RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 ADGRB2O60241 1585 aa14.31□□□□□ -0.12
USP17L28-201ENST00000504543 NBPF8Q3BBV2 869 aa14.31□□□□□ -0.12
USP17L28-201ENST00000504543 ARHGEF28Q8N1W1 1705 aaKnown RBP14.31□□□□□ -0.12
USP17L28-201ENST00000504543 SLAIN2Q9P270 581 aa14.31□□□□□ -0.12
USP17L28-201ENST00000504543 NBPF1Q3BBV0 1214 aa14.3□□□□□ -0.12
USP17L28-201ENST00000504543 MST1RQ04912 1400 aa14.29□□□□□ -0.12
USP17L28-201ENST00000504543 EIF4G2P78344 907 aaKnown RBP eCLIP14.29□□□□□ -0.12
USP17L28-201ENST00000504543 WAPLQ7Z5K2 1190 aa14.29□□□□□ -0.12
USP17L28-201ENST00000504543 ILDR1Q86SU0 546 aaPredicted RBP14.29□□□□□ -0.12
USP17L28-201ENST00000504543 RBM33Q96EV2 1170 aaKnown RBP14.29□□□□□ -0.12
USP17L28-201ENST00000504543 PRAM1Q96QH2 718 aa14.29□□□□□ -0.12
USP17L28-201ENST00000504543 ROCK2O75116 1388 aaKnown RBP14.28□□□□□ -0.12
USP17L28-201ENST00000504543 PLEKHH1Q9ULM0 1364 aa14.28□□□□□ -0.12
USP17L28-201ENST00000504543 POGKQ9P215 609 aa14.28□□□□□ -0.12
USP17L28-201ENST00000504543 TRAK1Q9UPV9 953 aa14.28□□□□□ -0.12
USP17L28-201ENST00000504543 EIF3AQ14152 1382 aaKnown RBP14.27□□□□□ -0.13
USP17L28-201ENST00000504543 MIER1Q8N108 512 aa14.26□□□□□ -0.13
USP17L28-201ENST00000504543 FMN2Q9NZ56 1722 aa14.26□□□□□ -0.13
USP17L28-201ENST00000504543 HSPA5P11021 654 aaKnown RBP14.26□□□□□ -0.13
USP17L28-201ENST00000504543 SBNO2Q9Y2G9 1366 aa14.25□□□□□ -0.13
USP17L28-201ENST00000504543 C1orf167Q5SNV9 1468 aa14.25□□□□□ -0.13
USP17L28-201ENST00000504543 ANKARQ7Z5J8 1434 aa14.25□□□□□ -0.13
USP17L28-201ENST00000504543 ROBO1Q9Y6N7 1651 aa14.25□□□□□ -0.13
USP17L28-201ENST00000504543 CENPJQ9HC77 1338 aaPredicted RBP14.24□□□□□ -0.13
USP17L28-201ENST00000504543 SLC24A1O60721 1099 aa14.24□□□□□ -0.13
USP17L28-201ENST00000504543 AHDC1Q5TGY3 1603 aaPredicted RBP14.23□□□□□ -0.13
USP17L28-201ENST00000504543 USP47Q96K76 1375 aa14.22□□□□□ -0.13
USP17L28-201ENST00000504543 PIP4K2BP78356 416 aa14.22□□□□□ -0.13
USP17L28-201ENST00000504543 WASLO00401 505 aaPredicted RBP14.22□□□□□ -0.13
USP17L28-201ENST00000504543 BRINP3Q76B58 766 aa14.22□□□□□ -0.13
USP17L28-201ENST00000504543 CARD11Q9BXL7 1154 aa14.22□□□□□ -0.13
USP17L28-201ENST00000504543 TULP4Q9NRJ4 1543 aa14.21□□□□□ -0.14
USP17L28-201ENST00000504543 NHSL1Q5SYE7 1610 aa14.2□□□□□ -0.14
USP17L28-201ENST00000504543 KIF1AQ12756 1690 aa14.2□□□□□ -0.14
USP17L28-201ENST00000504543 QRICH2Q9H0J4 1663 aa14.2□□□□□ -0.14
USP17L28-201ENST00000504543 HIRIP3Q9BW71 556 aaPredicted RBP14.19□□□□□ -0.14
USP17L28-201ENST00000504543 CCDC7Q96M83 1385 aa14.19□□□□□ -0.14
USP17L28-201ENST00000504543 WASHC2AQ641Q2 1341 aa14.19□□□□□ -0.14
USP17L28-201ENST00000504543 SCAF1Q9H7N4 1312 aaKnown RBP14.19□□□□□ -0.14
USP17L28-201ENST00000504543 PUS7Q96PZ0 661 aaKnown RBP14.18□□□□□ -0.14
USP17L28-201ENST00000504543 MINK1Q8N4C8 1332 aaPredicted RBP14.18□□□□□ -0.14
USP17L28-201ENST00000504543 HSPA1LP34931 641 aa14.17□□□□□ -0.14
USP17L28-201ENST00000504543 DDX10Q13206 875 aaKnown RBP14.17□□□□□ -0.14
USP17L28-201ENST00000504543 USP32Q8NFA0 1604 aa14.17□□□□□ -0.14
USP17L28-201ENST00000504543 SAFB2Q14151 953 aaKnown RBP eCLIP14.17□□□□□ -0.14
USP17L28-201ENST00000504543 ITSN1Q15811 1721 aa14.16□□□□□ -0.14
USP17L28-201ENST00000504543 COL16A1Q07092 1604 aaPredicted RBP14.16□□□□□ -0.14
USP17L28-201ENST00000504543 PHLPP1O60346 1717 aa14.16□□□□□ -0.14
USP17L28-201ENST00000504543 SOS2Q07890 1332 aaPredicted RBP14.15□□□□□ -0.14
USP17L28-201ENST00000504543 NPHP3Q7Z494 1330 aa14.15□□□□□ -0.14
USP17L28-201ENST00000504543 EVC2Q86UK5 1308 aa14.15□□□□□ -0.14
USP17L28-201ENST00000504543 ATP7BP35670 1465 aa14.15□□□□□ -0.14
USP17L28-201ENST00000504543 ORAI2Q96SN7 254 aa14.14□□□□□ -0.15
USP17L28-201ENST00000504543 CDK19Q9BWU1 502 aa14.14□□□□□ -0.15
USP17L28-201ENST00000504543 RGPD8O14715 1765 aaPredicted RBP14.14□□□□□ -0.15
USP17L28-201ENST00000504543 ESCO1Q5FWF5 840 aa14.13□□□□□ -0.15
USP17L28-201ENST00000504543 PHF8Q9UPP1 1060 aa14.13□□□□□ -0.15
USP17L28-201ENST00000504543 CCDC61Q9Y6R9 512 aa14.13□□□□□ -0.15
USP17L28-201ENST00000504543 PRR36Q9H6K5 1346 aa14.13□□□□□ -0.15
USP17L28-201ENST00000504543 TOPAZ1Q8N9V7 1692 aa14.13□□□□□ -0.15
USP17L28-201ENST00000504543 PLEKHG3A1L390 1219 aa14.13□□□□□ -0.15
USP17L28-201ENST00000504543 LRRC59Q96AG4 307 aaKnown RBP14.13□□□□□ -0.15
USP17L28-201ENST00000504543 NUDT16Q96DE0 195 aaKnown RBP14.12□□□□□ -0.15
USP17L28-201ENST00000504543 TESK2Q96S53 571 aa14.12□□□□□ -0.15
USP17L28-201ENST00000504543 KIF7Q2M1P5 1343 aa14.12□□□□□ -0.15
USP17L28-201ENST00000504543 BRD4O60885 1362 aaPredicted RBP14.11□□□□□ -0.15
USP17L28-201ENST00000504543 ATAD2Q6PL18 1390 aa14.11□□□□□ -0.15
USP17L28-201ENST00000504543 JCADQ9P266 1359 aa14.11□□□□□ -0.15
USP17L28-201ENST00000504543 CENPBP07199 599 aaPredicted RBP14.11□□□□□ -0.15
USP17L28-201ENST00000504543 PXDNQ92626 1479 aa14.11□□□□□ -0.15
USP17L28-201ENST00000504543 SHPRHQ149N8 1683 aa14.1□□□□□ -0.15
USP17L28-201ENST00000504543 ST20-MTHFSA0A0A6YYL1 179 aa14.1□□□□□ -0.15
USP17L28-201ENST00000504543 SBNO1A3KN83 1393 aa14.1□□□□□ -0.15
USP17L28-201ENST00000504543 POLR3AO14802 1390 aaPredicted RBP14.1□□□□□ -0.15
USP17L28-201ENST00000504543 CCER2I3L3R5 266 aa14.09□□□□□ -0.15
USP17L28-201ENST00000504543 ANP32CO43423 234 aa14.09□□□□□ -0.15
USP17L28-201ENST00000504543 PSME1Q06323 249 aa14.09□□□□□ -0.15
USP17L28-201ENST00000504543 SPATA31A6Q5VVP1 1343 aa14.08□□□□□ -0.15
USP17L28-201ENST00000504543 NUTM2FA1L443 756 aa14.08□□□□□ -0.16
USP17L28-201ENST00000504543 C11orf95C9JLR9 678 aaPredicted RBP14.08□□□□□ -0.16
USP17L28-201ENST00000504543 FOXO3O43524 673 aa14.08□□□□□ -0.16
USP17L28-201ENST00000504543 SRPK2P78362 688 aaKnown RBP14.08□□□□□ -0.16
USP17L28-201ENST00000504543 CDCA8Q53HL2 280 aa14.07□□□□□ -0.16
USP17L28-201ENST00000504543 NINLQ9Y2I6 1382 aa14.07□□□□□ -0.16
USP17L28-201ENST00000504543 COL22A1Q8NFW1 1626 aaPredicted RBP14.06□□□□□ -0.16
USP17L28-201ENST00000504543 TMF1P82094 1093 aa14.05□□□□□ -0.16
USP17L28-201ENST00000504543 KRT28Q7Z3Y7 464 aa14.05□□□□□ -0.16
USP17L28-201ENST00000504543 CABP2Q9NPB3 220 aa14.05□□□□□ -0.16
USP17L28-201ENST00000504543 PPIP5K1Q6PFW1 1433 aa14.05□□□□□ -0.16
USP17L28-201ENST00000504543 ZNF692Q9BU19 519 aaPredicted RBP14.05□□□□□ -0.16
USP17L28-201ENST00000504543 SPATA31A3Q5VYP0 1347 aa14.04□□□□□ -0.16
USP17L28-201ENST00000504543 PNPLA6Q8IY17 1366 aa14.04□□□□□ -0.16
USP17L28-201ENST00000504543 TRPM3Q9HCF6 1732 aaPredicted RBP14.04□□□□□ -0.16
USP17L28-201ENST00000504543 TNS3Q68CZ2 1445 aa14.04□□□□□ -0.16
USP17L28-201ENST00000504543 NGDNQ8NEJ9 315 aaKnown RBP14.04□□□□□ -0.16
USP17L28-201ENST00000504543 ARHGEF10O15013 1369 aa14.03□□□□□ -0.16
USP17L28-201ENST00000504543 ACEP12821 1306 aa14.03□□□□□ -0.16
USP17L28-201ENST00000504543 PMFBP1Q8TBY8 1022 aa14.03□□□□□ -0.16
USP17L28-201ENST00000504543 CPSF1Q10570 1443 aaKnown RBP14.02□□□□□ -0.16
USP17L28-201ENST00000504543 DDX17Q92841 729 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms