RNA–Protein interactions for RNA: ENST00000504233.5

PAPD4-207, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 1 (best) BASIC

Gene PAPD4, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-207ENST00000504233 KDM2BQ8NHM5 1336 aa14.67□□□□□ -0.06
PAPD4-207ENST00000504233 CABP2Q9NPB3 220 aa14.66□□□□□ -0.06
PAPD4-207ENST00000504233 NRXN1Q9ULB1 1477 aa14.66□□□□□ -0.06
PAPD4-207ENST00000504233 E9PSI1 815 aa14.66□□□□□ -0.06
PAPD4-207ENST00000504233 TRMT2AQ8IZ69 625 aaKnown RBP14.66□□□□□ -0.06
PAPD4-207ENST00000504233 AEBP2Q6ZN18 517 aaPredicted RBP14.65□□□□□ -0.06
PAPD4-207ENST00000504233 NKTRP30414 1462 aaKnown RBP14.65□□□□□ -0.06
PAPD4-207ENST00000504233 MTHFSP49914 203 aa14.65□□□□□ -0.06
PAPD4-207ENST00000504233 WWC1Q8IX03 1113 aa14.65□□□□□ -0.06
PAPD4-207ENST00000504233 CANXP27824 592 aaKnown RBP14.64□□□□□ -0.07
PAPD4-207ENST00000504233 CENPQQ7L2Z9 268 aaPredicted RBP14.64□□□□□ -0.07
PAPD4-207ENST00000504233 LMTK2Q8IWU2 1503 aa14.64□□□□□ -0.07
PAPD4-207ENST00000504233 FRAT1Q92837 279 aaPredicted RBP14.64□□□□□ -0.07
PAPD4-207ENST00000504233 NEURL4Q96JN8 1562 aa14.64□□□□□ -0.07
PAPD4-207ENST00000504233 PANK1Q8TE04 598 aa14.63□□□□□ -0.07
PAPD4-207ENST00000504233 BCL2L13Q9BXK5 485 aa14.63□□□□□ -0.07
PAPD4-207ENST00000504233 SBNO2Q9Y2G9 1366 aa14.63□□□□□ -0.07
PAPD4-207ENST00000504233 QRICH2Q9H0J4 1663 aa14.62□□□□□ -0.07
PAPD4-207ENST00000504233 TCP11L2Q8N4U5 519 aa14.62□□□□□ -0.07
PAPD4-207ENST00000504233 HECW2Q9P2P5 1572 aa14.62□□□□□ -0.07
PAPD4-207ENST00000504233 ABCC3O15438 1527 aa14.62□□□□□ -0.07
PAPD4-207ENST00000504233 IDI1Q13907 227 aa14.62□□□□□ -0.07
PAPD4-207ENST00000504233 COG6Q9Y2V7 657 aa14.62□□□□□ -0.07
PAPD4-207ENST00000504233 MLH3Q9UHC1 1453 aa14.61□□□□□ -0.07
PAPD4-207ENST00000504233 PPLO60437 1756 aa14.61□□□□□ -0.07
PAPD4-207ENST00000504233 ADGRB1O14514 1584 aa14.61□□□□□ -0.07
PAPD4-207ENST00000504233 POLR3AO14802 1390 aaPredicted RBP14.61□□□□□ -0.07
PAPD4-207ENST00000504233 PKNOX2Q96KN3 472 aa14.61□□□□□ -0.07
PAPD4-207ENST00000504233 VSIG10Q8N0Z9 540 aa14.6□□□□□ -0.07
PAPD4-207ENST00000504233 MYO3AQ8NEV4 1616 aa14.6□□□□□ -0.07
PAPD4-207ENST00000504233 CGNL1Q0VF96 1302 aa14.6□□□□□ -0.07
PAPD4-207ENST00000504233 TNNQ9UQP3 1299 aa14.6□□□□□ -0.07
PAPD4-207ENST00000504233 VGFO15240 615 aaPredicted RBP14.59□□□□□ -0.07
PAPD4-207ENST00000504233 IGHDP01880 384 aa14.59□□□□□ -0.07
PAPD4-207ENST00000504233 U2AF1L5P0DN76 240 aaPredicted RBP14.59□□□□□ -0.07
PAPD4-207ENST00000504233 SRPK2P78362 688 aaKnown RBP14.59□□□□□ -0.07
PAPD4-207ENST00000504233 U2AF1Q01081 240 aaKnown RBP eCLIP14.59□□□□□ -0.076e-7■□□□□ 11
PAPD4-207ENST00000504233 EVC2Q86UK5 1308 aa14.59□□□□□ -0.07
PAPD4-207ENST00000504233 SIGLEC1Q9BZZ2 1709 aa14.59□□□□□ -0.07
PAPD4-207ENST00000504233 SETBP1Q9Y6X0 1596 aa14.59□□□□□ -0.07
PAPD4-207ENST00000504233 RUNDC1Q96C34 613 aa14.59□□□□□ -0.07
PAPD4-207ENST00000504233 MINK1Q8N4C8 1332 aaPredicted RBP14.58□□□□□ -0.08
PAPD4-207ENST00000504233 GGNBP2Q9H3C7 697 aa14.58□□□□□ -0.08
PAPD4-207ENST00000504233 RPGRIP1LQ68CZ1 1315 aa14.58□□□□□ -0.08
PAPD4-207ENST00000504233 KCNA4P22459 653 aa14.58□□□□□ -0.08
PAPD4-207ENST00000504233 CLUAP1Q96AJ1 413 aa14.57□□□□□ -0.08
PAPD4-207ENST00000504233 YEATS2Q9ULM3 1422 aa14.57□□□□□ -0.08
PAPD4-207ENST00000504233 CFAP53Q96M91 514 aa14.57□□□□□ -0.08
PAPD4-207ENST00000504233 GLI2P10070 1586 aa14.56□□□□□ -0.08
PAPD4-207ENST00000504233 C8orf34Q49A92 452 aa14.56□□□□□ -0.08
PAPD4-207ENST00000504233 FBXO31Q5XUX0 539 aaPredicted RBP14.56□□□□□ -0.08
PAPD4-207ENST00000504233 U2SURPO15042 1029 aaKnown RBP14.56□□□□□ -0.08
PAPD4-207ENST00000504233 CAMSAP1Q5T5Y3 1602 aa14.56□□□□□ -0.08
PAPD4-207ENST00000504233 FAM161AQ3B820 660 aa14.55□□□□□ -0.08
PAPD4-207ENST00000504233 ZC3H13Q5T200 1668 aaKnown RBP14.55□□□□□ -0.08
PAPD4-207ENST00000504233 TULP4Q9NRJ4 1543 aa14.55□□□□□ -0.08
PAPD4-207ENST00000504233 SHPRHQ149N8 1683 aa14.55□□□□□ -0.08
PAPD4-207ENST00000504233 CFAP74Q9C0B2 1584 aa14.55□□□□□ -0.08
PAPD4-207ENST00000504233 GSE1Q14687 1217 aa14.54□□□□□ -0.08
PAPD4-207ENST00000504233 RARSP54136 660 aaKnown RBP14.54□□□□□ -0.08
PAPD4-207ENST00000504233 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
PAPD4-207ENST00000504233 RLBP1P12271 317 aa14.53□□□□□ -0.08
PAPD4-207ENST00000504233 NFKBIBQ15653 356 aa14.53□□□□□ -0.08
PAPD4-207ENST00000504233 CYB5RLQ6IPT4 315 aa14.53□□□□□ -0.08
PAPD4-207ENST00000504233 PRAM1Q96QH2 718 aa14.53□□□□□ -0.08
PAPD4-207ENST00000504233 NEXMIFQ5QGS0 1516 aa14.53□□□□□ -0.08
PAPD4-207ENST00000504233 POGKQ9P215 609 aa14.53□□□□□ -0.08
PAPD4-207ENST00000504233 ANKRD36BQ8N2N9 1353 aa14.53□□□□□ -0.08
PAPD4-207ENST00000504233 FRAT2O75474 233 aaPredicted RBP14.52□□□□□ -0.08
PAPD4-207ENST00000504233 TSR2Q969E8 191 aaKnown RBP14.52□□□□□ -0.08
PAPD4-207ENST00000504233 DIP2CQ9Y2E4 1556 aa14.52□□□□□ -0.08
PAPD4-207ENST00000504233 A0A1W2PP64 1363 aa14.52□□□□□ -0.09
PAPD4-207ENST00000504233 NGEFQ8N5V2 710 aa14.52□□□□□ -0.09
PAPD4-207ENST00000504233 PDE3AQ14432 1141 aa14.51□□□□□ -0.09
PAPD4-207ENST00000504233 STAG3Q9UJ98 1225 aa14.51□□□□□ -0.09
PAPD4-207ENST00000504233 ARHGEF28Q8N1W1 1705 aaKnown RBP14.51□□□□□ -0.09
PAPD4-207ENST00000504233 DDRGK1Q96HY6 314 aa14.51□□□□□ -0.09
PAPD4-207ENST00000504233 FBLN1P23142 703 aa14.5□□□□□ -0.09
PAPD4-207ENST00000504233 IQSEC2Q5JU85 1478 aa14.49□□□□□ -0.09
PAPD4-207ENST00000504233 NEO1Q92859 1461 aa14.49□□□□□ -0.09
PAPD4-207ENST00000504233 MYO5BQ9ULV0 1848 aa14.49□□□□□ -0.09
PAPD4-207ENST00000504233 MLECQ14165 292 aa14.49□□□□□ -0.09
PAPD4-207ENST00000504233 PCDHB15Q9Y5E8 787 aa14.49□□□□□ -0.09
PAPD4-207ENST00000504233 PIK3C2BO00750 1634 aa14.48□□□□□ -0.09
PAPD4-207ENST00000504233 PPM1GO15355 546 aaPredicted RBP14.48□□□□□ -0.09
PAPD4-207ENST00000504233 WDR63Q8IWG1 891 aa14.48□□□□□ -0.09
PAPD4-207ENST00000504233 SPRYD3Q8NCJ5 442 aa14.48□□□□□ -0.09
PAPD4-207ENST00000504233 ARID3AQ99856 593 aa14.48□□□□□ -0.09
PAPD4-207ENST00000504233 SLC52A1Q9NWF4 448 aa14.48□□□□□ -0.09
PAPD4-207ENST00000504233 PHF23Q9BUL5 403 aaPredicted RBP14.48□□□□□ -0.09
PAPD4-207ENST00000504233 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.47□□□□□ -0.095e-9■□□□□ 9.8
PAPD4-207ENST00000504233 FYB1O15117 783 aa14.46□□□□□ -0.09
PAPD4-207ENST00000504233 SEC24BO95487 1268 aa14.46□□□□□ -0.09
PAPD4-207ENST00000504233 NAP1L5Q96NT1 182 aaPredicted RBP14.46□□□□□ -0.09
PAPD4-207ENST00000504233 MYH16Q9H6N6 1097 aa14.46□□□□□ -0.1
PAPD4-207ENST00000504233 CABP1Q9NZU7 370 aa14.46□□□□□ -0.1
PAPD4-207ENST00000504233 WAPLQ7Z5K2 1190 aa14.45□□□□□ -0.1
PAPD4-207ENST00000504233 EXOSC9Q06265 439 aaKnown RBP14.45□□□□□ -0.1
PAPD4-207ENST00000504233 FAM69CQ0P6D2 419 aa14.45□□□□□ -0.1
PAPD4-207ENST00000504233 CDK19Q9BWU1 502 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms