.91
CDH9-202ENST00000505020 PLEKHG6Q3KR16 790 aa9.36□□□□□ -0.91
CDH9-202ENST00000505020 SOWAHDA6NJG2 315 aa9.35□□□□□ -0.91
CDH9-202ENST00000505020 BDNFP23560 247 aa9.35□□□□□ -0.91
CDH9-202ENST00000505020 DEKP35659 375 aaKnown RBP9.35□□□□□ -0.91
CDH9-202ENST00000505020 GYS2P54840 703 aa9.35□□□□□ -0.91
CDH9-202ENST00000505020 PPP1R15BQ5SWA1 713 aa9.35□□□□□ -0.91
CDH9-202ENST00000505020 G3BP2Q9UN86 482 aaKnown RBP9.35□□□□□ -0.91
CDH9-202ENST00000505020 BIRC2Q13490 618 aa9.35□□□□□ -0.91
CDH9-202ENST00000505020 AMOTL1Q8IY63 956 aa9.35□□□□□ -0.91
CDH9-202ENST00000505020 CCDC85AQ96PX6 553 aaPredicted RBP9.35□□□□□ -0.91
CDH9-202ENST00000505020 JADE2Q9NQC1 790 aa9.35□□□□□ -0.91
CDH9-202ENST00000505020 CALRP27797 417 aaKnown RBP9.34□□□□□ -0.91
CDH9-202ENST00000505020 TBX4P57082 545 aa9.34□□□□□ -0.91
CDH9-202ENST00000505020 PPP4CP60510 307 aa9.34□□□□□ -0.91
CDH9-202ENST00000505020 REM2Q8IYK8 340 aaPredicted RBP9.34□□□□□ -0.91
CDH9-202ENST00000505020 ZCRB1Q8TBF4 217 aaKnown RBP9.34□□□□□ -0.91
CDH9-202ENST00000505020 RPS6KC1Q96S38 1066 aa9.34□□□□□ -0.91
CDH9-202ENST00000505020 IRF2BPLQ9H1B7 796 aa9.34□□□□□ -0.91
CDH9-202ENST00000505020 PRKAG2Q9UGJ0 569 aa9.34□□□□□ -0.91
CDH9-202ENST00000505020 WWC3Q9ULE0 1092 aa9.34□□□□□ -0.91
CDH9-202ENST00000505020 PRR12Q9ULL5 1215 aa9.34□□□□□ -0.91
CDH9-202ENST00000505020 IQSEC3Q9UPP2 1182 aaPredicted RBP9.33□□□□□ -0.92
CDH9-202ENST00000505020 COL4A3BPQ9Y5P4 624 aa9.33□□□□□ -0.92
CDH9-202ENST00000505020 EPB41L2O43491 1005 aaKnown RBP9.33□□□□□ -0.92
CDH9-202ENST00000505020 ZNF500O60304 480 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms