RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 YTHDC2Q9H6S0 1430 aaKnown RBP12.07□□□□□ -0.48
LINC02239-201ENST00000504339 EVC2Q86UK5 1308 aa12.07□□□□□ -0.48
LINC02239-201ENST00000504339 ZNF521Q96K83 1311 aa12.07□□□□□ -0.48
LINC02239-201ENST00000504339 ZMYM3Q14202 1370 aa12.07□□□□□ -0.48
LINC02239-201ENST00000504339 PRAM1Q96QH2 718 aa12.06□□□□□ -0.48
LINC02239-201ENST00000504339 ANP32EQ9BTT0 268 aa12.06□□□□□ -0.48
LINC02239-201ENST00000504339 WDR43Q15061 677 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC02239-201ENST00000504339 RCAN3Q9UKA8 241 aa12.05□□□□□ -0.48
LINC02239-201ENST00000504339 ANKRD36BQ8N2N9 1353 aa12.05□□□□□ -0.48
LINC02239-201ENST00000504339 RIMS2Q9UQ26 1411 aa12.04□□□□□ -0.48
LINC02239-201ENST00000504339 STAG3Q9UJ98 1225 aa12.04□□□□□ -0.48
LINC02239-201ENST00000504339 CCDC146Q8IYE0 955 aa12.04□□□□□ -0.48
LINC02239-201ENST00000504339 MINK1Q8N4C8 1332 aaPredicted RBP12.04□□□□□ -0.48
LINC02239-201ENST00000504339 POLR3AO14802 1390 aaPredicted RBP12.04□□□□□ -0.48
LINC02239-201ENST00000504339 RRP1P56182 461 aaKnown RBP12.03□□□□□ -0.48
LINC02239-201ENST00000504339 TNNT2P45379 298 aaPredicted RBP12.03□□□□□ -0.48
LINC02239-201ENST00000504339 MORC1Q86VD1 984 aa12.03□□□□□ -0.48
LINC02239-201ENST00000504339 USP32Q8NFA0 1604 aa12.03□□□□□ -0.48
LINC02239-201ENST00000504339 CD163L1Q9NR16 1453 aa12.02□□□□□ -0.48
LINC02239-201ENST00000504339 A0A1W2PP64 1363 aa12.02□□□□□ -0.49
LINC02239-201ENST00000504339 SETD1AO15047 1707 aaKnown RBP12.02□□□□□ -0.49
LINC02239-201ENST00000504339 DUSP27Q5VZP5 1158 aa12.02□□□□□ -0.49
LINC02239-201ENST00000504339 APAF1O14727 1248 aa12.01□□□□□ -0.49
LINC02239-201ENST00000504339 WAPLQ7Z5K2 1190 aa12.01□□□□□ -0.49
LINC02239-201ENST00000504339 SPINK5Q9NQ38 1064 aaPredicted RBP12.01□□□□□ -0.49
LINC02239-201ENST00000504339 CGNL1Q0VF96 1302 aa12.01□□□□□ -0.49
LINC02239-201ENST00000504339 NRXN3Q9Y4C0 1643 aa12.01□□□□□ -0.49
LINC02239-201ENST00000504339 METP08581 1390 aa12□□□□□ -0.49
LINC02239-201ENST00000504339 RBM19Q9Y4C8 960 aaKnown RBP12□□□□□ -0.49
LINC02239-201ENST00000504339 SRPK2P78362 688 aaKnown RBP12□□□□□ -0.49
LINC02239-201ENST00000504339 POGKQ9P215 609 aa12□□□□□ -0.49
LINC02239-201ENST00000504339 DMRT2Q9Y5R5 561 aa12□□□□□ -0.49
LINC02239-201ENST00000504339 TRMT2AQ8IZ69 625 aaKnown RBP11.99□□□□□ -0.49
LINC02239-201ENST00000504339 NLRP1Q9C000 1473 aa11.99□□□□□ -0.49
LINC02239-201ENST00000504339 ABCC11Q96J66 1382 aa11.99□□□□□ -0.49
LINC02239-201ENST00000504339 MTHFSP49914 203 aa11.99□□□□□ -0.49
LINC02239-201ENST00000504339 CDK19Q9BWU1 502 aa11.99□□□□□ -0.49
LINC02239-201ENST00000504339 SHPRHQ149N8 1683 aa11.99□□□□□ -0.49
LINC02239-201ENST00000504339 PLIN1O60240 522 aa11.98□□□□□ -0.49
LINC02239-201ENST00000504339 EXOC6Q8TAG9 804 aa11.98□□□□□ -0.49
LINC02239-201ENST00000504339 TNRQ92752 1358 aa11.98□□□□□ -0.49
LINC02239-201ENST00000504339 SLFN5Q08AF3 891 aa11.98□□□□□ -0.49
LINC02239-201ENST00000504339 DLC1Q96QB1 1528 aa11.98□□□□□ -0.49
LINC02239-201ENST00000504339 ATAD2Q6PL18 1390 aa11.97□□□□□ -0.49
LINC02239-201ENST00000504339 NINLQ9Y2I6 1382 aa11.97□□□□□ -0.49
LINC02239-201ENST00000504339 FYB1O15117 783 aa11.97□□□□□ -0.49
LINC02239-201ENST00000504339 GOLGA2Q08379 1002 aa11.97□□□□□ -0.49
LINC02239-201ENST00000504339 CABP1Q9NZU7 370 aa11.97□□□□□ -0.49
LINC02239-201ENST00000504339 NSD2O96028 1365 aa11.96□□□□□ -0.49
LINC02239-201ENST00000504339 CEBPAP49715 358 aaPredicted RBP11.96□□□□□ -0.49
LINC02239-201ENST00000504339 GGNBP2Q9H3C7 697 aa11.96□□□□□ -0.49
LINC02239-201ENST00000504339 ESF1Q9H501 851 aaKnown RBP11.96□□□□□ -0.49
LINC02239-201ENST00000504339 TMEM2Q9UHN6 1383 aa11.95□□□□□ -0.5
LINC02239-201ENST00000504339 C20orf194Q5TEA3 1177 aa11.94□□□□□ -0.5
LINC02239-201ENST00000504339 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.94□□□□□ -0.5
LINC02239-201ENST00000504339 LTKP29376 864 aa11.94□□□□□ -0.5
LINC02239-201ENST00000504339 TXNDC2Q86VQ3 553 aa11.94□□□□□ -0.5
LINC02239-201ENST00000504339 CCDC136Q96JN2 1154 aa11.94□□□□□ -0.5
LINC02239-201ENST00000504339 IQSEC2Q5JU85 1478 aa11.93□□□□□ -0.5
LINC02239-201ENST00000504339 WWC1Q8IX03 1113 aa11.93□□□□□ -0.5
LINC02239-201ENST00000504339 TERF2IPQ9NYB0 399 aa11.93□□□□□ -0.5
LINC02239-201ENST00000504339 UBR1Q8IWV7 1749 aa11.93□□□□□ -0.5
LINC02239-201ENST00000504339 ADAMTS13Q76LX8 1427 aa11.92□□□□□ -0.5
LINC02239-201ENST00000504339 TECPR2O15040 1411 aa11.92□□□□□ -0.5
LINC02239-201ENST00000504339 MED14O60244 1454 aa11.92□□□□□ -0.5
LINC02239-201ENST00000504339 NCKAP5LQ9HCH0 1330 aa11.91□□□□□ -0.5
LINC02239-201ENST00000504339 COL3A1P02461 1466 aaPredicted RBP11.91□□□□□ -0.5
LINC02239-201ENST00000504339 WASLO00401 505 aaPredicted RBP11.91□□□□□ -0.5
LINC02239-201ENST00000504339 TCP11L2Q8N4U5 519 aa11.91□□□□□ -0.5
LINC02239-201ENST00000504339 RUNDC1Q96C34 613 aa11.91□□□□□ -0.5
LINC02239-201ENST00000504339 RRP7AQ9Y3A4 280 aaKnown RBP11.91□□□□□ -0.5
LINC02239-201ENST00000504339 SIRT1Q96EB6 747 aa11.9□□□□□ -0.5
LINC02239-201ENST00000504339 CRBNQ96SW2 442 aa11.9□□□□□ -0.5
LINC02239-201ENST00000504339 FBLN1P23142 703 aa11.9□□□□□ -0.5
LINC02239-201ENST00000504339 ROBO2Q9HCK4 1378 aa11.9□□□□□ -0.51
LINC02239-201ENST00000504339 CPSF1Q10570 1443 aaKnown RBP11.89□□□□□ -0.51
LINC02239-201ENST00000504339 FAM135BQ49AJ0 1406 aa11.89□□□□□ -0.51
LINC02239-201ENST00000504339 E9PSI1 815 aa11.89□□□□□ -0.51
LINC02239-201ENST00000504339 NGEFQ8N5V2 710 aa11.89□□□□□ -0.51
LINC02239-201ENST00000504339 HDGFL2Q7Z4V5 671 aaPredicted RBP11.89□□□□□ -0.51
LINC02239-201ENST00000504339 CFAP53Q96M91 514 aa11.88□□□□□ -0.51
LINC02239-201ENST00000504339 PLEKHF1Q96S99 279 aa11.88□□□□□ -0.51
LINC02239-201ENST00000504339 PNPLA6Q8IY17 1366 aa11.88□□□□□ -0.51
LINC02239-201ENST00000504339 NKTRP30414 1462 aaKnown RBP11.88□□□□□ -0.51
LINC02239-201ENST00000504339 ATP7BP35670 1465 aa11.88□□□□□ -0.51
LINC02239-201ENST00000504339 HDGFP51858 240 aaKnown RBP11.88□□□□□ -0.51
LINC02239-201ENST00000504339 NEUROD2Q15784 382 aa11.88□□□□□ -0.51
LINC02239-201ENST00000504339 PRR36Q9H6K5 1346 aa11.88□□□□□ -0.51
LINC02239-201ENST00000504339 CPS1P31327 1500 aa11.87□□□□□ -0.51
LINC02239-201ENST00000504339 BCAR3O75815 825 aa11.87□□□□□ -0.51
LINC02239-201ENST00000504339 U2AF1L5P0DN76 240 aaPredicted RBP11.87□□□□□ -0.51
LINC02239-201ENST00000504339 U2AF1Q01081 240 aaKnown RBP eCLIP11.87□□□□□ -0.51
LINC02239-201ENST00000504339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.87□□□□□ -0.51
LINC02239-201ENST00000504339 PLEKHG1Q9ULL1 1385 aa11.87□□□□□ -0.51
LINC02239-201ENST00000504339 PTPRUQ92729 1446 aa11.87□□□□□ -0.51
LINC02239-201ENST00000504339 NUDT16Q96DE0 195 aaKnown RBP11.86□□□□□ -0.51
LINC02239-201ENST00000504339 PPIP5K1Q6PFW1 1433 aa11.86□□□□□ -0.51
LINC02239-201ENST00000504339 KNDC1Q76NI1 1749 aa11.86□□□□□ -0.51
LINC02239-201ENST00000504339 ANKRD26Q9UPS8 1709 aa11.86□□□□□ -0.51
LINC02239-201ENST00000504339 ZRANB1Q9UGI0 708 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms