RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-233ENST00000504203 APAF1O14727 1248 aa17.17■□□□□ 0.34
MATR3-233ENST00000504203 SHPRHQ149N8 1683 aa17.17■□□□□ 0.34
MATR3-233ENST00000504203 NGEFQ8N5V2 710 aa17.17■□□□□ 0.34
MATR3-233ENST00000504203 MORC1Q86VD1 984 aa17.16■□□□□ 0.34
MATR3-233ENST00000504203 ANKRD36BQ8N2N9 1353 aa17.16■□□□□ 0.34
MATR3-233ENST00000504203 AGLP35573 1532 aa17.16■□□□□ 0.34
MATR3-233ENST00000504203 CRBNQ96SW2 442 aa17.15■□□□□ 0.34
MATR3-233ENST00000504203 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
MATR3-233ENST00000504203 CGNL1Q0VF96 1302 aa17.14■□□□□ 0.33
MATR3-233ENST00000504203 FBXO31Q5XUX0 539 aaPredicted RBP17.13■□□□□ 0.33
MATR3-233ENST00000504203 PTPRMP28827 1452 aa17.13■□□□□ 0.33
MATR3-233ENST00000504203 C20orf194Q5TEA3 1177 aa17.13■□□□□ 0.33
MATR3-233ENST00000504203 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
MATR3-233ENST00000504203 TSPOAP1O95153 1857 aa17.12■□□□□ 0.33
MATR3-233ENST00000504203 NSD2O96028 1365 aa17.12■□□□□ 0.33
MATR3-233ENST00000504203 NKTRP30414 1462 aaKnown RBP17.11■□□□□ 0.33
MATR3-233ENST00000504203 CABP2Q9NPB3 220 aa17.11■□□□□ 0.33
MATR3-233ENST00000504203 E9PSI1 815 aa17.11■□□□□ 0.33
MATR3-233ENST00000504203 NINLQ9Y2I6 1382 aa17.1■□□□□ 0.33
MATR3-233ENST00000504203 YTHDC2Q9H6S0 1430 aaKnown RBP17.09■□□□□ 0.33
MATR3-233ENST00000504203 TCERG1O14776 1098 aaKnown RBP17.09■□□□□ 0.33
MATR3-233ENST00000504203 TNNT2P45379 298 aaPredicted RBP17.09■□□□□ 0.33
MATR3-233ENST00000504203 STK26Q9P289 416 aa17.09■□□□□ 0.33
MATR3-233ENST00000504203 DMRT2Q9Y5R5 561 aa17.09■□□□□ 0.33
MATR3-233ENST00000504203 CLTCQ00610 1675 aaKnown RBP17.09■□□□□ 0.33
MATR3-233ENST00000504203 ALKQ9UM73 1620 aa17.09■□□□□ 0.33
MATR3-233ENST00000504203 IQSEC2Q5JU85 1478 aa17.08■□□□□ 0.32
MATR3-233ENST00000504203 MTHFSP49914 203 aa17.08■□□□□ 0.32
MATR3-233ENST00000504203 SAFB2Q14151 953 aaKnown RBP eCLIP17.08■□□□□ 0.32
MATR3-233ENST00000504203 ABCC11Q96J66 1382 aa17.07■□□□□ 0.32
MATR3-233ENST00000504203 WWC1Q8IX03 1113 aa17.07■□□□□ 0.32
MATR3-233ENST00000504203 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.07■□□□□ 0.32
MATR3-233ENST00000504203 A0A1W2PP64 1363 aa17.07■□□□□ 0.32
MATR3-233ENST00000504203 SPATA31D1Q6ZQQ2 1576 aa17.07■□□□□ 0.32
MATR3-233ENST00000504203 RUNDC1Q96C34 613 aa17.06■□□□□ 0.32
MATR3-233ENST00000504203 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
MATR3-233ENST00000504203 ATAD2Q6PL18 1390 aa17.05■□□□□ 0.32
MATR3-233ENST00000504203 MS4A1P11836 297 aa17.05■□□□□ 0.32
MATR3-233ENST00000504203 PRAM1Q96QH2 718 aa17.05■□□□□ 0.32
MATR3-233ENST00000504203 A2ML1A8K2U0 1454 aa17.04■□□□□ 0.32
MATR3-233ENST00000504203 KDM2BQ8NHM5 1336 aa17.04■□□□□ 0.32
MATR3-233ENST00000504203 CFAP53Q96M91 514 aa17.04■□□□□ 0.32
MATR3-233ENST00000504203 CD163L1Q9NR16 1453 aa17.04■□□□□ 0.32
MATR3-233ENST00000504203 SRPK2P78362 688 aaKnown RBP17.04■□□□□ 0.32
MATR3-233ENST00000504203 SENP3Q9H4L4 574 aaPredicted RBP17.04■□□□□ 0.32
MATR3-233ENST00000504203 ARHGEF40Q8TER5 1519 aa17.02■□□□□ 0.32
MATR3-233ENST00000504203 MINK1Q8N4C8 1332 aaPredicted RBP17.02■□□□□ 0.32
MATR3-233ENST00000504203 TCP11L2Q8N4U5 519 aa17.02■□□□□ 0.32
MATR3-233ENST00000504203 NCBP3Q53F19 620 aaKnown RBP17.01■□□□□ 0.31
MATR3-233ENST00000504203 POGKQ9P215 609 aa17.01■□□□□ 0.31
MATR3-233ENST00000504203 STAG3Q9UJ98 1225 aa17.01■□□□□ 0.31
MATR3-233ENST00000504203 MED14O60244 1454 aa17.01■□□□□ 0.31
MATR3-233ENST00000504203 NLRP1Q9C000 1473 aa17.01■□□□□ 0.31
MATR3-233ENST00000504203 DLC1Q96QB1 1528 aa17.01■□□□□ 0.31
MATR3-233ENST00000504203 BCAR3O75815 825 aa17.01■□□□□ 0.31
MATR3-233ENST00000504203 SETD1AO15047 1707 aaKnown RBP17.01■□□□□ 0.31
MATR3-233ENST00000504203 ANKRD26Q9UPS8 1709 aa17.01■□□□□ 0.31
MATR3-233ENST00000504203 CCDC27Q2M243 656 aa17■□□□□ 0.31
MATR3-233ENST00000504203 PDE4AP27815 886 aa16.99■□□□□ 0.31
MATR3-233ENST00000504203 WDR63Q8IWG1 891 aa16.99■□□□□ 0.31
MATR3-233ENST00000504203 BACH2Q9BYV9 841 aa16.99■□□□□ 0.31
MATR3-233ENST00000504203 TERF2IPQ9NYB0 399 aa16.99■□□□□ 0.31
MATR3-233ENST00000504203 RIMS2Q9UQ26 1411 aa16.99■□□□□ 0.31
MATR3-233ENST00000504203 ERICH6Q7L0X2 663 aa16.98■□□□□ 0.31
MATR3-233ENST00000504203 CENPQQ7L2Z9 268 aaPredicted RBP16.98■□□□□ 0.31
MATR3-233ENST00000504203 ADGRB2O60241 1585 aa16.98■□□□□ 0.31
MATR3-233ENST00000504203 COL3A1P02461 1466 aaPredicted RBP16.98■□□□□ 0.31
MATR3-233ENST00000504203 FYB1O15117 783 aa16.98■□□□□ 0.31
MATR3-233ENST00000504203 RRP7AQ9Y3A4 280 aaKnown RBP16.98■□□□□ 0.31
MATR3-233ENST00000504203 KIF13AQ9H1H9 1805 aa16.97■□□□□ 0.31
MATR3-233ENST00000504203 ANP32AP39687 249 aaKnown RBP16.97■□□□□ 0.31
MATR3-233ENST00000504203 CDK19Q9BWU1 502 aa16.97■□□□□ 0.31
MATR3-233ENST00000504203 NEUROD2Q15784 382 aa16.97■□□□□ 0.31
MATR3-233ENST00000504203 GGNBP2Q9H3C7 697 aa16.97■□□□□ 0.31
MATR3-233ENST00000504203 IPO9Q96P70 1041 aaKnown RBP16.96■□□□□ 0.31
MATR3-233ENST00000504203 NOP58Q9Y2X3 529 aaKnown RBP16.96■□□□□ 0.3
MATR3-233ENST00000504203 U2AF1L5P0DN76 240 aaPredicted RBP16.95■□□□□ 0.3
MATR3-233ENST00000504203 U2AF1Q01081 240 aaKnown RBP eCLIP16.95■□□□□ 0.3
MATR3-233ENST00000504203 PDE3AQ14432 1141 aa16.95■□□□□ 0.3
MATR3-233ENST00000504203 SKAP1Q86WV1 359 aa16.95■□□□□ 0.3
MATR3-233ENST00000504203 NRXN3Q9Y4C0 1643 aa16.94■□□□□ 0.3
MATR3-233ENST00000504203 MLECQ14165 292 aa16.94■□□□□ 0.3
MATR3-233ENST00000504203 HDGFL2Q7Z4V5 671 aaPredicted RBP16.93■□□□□ 0.3
MATR3-233ENST00000504203 CABP1Q9NZU7 370 aa16.93■□□□□ 0.3
MATR3-233ENST00000504203 PLEKHF1Q96S99 279 aa16.92■□□□□ 0.3
MATR3-233ENST00000504203 PNPLA6Q8IY17 1366 aa16.92■□□□□ 0.3
MATR3-233ENST00000504203 KIF20BQ96Q89 1820 aa16.92■□□□□ 0.3
MATR3-233ENST00000504203 PAK3O75914 559 aaPredicted RBP16.92■□□□□ 0.3
MATR3-233ENST00000504203 RARSP54136 660 aaKnown RBP16.92■□□□□ 0.3
MATR3-233ENST00000504203 WAPLQ7Z5K2 1190 aa16.92■□□□□ 0.3
MATR3-233ENST00000504203 ZMYM3Q14202 1370 aa16.91■□□□□ 0.3
MATR3-233ENST00000504203 ATP7BP35670 1465 aa16.91■□□□□ 0.3
MATR3-233ENST00000504203 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.89■□□□□ 0.29
MATR3-233ENST00000504203 METP08581 1390 aa16.88■□□□□ 0.29
MATR3-233ENST00000504203 MYH16Q9H6N6 1097 aa16.88■□□□□ 0.29
MATR3-233ENST00000504203 U2SURPO15042 1029 aaKnown RBP16.86■□□□□ 0.29
MATR3-233ENST00000504203 TMPOP42166 694 aaKnown RBP16.86■□□□□ 0.29
MATR3-233ENST00000504203 PANK1Q8TE04 598 aa16.86■□□□□ 0.29
MATR3-233ENST00000504203 KNDC1Q76NI1 1749 aa16.86■□□□□ 0.29
MATR3-233ENST00000504203 TECPR2O15040 1411 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms