RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 FAM187AA6NFU0 413 aa10.26□□□□□ -0.77
SUB1-204ENST00000504016 ZBTB24O43167 697 aaPredicted RBP10.26□□□□□ -0.77
SUB1-204ENST00000504016 FAM217BQ9NTX9 383 aaPredicted RBP10.26□□□□□ -0.77
SUB1-204ENST00000504016 HLA-CQ95604 372 aa10.25□□□□□ -0.77
SUB1-204ENST00000504016 ZNF787Q6DD87 383 aa10.24□□□□□ -0.77
SUB1-204ENST00000504016 USB1Q9BQ65 265 aaKnown RBP10.24□□□□□ -0.77
SUB1-204ENST00000504016 PKD2L1Q9P0L9 805 aa10.24□□□□□ -0.77
SUB1-204ENST00000504016 HOXA2O43364 376 aa10.23□□□□□ -0.77
SUB1-204ENST00000504016 MYT1Q01538 1121 aa10.23□□□□□ -0.77
SUB1-204ENST00000504016 NUTM1Q86Y26 1132 aa10.23□□□□□ -0.77
SUB1-204ENST00000504016 BARGINQ6ZT62 677 aa10.22□□□□□ -0.77
SUB1-204ENST00000504016 MMP16P51512 607 aa10.21□□□□□ -0.77
SUB1-204ENST00000504016 GUCA2AQ02747 115 aa10.21□□□□□ -0.77
SUB1-204ENST00000504016 ZMYND10O75800 440 aa10.2□□□□□ -0.78
SUB1-204ENST00000504016 ZC3H15Q8WU90 426 aaKnown RBP10.2□□□□□ -0.78
SUB1-204ENST00000504016 REPIN1Q9BWE0 567 aaKnown RBP10.2□□□□□ -0.78
SUB1-204ENST00000504016 SSTR3P32745 418 aaPredicted RBP10.19□□□□□ -0.78
SUB1-204ENST00000504016 DXOO77932 396 aaKnown RBP10.18□□□□□ -0.78
SUB1-204ENST00000504016 TTLL12Q14166 644 aaPredicted RBP10.18□□□□□ -0.78
SUB1-204ENST00000504016 CYP4X1Q8N118 509 aa10.18□□□□□ -0.78
SUB1-204ENST00000504016 CCDC24Q8N4L8 307 aa10.18□□□□□ -0.78
SUB1-204ENST00000504016 SYMPKQ92797 1274 aaKnown RBP10.17□□□□□ -0.78
SUB1-204ENST00000504016 TRIM32Q13049 653 aa10.16□□□□□ -0.78
SUB1-204ENST00000504016 TOR4AQ9NXH8 423 aa10.15□□□□□ -0.78
SUB1-204ENST00000504016 FDX1P10109 184 aa10.14□□□□□ -0.79
SUB1-204ENST00000504016 TTC24A2A3L6 582 aaPredicted RBP10.13□□□□□ -0.79
SUB1-204ENST00000504016 ST8SIA5O15466 376 aa10.13□□□□□ -0.79
SUB1-204ENST00000504016 JUNDP17535 347 aa10.13□□□□□ -0.79
SUB1-204ENST00000504016 AMHR2Q16671 573 aa10.13□□□□□ -0.79
SUB1-204ENST00000504016 C6orf229H3BNL8 230 aa10.12□□□□□ -0.79
SUB1-204ENST00000504016 GIGYF2Q6Y7W6 1299 aaKnown RBP10.12□□□□□ -0.79
SUB1-204ENST00000504016 RETREG3Q86VR2 466 aa10.12□□□□□ -0.79
SUB1-204ENST00000504016 SPIRE2Q8WWL2 714 aa10.12□□□□□ -0.79
SUB1-204ENST00000504016 AAASQ9NRG9 546 aa10.12□□□□□ -0.79
SUB1-204ENST00000504016 WNT7AO00755 349 aa10.11□□□□□ -0.79
SUB1-204ENST00000504016 PCDHGC3Q9UN70 934 aa10.11□□□□□ -0.79
SUB1-204ENST00000504016 POTECB2RU33 542 aa10.09□□□□□ -0.79
SUB1-204ENST00000504016 NDUFV2P19404 249 aa10.09□□□□□ -0.79
SUB1-204ENST00000504016 SNIP1Q8TAD8 396 aaKnown RBP10.09□□□□□ -0.79
SUB1-204ENST00000504016 MRGPRX2Q96LB1 330 aa10.09□□□□□ -0.79
SUB1-204ENST00000504016 BEGAINQ9BUH8 593 aa10.09□□□□□ -0.79
SUB1-204ENST00000504016 MOXD2PA6NHM9 499 aa10.08□□□□□ -0.8
SUB1-204ENST00000504016 NUDT12Q9BQG2 462 aa10.08□□□□□ -0.8
SUB1-204ENST00000504016 AXIN1O15169 862 aa10.07□□□□□ -0.8
SUB1-204ENST00000504016 AVPP01185 164 aa10.07□□□□□ -0.8
SUB1-204ENST00000504016 ZNF775Q96BV0 537 aaPredicted RBP10.07□□□□□ -0.8
SUB1-204ENST00000504016 TRIM66O15016 1216 aa10.06□□□□□ -0.8
SUB1-204ENST00000504016 CRIPAKQ8N1N5 446 aa10.06□□□□□ -0.8
SUB1-204ENST00000504016 AK7Q96M32 723 aa10.06□□□□□ -0.8
SUB1-204ENST00000504016 MS4A1P11836 297 aa10.05□□□□□ -0.8
SUB1-204ENST00000504016 WNT7BP56706 349 aa10.05□□□□□ -0.8
SUB1-204ENST00000504016 CTC1Q2NKJ3 1217 aa10.05□□□□□ -0.8
SUB1-204ENST00000504016 RC3H1Q5TC82 1133 aaKnown RBP10.05□□□□□ -0.8
SUB1-204ENST00000504016 SMPD1P17405 629 aa10.04□□□□□ -0.8
SUB1-204ENST00000504016 SKOR1P84550 965 aa10.04□□□□□ -0.8
SUB1-204ENST00000504016 PARP9Q8IXQ6 854 aa10.04□□□□□ -0.8
SUB1-204ENST00000504016 DACH1Q9UI36 760 aa10.04□□□□□ -0.8
SUB1-204ENST00000504016 J3QL48 77 aa10.03□□□□□ -0.8
SUB1-204ENST00000504016 MTMR2Q13614 643 aa10.03□□□□□ -0.8
SUB1-204ENST00000504016 DIXDC1Q155Q3 683 aa10.03□□□□□ -0.8
SUB1-204ENST00000504016 PTCRAQ6ISU1 281 aaPredicted RBP10.03□□□□□ -0.8
SUB1-204ENST00000504016 TBC1D2Q9BYX2 928 aa10.03□□□□□ -0.8
SUB1-204ENST00000504016 CCNYL3P0C7X3 344 aa10.02□□□□□ -0.81
SUB1-204ENST00000504016 PRR7Q8TB68 274 aa10.02□□□□□ -0.81
SUB1-204ENST00000504016 SPDYE5A6NIY4 337 aa10.01□□□□□ -0.81
SUB1-204ENST00000504016 SMCPP49901 116 aaPredicted RBP10.01□□□□□ -0.81
SUB1-204ENST00000504016 PTPRNQ16849 979 aa10□□□□□ -0.81
SUB1-204ENST00000504016 GJA5P36382 358 aa9.98□□□□□ -0.81
SUB1-204ENST00000504016 RSBN1LQ6PCB5 846 aaPredicted RBP9.98□□□□□ -0.81
SUB1-204ENST00000504016 EHBP1Q8NDI1 1231 aa9.98□□□□□ -0.81
SUB1-204ENST00000504016 EVA1BQ9NVM1 165 aa9.98□□□□□ -0.81
SUB1-204ENST00000504016 GMPR2Q9P2T1 348 aaKnown RBP9.98□□□□□ -0.81
SUB1-204ENST00000504016 C11orf95C9JLR9 678 aaPredicted RBP9.97□□□□□ -0.81
SUB1-204ENST00000504016 ALDH1A1P00352 501 aa9.97□□□□□ -0.81
SUB1-204ENST00000504016 DESI1Q6ICB0 168 aa9.97□□□□□ -0.81
SUB1-204ENST00000504016 HPS1Q92902 700 aa9.97□□□□□ -0.81
SUB1-204ENST00000504016 PDE4DQ08499 809 aa9.96□□□□□ -0.82
SUB1-204ENST00000504016 KCNH2Q12809 1159 aa9.96□□□□□ -0.82
SUB1-204ENST00000504016 UNC93B1Q9H1C4 597 aa9.96□□□□□ -0.82
SUB1-204ENST00000504016 PCDHB15Q9Y5E8 787 aa9.96□□□□□ -0.82
SUB1-204ENST00000504016 SPTLC1O15269 473 aa9.95□□□□□ -0.82
SUB1-204ENST00000504016 SH3BP2P78314 561 aa9.95□□□□□ -0.82
SUB1-204ENST00000504016 RIC3Q7Z5B4 369 aa9.95□□□□□ -0.82
SUB1-204ENST00000504016 LINC01559Q495D7 138 aa9.94□□□□□ -0.82
SUB1-204ENST00000504016 ZBTB3Q9H5J0 574 aa9.94□□□□□ -0.82
SUB1-204ENST00000504016 SLC24A3Q9HC58 644 aa9.94□□□□□ -0.82
SUB1-204ENST00000504016 SIAH2O43255 324 aa9.93□□□□□ -0.82
SUB1-204ENST00000504016 HRCP23327 699 aa9.93□□□□□ -0.82
SUB1-204ENST00000504016 CTHP32929 405 aa9.93□□□□□ -0.82
SUB1-204ENST00000504016 CSPP1Q1MSJ5 1256 aa9.93□□□□□ -0.82
SUB1-204ENST00000504016 BAP1Q92560 729 aa9.93□□□□□ -0.82
SUB1-204ENST00000504016 ATP13A2Q9NQ11 1180 aa9.93□□□□□ -0.82
SUB1-204ENST00000504016 WASF2Q9Y6W5 498 aa9.92□□□□□ -0.82
SUB1-204ENST00000504016 CFAP99D6REC4 459 aa9.91□□□□□ -0.82
SUB1-204ENST00000504016 LYPD8Q6UX82 237 aa9.91□□□□□ -0.82
SUB1-204ENST00000504016 PRPF38BQ5VTL8 546 aaKnown RBP9.9□□□□□ -0.82
SUB1-204ENST00000504016 CABLES1Q8TDN4 633 aa9.9□□□□□ -0.82
SUB1-204ENST00000504016 ZNF511Q8NB15 262 aa9.89□□□□□ -0.83
SUB1-204ENST00000504016 NUTM2BA6NNL0 878 aaPredicted RBP9.88□□□□□ -0.83
SUB1-204ENST00000504016 NUTM2EB1AL46 878 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms