RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 POLR3GLQ9BT43 218 aa20.87■□□□□ 0.93
SGCA-204ENST00000504073 QRICH2Q9H0J4 1663 aa20.86■□□□□ 0.93
SGCA-204ENST00000504073 METP08581 1390 aa20.86■□□□□ 0.93
SGCA-204ENST00000504073 KIF7Q2M1P5 1343 aa20.86■□□□□ 0.93
SGCA-204ENST00000504073 WASHC2AQ641Q2 1341 aa20.86■□□□□ 0.93
SGCA-204ENST00000504073 TECPR2O15040 1411 aa20.86■□□□□ 0.93
SGCA-204ENST00000504073 FAM135BQ49AJ0 1406 aa20.86■□□□□ 0.93
SGCA-204ENST00000504073 EVC2Q86UK5 1308 aa20.84■□□□□ 0.93
SGCA-204ENST00000504073 DDX10Q13206 875 aaKnown RBP20.84■□□□□ 0.93
SGCA-204ENST00000504073 PRAM1Q96QH2 718 aa20.84■□□□□ 0.93
SGCA-204ENST00000504073 PUS7Q96PZ0 661 aaKnown RBP20.81■□□□□ 0.92
SGCA-204ENST00000504073 AMOTL2Q9Y2J4 779 aa20.81■□□□□ 0.92
SGCA-204ENST00000504073 PTCH1Q13635 1447 aa20.79■□□□□ 0.92
SGCA-204ENST00000504073 RGS17Q9UGC6 210 aaPredicted RBP20.79■□□□□ 0.92
SGCA-204ENST00000504073 C11orf95C9JLR9 678 aaPredicted RBP20.78■□□□□ 0.92
SGCA-204ENST00000504073 SAFB2Q14151 953 aaKnown RBP eCLIP20.77■□□□□ 0.92
SGCA-204ENST00000504073 MINK1Q8N4C8 1332 aaPredicted RBP20.75■□□□□ 0.91
SGCA-204ENST00000504073 CHD2O14647 1828 aaKnown RBP20.74■□□□□ 0.91
SGCA-204ENST00000504073 XRN1Q8IZH2 1706 aaKnown RBP20.74■□□□□ 0.91
SGCA-204ENST00000504073 ATAD2Q6PL18 1390 aa20.73■□□□□ 0.91
SGCA-204ENST00000504073 KCNA6P17658 529 aa20.73■□□□□ 0.91
SGCA-204ENST00000504073 SRPK2P78362 688 aaKnown RBP20.73■□□□□ 0.91
SGCA-204ENST00000504073 NINLQ9Y2I6 1382 aa20.72■□□□□ 0.91
SGCA-204ENST00000504073 PTPRUQ92729 1446 aa20.72■□□□□ 0.91
SGCA-204ENST00000504073 WAPLQ7Z5K2 1190 aa20.72■□□□□ 0.91
SGCA-204ENST00000504073 ROBO2Q9HCK4 1378 aa20.72■□□□□ 0.91
SGCA-204ENST00000504073 ANP32CO43423 234 aa20.71■□□□□ 0.91
SGCA-204ENST00000504073 NKTRP30414 1462 aaKnown RBP20.69■□□□□ 0.9
SGCA-204ENST00000504073 NWD1Q149M9 1564 aa20.68■□□□□ 0.9
SGCA-204ENST00000504073 PLEKHH1Q9ULM0 1364 aa20.68■□□□□ 0.9
SGCA-204ENST00000504073 TULP4Q9NRJ4 1543 aa20.68■□□□□ 0.9
SGCA-204ENST00000504073 WASLO00401 505 aaPredicted RBP20.67■□□□□ 0.9
SGCA-204ENST00000504073 CDK19Q9BWU1 502 aa20.67■□□□□ 0.9
SGCA-204ENST00000504073 ADGRB2O60241 1585 aa20.67■□□□□ 0.9
SGCA-204ENST00000504073 STRCP1A6NGW2 1772 aa20.66■□□□□ 0.9
SGCA-204ENST00000504073 TMC1Q8TDI8 760 aa20.65■□□□□ 0.9
SGCA-204ENST00000504073 C14orf37Q86TY3 774 aa20.64■□□□□ 0.89
SGCA-204ENST00000504073 CABP2Q9NPB3 220 aa20.64■□□□□ 0.89
SGCA-204ENST00000504073 LRRC7Q96NW7 1537 aa20.63■□□□□ 0.89
SGCA-204ENST00000504073 POTEAQ6S8J7 498 aa20.63■□□□□ 0.89
SGCA-204ENST00000504073 PROSER2Q86WR7 435 aaPredicted RBP20.63■□□□□ 0.89
SGCA-204ENST00000504073 PANK3Q9H999 370 aa20.62■□□□□ 0.89
SGCA-204ENST00000504073 TERF2IPQ9NYB0 399 aa20.62■□□□□ 0.89
SGCA-204ENST00000504073 KNSTRNQ9Y448 316 aa20.62■□□□□ 0.89
SGCA-204ENST00000504073 HDGFL2Q7Z4V5 671 aaPredicted RBP20.6■□□□□ 0.89
SGCA-204ENST00000504073 NCOA3Q9Y6Q9 1424 aa20.6■□□□□ 0.89
SGCA-204ENST00000504073 KTN1Q86UP2 1357 aaKnown RBP20.59■□□□□ 0.89
SGCA-204ENST00000504073 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.58■□□□□ 0.89
SGCA-204ENST00000504073 MYOM1P52179 1685 aa20.58■□□□□ 0.89
SGCA-204ENST00000504073 CCDC61Q9Y6R9 512 aa20.58■□□□□ 0.89
SGCA-204ENST00000504073 ADGRL3Q9HAR2 1447 aa20.58■□□□□ 0.88
SGCA-204ENST00000504073 ANKRD36BQ8N2N9 1353 aa20.57■□□□□ 0.88
SGCA-204ENST00000504073 ANKARQ7Z5J8 1434 aa20.56■□□□□ 0.88
SGCA-204ENST00000504073 NUDT16Q96DE0 195 aaKnown RBP20.56■□□□□ 0.88
SGCA-204ENST00000504073 CDC42BPGQ6DT37 1551 aa20.55■□□□□ 0.88
SGCA-204ENST00000504073 ATP7BP35670 1465 aa20.55■□□□□ 0.88
SGCA-204ENST00000504073 ITSN1Q15811 1721 aa20.54■□□□□ 0.88
SGCA-204ENST00000504073 SLC12A5Q9H2X9 1139 aa20.54■□□□□ 0.88
SGCA-204ENST00000504073 RALBP1Q15311 655 aa20.53■□□□□ 0.88
SGCA-204ENST00000504073 PPIP5K1Q6PFW1 1433 aa20.53■□□□□ 0.88
SGCA-204ENST00000504073 MIER1Q8N108 512 aa20.52■□□□□ 0.88
SGCA-204ENST00000504073 ZNF692Q9BU19 519 aaPredicted RBP20.52■□□□□ 0.88
SGCA-204ENST00000504073 C19orf44Q9H6X5 657 aa20.52■□□□□ 0.88
SGCA-204ENST00000504073 NPC1L1Q9UHC9 1359 aa20.51■□□□□ 0.87
SGCA-204ENST00000504073 NALCNQ8IZF0 1738 aa20.51■□□□□ 0.87
SGCA-204ENST00000504073 CABP1Q9NZU7 370 aa20.51■□□□□ 0.87
SGCA-204ENST00000504073 TMEM94Q12767 1356 aa20.5■□□□□ 0.87
SGCA-204ENST00000504073 ATF3P18847 181 aa20.5■□□□□ 0.87
SGCA-204ENST00000504073 DCCP43146 1447 aa20.5■□□□□ 0.87
SGCA-204ENST00000504073 CGNL1Q0VF96 1302 aa20.5■□□□□ 0.87
SGCA-204ENST00000504073 FMN2Q9NZ56 1722 aa20.5■□□□□ 0.87
SGCA-204ENST00000504073 MSH6P52701 1360 aa20.49■□□□□ 0.87
SGCA-204ENST00000504073 CCER2I3L3R5 266 aa20.49■□□□□ 0.87
SGCA-204ENST00000504073 PER1O15534 1290 aaPredicted RBP20.49■□□□□ 0.87
SGCA-204ENST00000504073 PRKRIP1Q9H875 184 aaPredicted RBP20.49■□□□□ 0.87
SGCA-204ENST00000504073 NSD2O96028 1365 aa20.47■□□□□ 0.87
SGCA-204ENST00000504073 NSD3Q9BZ95 1437 aa20.47■□□□□ 0.87
SGCA-204ENST00000504073 CADPS2Q86UW7 1296 aa20.47■□□□□ 0.87
SGCA-204ENST00000504073 XIRP1Q702N8 1843 aaKnown RBP20.47■□□□□ 0.87
SGCA-204ENST00000504073 PLEKHG3A1L390 1219 aa20.46■□□□□ 0.87
SGCA-204ENST00000504073 A0A1W2PP64 1363 aa20.46■□□□□ 0.87
SGCA-204ENST00000504073 USP32Q8NFA0 1604 aa20.45■□□□□ 0.87
SGCA-204ENST00000504073 TOPAZ1Q8N9V7 1692 aa20.45■□□□□ 0.86
SGCA-204ENST00000504073 NUTM2FA1L443 756 aa20.44■□□□□ 0.86
SGCA-204ENST00000504073 NGDNQ8NEJ9 315 aaKnown RBP20.44■□□□□ 0.86
SGCA-204ENST00000504073 PRR36Q9H6K5 1346 aa20.44■□□□□ 0.86
SGCA-204ENST00000504073 CC2D1BQ5T0F9 858 aaKnown RBP20.43■□□□□ 0.86
SGCA-204ENST00000504073 RBM33Q96EV2 1170 aaKnown RBP20.42■□□□□ 0.86
SGCA-204ENST00000504073 EDC4Q6P2E9 1401 aaKnown RBP20.42■□□□□ 0.86
SGCA-204ENST00000504073 CNGB1Q14028 1251 aaPredicted RBP20.41■□□□□ 0.86
SGCA-204ENST00000504073 AMER1Q5JTC6 1135 aaPredicted RBP20.41■□□□□ 0.86
SGCA-204ENST00000504073 CARD14Q9BXL6 1004 aa20.41■□□□□ 0.86
SGCA-204ENST00000504073 MYBBP1AQ9BQG0 1328 aaKnown RBP20.41■□□□□ 0.86
SGCA-204ENST00000504073 BRD4O60885 1362 aaPredicted RBP20.41■□□□□ 0.86
SGCA-204ENST00000504073 CPSF1Q10570 1443 aaKnown RBP20.41■□□□□ 0.86
SGCA-204ENST00000504073 PARD3Q8TEW0 1356 aa20.4■□□□□ 0.86
SGCA-204ENST00000504073 PHF8Q9UPP1 1060 aa20.4■□□□□ 0.86
SGCA-204ENST00000504073 AKAP12Q02952 1782 aa20.39■□□□□ 0.86
SGCA-204ENST00000504073 ACEP12821 1306 aa20.39■□□□□ 0.85
SGCA-204ENST00000504073 SRCAPQ6ZRS2 3230 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms