RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 PTCH1Q13635 1447 aa19.75■□□□□ 0.75
DDX41-204ENST00000504807 SF3B2Q13435 895 aaKnown RBP19.73■□□□□ 0.75
DDX41-204ENST00000504807 GJD4Q96KN9 370 aaPredicted RBP19.73■□□□□ 0.75
DDX41-204ENST00000504807 NALCNQ8IZF0 1738 aa19.73■□□□□ 0.75
DDX41-204ENST00000504807 MPHOSPH9Q99550 1183 aa19.72■□□□□ 0.75
DDX41-204ENST00000504807 SPATA31E1Q6ZUB1 1445 aa19.71■□□□□ 0.75
DDX41-204ENST00000504807 BCL9LQ86UU0 1499 aa19.71■□□□□ 0.75
DDX41-204ENST00000504807 HRCP23327 699 aa19.7■□□□□ 0.74
DDX41-204ENST00000504807 SOS2Q07890 1332 aaPredicted RBP19.7■□□□□ 0.74
DDX41-204ENST00000504807 ADGRL3Q9HAR2 1447 aa19.69■□□□□ 0.74
DDX41-204ENST00000504807 ROBO2Q9HCK4 1378 aa19.69■□□□□ 0.74
DDX41-204ENST00000504807 IFT172Q9UG01 1749 aa19.68■□□□□ 0.74
DDX41-204ENST00000504807 C1orf167Q5SNV9 1468 aa19.68■□□□□ 0.74
DDX41-204ENST00000504807 ORAI2Q96SN7 254 aa19.68■□□□□ 0.74
DDX41-204ENST00000504807 ADGRF5Q8IZF2 1346 aa19.68■□□□□ 0.74
DDX41-204ENST00000504807 CCDC144AA2RUR9 1427 aa19.66■□□□□ 0.74
DDX41-204ENST00000504807 VGFO15240 615 aaPredicted RBP19.65■□□□□ 0.74
DDX41-204ENST00000504807 YY1P25490 414 aa19.65■□□□□ 0.74
DDX41-204ENST00000504807 RPGRIP1LQ68CZ1 1315 aa19.65■□□□□ 0.74
DDX41-204ENST00000504807 RAB3GAP2Q9H2M9 1393 aa19.64■□□□□ 0.73
DDX41-204ENST00000504807 PRAG1Q86YV5 1406 aa19.64■□□□□ 0.73
DDX41-204ENST00000504807 RGL3Q3MIN7 710 aa19.63■□□□□ 0.73
DDX41-204ENST00000504807 MYOM2P54296 1465 aa19.62■□□□□ 0.73
DDX41-204ENST00000504807 RALGAPBQ86X10 1494 aa19.61■□□□□ 0.73
DDX41-204ENST00000504807 UNC5CLQ8IV45 518 aa19.59■□□□□ 0.73
DDX41-204ENST00000504807 SEPT12Q8IYM1 358 aa19.59■□□□□ 0.73
DDX41-204ENST00000504807 LAMC1P11047 1609 aa19.58■□□□□ 0.73
DDX41-204ENST00000504807 PIK3C2GO75747 1445 aa19.58■□□□□ 0.72
DDX41-204ENST00000504807 COL22A1Q8NFW1 1626 aaPredicted RBP19.58■□□□□ 0.72
DDX41-204ENST00000504807 GLI3P10071 1580 aa19.57■□□□□ 0.72
DDX41-204ENST00000504807 BAG6P46379 1132 aa19.56■□□□□ 0.72
DDX41-204ENST00000504807 XPCQ01831 940 aaPredicted RBP19.56■□□□□ 0.72
DDX41-204ENST00000504807 R3HDM1Q15032 1099 aaKnown RBP19.55■□□□□ 0.72
DDX41-204ENST00000504807 TMEM132EQ6IEE7 984 aa19.55■□□□□ 0.72
DDX41-204ENST00000504807 PLEKHH1Q9ULM0 1364 aa19.55■□□□□ 0.72
DDX41-204ENST00000504807 ANKRD30BQ9BXX2 1392 aa19.54■□□□□ 0.72
DDX41-204ENST00000504807 NRXN1Q9ULB1 1477 aa19.54■□□□□ 0.72
DDX41-204ENST00000504807 TECPR2O15040 1411 aa19.52■□□□□ 0.72
DDX41-204ENST00000504807 KRT27Q7Z3Y8 459 aa19.52■□□□□ 0.72
DDX41-204ENST00000504807 WAPLQ7Z5K2 1190 aa19.52■□□□□ 0.72
DDX41-204ENST00000504807 STK26Q9P289 416 aa19.52■□□□□ 0.72
DDX41-204ENST00000504807 NPHP3Q7Z494 1330 aa19.51■□□□□ 0.71
DDX41-204ENST00000504807 BRWD3Q6RI45 1802 aa19.51■□□□□ 0.71
DDX41-204ENST00000504807 ESCO1Q5FWF5 840 aa19.51■□□□□ 0.71
DDX41-204ENST00000504807 LRPPRCP42704 1394 aaKnown RBP19.51■□□□□ 0.71
DDX41-204ENST00000504807 KNDC1Q76NI1 1749 aa19.51■□□□□ 0.71
DDX41-204ENST00000504807 SLIT2O94813 1529 aa19.51■□□□□ 0.71
DDX41-204ENST00000504807 CDC42BPGQ6DT37 1551 aa19.5■□□□□ 0.71
DDX41-204ENST00000504807 EN1Q05925 392 aaPredicted RBP19.5■□□□□ 0.71
DDX41-204ENST00000504807 FOXO3O43524 673 aa19.49■□□□□ 0.71
DDX41-204ENST00000504807 CCDC9Q9Y3X0 531 aaKnown RBP19.49■□□□□ 0.71
DDX41-204ENST00000504807 YTHDC2Q9H6S0 1430 aaKnown RBP19.48■□□□□ 0.71
DDX41-204ENST00000504807 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.48■□□□□ 0.71
DDX41-204ENST00000504807 MARF1Q9Y4F3 1742 aaKnown RBP19.48■□□□□ 0.71
DDX41-204ENST00000504807 PXDNQ92626 1479 aa19.48■□□□□ 0.71
DDX41-204ENST00000504807 A0A0G2JS52 829 aa19.47■□□□□ 0.71
DDX41-204ENST00000504807 MYT1Q01538 1121 aa19.47■□□□□ 0.71
DDX41-204ENST00000504807 CFAP70Q5T0N1 1121 aa19.47■□□□□ 0.71
DDX41-204ENST00000504807 ABCC11Q96J66 1382 aa19.46■□□□□ 0.71
DDX41-204ENST00000504807 VPS72Q15906 364 aa19.45■□□□□ 0.7
DDX41-204ENST00000504807 C14orf93Q9H972 538 aaKnown RBP19.45■□□□□ 0.7
DDX41-204ENST00000504807 NUTM2FA1L443 756 aa19.43■□□□□ 0.7
DDX41-204ENST00000504807 ONECUT3O60422 494 aaPredicted RBP19.43■□□□□ 0.7
DDX41-204ENST00000504807 ADGRB1O14514 1584 aa19.43■□□□□ 0.7
DDX41-204ENST00000504807 PLEKHG5O94827 1062 aa19.42■□□□□ 0.7
DDX41-204ENST00000504807 FMN2Q9NZ56 1722 aa19.42■□□□□ 0.7
DDX41-204ENST00000504807 IFFO2Q5TF58 517 aa19.41■□□□□ 0.7
DDX41-204ENST00000504807 HAP1P54257 671 aaPredicted RBP19.4■□□□□ 0.7
DDX41-204ENST00000504807 FAM182BQ5T319 152 aa19.4■□□□□ 0.7
DDX41-204ENST00000504807 DHX57Q6P158 1386 aaKnown RBP19.4■□□□□ 0.7
DDX41-204ENST00000504807 ACIN1Q9UKV3 1341 aaKnown RBP19.39■□□□□ 0.69
DDX41-204ENST00000504807 EZH2Q15910 746 aaKnown RBP19.38■□□□□ 0.69
DDX41-204ENST00000504807 FAM98CQ17RN3 349 aaKnown RBP19.37■□□□□ 0.69
DDX41-204ENST00000504807 SPATA31A3Q5VYP0 1347 aa19.36■□□□□ 0.69
DDX41-204ENST00000504807 CABLES1Q8TDN4 633 aa19.36■□□□□ 0.69
DDX41-204ENST00000504807 USP32Q8NFA0 1604 aa19.36■□□□□ 0.69
DDX41-204ENST00000504807 RGPD8O14715 1765 aaPredicted RBP19.35■□□□□ 0.69
DDX41-204ENST00000504807 SENP3-EIF4A1A0A087X0R7 540 aa19.35■□□□□ 0.69
DDX41-204ENST00000504807 DCAF8L1A6NGE4 600 aa19.35■□□□□ 0.69
DDX41-204ENST00000504807 SAFB2Q14151 953 aaKnown RBP eCLIP19.34■□□□□ 0.69
DDX41-204ENST00000504807 SIRT1Q96EB6 747 aa19.34■□□□□ 0.69
DDX41-204ENST00000504807 PRAM1Q96QH2 718 aa19.34■□□□□ 0.69
DDX41-204ENST00000504807 KDM2AQ9Y2K7 1162 aa19.34■□□□□ 0.69
DDX41-204ENST00000504807 DLC1Q96QB1 1528 aa19.34■□□□□ 0.69
DDX41-204ENST00000504807 DCAF11Q8TEB1 546 aa19.33■□□□□ 0.68
DDX41-204ENST00000504807 PPP1R1BQ9UD71 204 aaPredicted RBP19.32■□□□□ 0.68
DDX41-204ENST00000504807 KRT28Q7Z3Y7 464 aa19.3■□□□□ 0.68
DDX41-204ENST00000504807 DISP2A7MBM2 1401 aa19.3■□□□□ 0.68
DDX41-204ENST00000504807 ADGRB2O60241 1585 aa19.3■□□□□ 0.68
DDX41-204ENST00000504807 CAMKK2Q96RR4 588 aa19.29■□□□□ 0.68
DDX41-204ENST00000504807 TRAK1Q9UPV9 953 aa19.29■□□□□ 0.68
DDX41-204ENST00000504807 RGPD1P0DJD0 1748 aa19.28■□□□□ 0.68
DDX41-204ENST00000504807 KIF1AQ12756 1690 aa19.28■□□□□ 0.68
DDX41-204ENST00000504807 FAM83GA6ND36 823 aa19.28■□□□□ 0.68
DDX41-204ENST00000504807 PLCH1Q4KWH8 1693 aa19.27■□□□□ 0.68
DDX41-204ENST00000504807 LMOD2Q6P5Q4 547 aa19.27■□□□□ 0.68
DDX41-204ENST00000504807 ZNF784Q8NCA9 323 aaPredicted RBP19.27■□□□□ 0.68
DDX41-204ENST00000504807 HIRIP3Q9BW71 556 aaPredicted RBP19.27■□□□□ 0.68
DDX41-204ENST00000504807 PRR36Q9H6K5 1346 aa19.25■□□□□ 0.67
DDX41-204ENST00000504807 TRIM37O94972 964 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 292.6 ms