RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 CAMSAP2Q08AD1 1489 aa19.78■□□□□ 0.76
HMGXB3-202ENST00000503427 TSPYL4Q9UJ04 414 aa19.77■□□□□ 0.76
HMGXB3-202ENST00000503427 MEX3CQ5U5Q3 659 aaKnown RBP19.77■□□□□ 0.76
HMGXB3-202ENST00000503427 DIAPH3Q9NSV4 1193 aa19.77■□□□□ 0.76
HMGXB3-202ENST00000503427 KIF14Q15058 1648 aa19.77■□□□□ 0.76
HMGXB3-202ENST00000503427 ERBINQ96RT1 1412 aa19.77■□□□□ 0.76
HMGXB3-202ENST00000503427 UNC13AQ9UPW8 1703 aa19.77■□□□□ 0.75
HMGXB3-202ENST00000503427 FAM184AQ8NB25 1140 aa19.76■□□□□ 0.75
HMGXB3-202ENST00000503427 PTPN23Q9H3S7 1636 aa19.76■□□□□ 0.75
HMGXB3-202ENST00000503427 FKBP5Q13451 457 aaPredicted RBP19.75■□□□□ 0.75
HMGXB3-202ENST00000503427 POGZQ7Z3K3 1410 aa19.75■□□□□ 0.75
HMGXB3-202ENST00000503427 ZNF692Q9BU19 519 aaPredicted RBP19.75■□□□□ 0.75
HMGXB3-202ENST00000503427 TCP11L2Q8N4U5 519 aa19.74■□□□□ 0.75
HMGXB3-202ENST00000503427 CLSTN1O94985 981 aa19.74■□□□□ 0.75
HMGXB3-202ENST00000503427 C22orf23Q9BZE7 217 aa19.74■□□□□ 0.75
HMGXB3-202ENST00000503427 GOLGA6L19H0YKK7 550 aa19.74■□□□□ 0.75
HMGXB3-202ENST00000503427 ZKSCAN1P17029 563 aaPredicted RBP19.74■□□□□ 0.75
HMGXB3-202ENST00000503427 LRRFIP1Q32MZ4 808 aaKnown RBP19.73■□□□□ 0.75
HMGXB3-202ENST00000503427 ABCC5O15440 1437 aa19.73■□□□□ 0.75
HMGXB3-202ENST00000503427 FRAT2O75474 233 aaPredicted RBP19.73■□□□□ 0.75
HMGXB3-202ENST00000503427 NUCB2P80303 420 aa19.73■□□□□ 0.75
HMGXB3-202ENST00000503427 INTS3Q68E01 1043 aaKnown RBP19.73■□□□□ 0.75
HMGXB3-202ENST00000503427 RASSF8Q8NHQ8 419 aa19.73■□□□□ 0.75
HMGXB3-202ENST00000503427 CD109Q6YHK3 1445 aa19.72■□□□□ 0.75
HMGXB3-202ENST00000503427 SLC12A5Q9H2X9 1139 aa19.72■□□□□ 0.75
HMGXB3-202ENST00000503427 NFKBIBQ15653 356 aa19.72■□□□□ 0.75
HMGXB3-202ENST00000503427 TOMM22Q9NS69 142 aa19.72■□□□□ 0.75
HMGXB3-202ENST00000503427 PHF23Q9BUL5 403 aaPredicted RBP19.71■□□□□ 0.75
HMGXB3-202ENST00000503427 BECN2A8MW95 431 aa19.71■□□□□ 0.75
HMGXB3-202ENST00000503427 GAS2L2Q8NHY3 880 aa19.71■□□□□ 0.75
HMGXB3-202ENST00000503427 CDK19Q9BWU1 502 aa19.71■□□□□ 0.75
HMGXB3-202ENST00000503427 FOXD4L6Q3SYB3 417 aaPredicted RBP19.71■□□□□ 0.75
HMGXB3-202ENST00000503427 FOXD4L3Q6VB84 417 aaPredicted RBP19.71■□□□□ 0.75
HMGXB3-202ENST00000503427 PANK1Q8TE04 598 aa19.71■□□□□ 0.75
HMGXB3-202ENST00000503427 G3V3G9 751 aa19.7■□□□□ 0.74
HMGXB3-202ENST00000503427 DCAF8Q5TAQ9 597 aa19.7■□□□□ 0.74
HMGXB3-202ENST00000503427 GOLGA6L1Q8N7Z2 621 aa19.7■□□□□ 0.74
HMGXB3-202ENST00000503427 ABTB2Q8N961 1025 aa19.7■□□□□ 0.74
HMGXB3-202ENST00000503427 AKNAQ7Z591 1439 aa19.7■□□□□ 0.74
HMGXB3-202ENST00000503427 LNPKQ9C0E8 428 aa19.7■□□□□ 0.74
HMGXB3-202ENST00000503427 NLRP2Q9NX02 1062 aa19.7■□□□□ 0.74
HMGXB3-202ENST00000503427 ATAD2Q6PL18 1390 aa19.69■□□□□ 0.74
HMGXB3-202ENST00000503427 HSP90AB4PQ58FF6 505 aa19.69■□□□□ 0.74
HMGXB3-202ENST00000503427 TPM3P06753 285 aa19.69■□□□□ 0.74
HMGXB3-202ENST00000503427 PROSER2Q86WR7 435 aaPredicted RBP19.69■□□□□ 0.74
HMGXB3-202ENST00000503427 NECTIN2Q92692 538 aa19.69■□□□□ 0.74
HMGXB3-202ENST00000503427 NOC3LQ8WTT2 800 aaKnown RBP19.68■□□□□ 0.74
HMGXB3-202ENST00000503427 ZNF608Q9ULD9 1512 aaPredicted RBP19.68■□□□□ 0.74
HMGXB3-202ENST00000503427 NUTM2GQ5VZR2 741 aa19.68■□□□□ 0.74
HMGXB3-202ENST00000503427 ANO2Q9NQ90 1003 aa19.67■□□□□ 0.74
HMGXB3-202ENST00000503427 CDCA7LQ96GN5 454 aa19.67■□□□□ 0.74
HMGXB3-202ENST00000503427 RTEL1-TNFRSF6BF6WH68 1400 aa19.67■□□□□ 0.74
HMGXB3-202ENST00000503427 PRKAR2BP31323 418 aa19.67■□□□□ 0.74
HMGXB3-202ENST00000503427 ESCO1Q5FWF5 840 aa19.67■□□□□ 0.74
HMGXB3-202ENST00000503427 CABP1Q9NZU7 370 aa19.67■□□□□ 0.74
HMGXB3-202ENST00000503427 ADGRL1O94910 1474 aa19.67■□□□□ 0.74
HMGXB3-202ENST00000503427 IFIT2P09913 472 aaKnown RBP19.67■□□□□ 0.74
HMGXB3-202ENST00000503427 WDR97A6NE52 1622 aa19.65■□□□□ 0.74
HMGXB3-202ENST00000503427 RNF20Q5VTR2 975 aa19.65■□□□□ 0.74
HMGXB3-202ENST00000503427 CPLX2Q6PUV4 134 aaKnown RBP19.65■□□□□ 0.74
HMGXB3-202ENST00000503427 G3BP1Q13283 466 aaKnown RBP eCLIP19.65■□□□□ 0.74
HMGXB3-202ENST00000503427 TNNT3P45378 269 aaPredicted RBP19.64■□□□□ 0.74
HMGXB3-202ENST00000503427 CREBRFQ8IUR6 639 aa19.64■□□□□ 0.74
HMGXB3-202ENST00000503427 NCOA1Q15788 1441 aa19.64■□□□□ 0.74
HMGXB3-202ENST00000503427 CDC45O75419 566 aa19.64■□□□□ 0.73
HMGXB3-202ENST00000503427 ANKLE2Q86XL3 938 aa19.64■□□□□ 0.73
HMGXB3-202ENST00000503427 PLEKHO1Q53GL0 409 aaPredicted RBP19.63■□□□□ 0.73
HMGXB3-202ENST00000503427 MCTP1Q6DN14 999 aa19.63■□□□□ 0.73
HMGXB3-202ENST00000503427 PNISRQ8TF01 805 aaKnown RBP19.63■□□□□ 0.73
HMGXB3-202ENST00000503427 PDE3AQ14432 1141 aa19.63■□□□□ 0.73
HMGXB3-202ENST00000503427 AMER1Q5JTC6 1135 aaPredicted RBP19.62■□□□□ 0.73
HMGXB3-202ENST00000503427 SYTL4Q96C24 671 aaPredicted RBP19.62■□□□□ 0.73
HMGXB3-202ENST00000503427 SMG6Q86US8 1419 aaKnown RBP19.62■□□□□ 0.73
HMGXB3-202ENST00000503427 MRE11P49959 708 aa19.61■□□□□ 0.73
HMGXB3-202ENST00000503427 CCDC30Q5VVM6 783 aa19.61■□□□□ 0.73
HMGXB3-202ENST00000503427 SYNE3Q6ZMZ3 975 aa19.61■□□□□ 0.73
HMGXB3-202ENST00000503427 AKAP17AQ02040 695 aaKnown RBP19.6■□□□□ 0.73
HMGXB3-202ENST00000503427 SMC3Q9UQE7 1217 aa19.6■□□□□ 0.73
HMGXB3-202ENST00000503427 TPD52L1Q16890 204 aaPredicted RBP19.6■□□□□ 0.73
HMGXB3-202ENST00000503427 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.6■□□□□ 0.73
HMGXB3-202ENST00000503427 RIC3Q7Z5B4 369 aa19.6■□□□□ 0.73
HMGXB3-202ENST00000503427 ERC2O15083 957 aa19.59■□□□□ 0.73
HMGXB3-202ENST00000503427 CT47B1P0C2W7 299 aaPredicted RBP19.59■□□□□ 0.73
HMGXB3-202ENST00000503427 FAM43AQ8N2R8 423 aa19.59■□□□□ 0.73
HMGXB3-202ENST00000503427 THOC2Q8NI27 1593 aaKnown RBP19.58■□□□□ 0.73
HMGXB3-202ENST00000503427 GNAI3P08754 354 aa19.58■□□□□ 0.73
HMGXB3-202ENST00000503427 UBTFL1P0CB47 393 aaPredicted RBP19.58■□□□□ 0.73
HMGXB3-202ENST00000503427 TSR1Q2NL82 804 aaKnown RBP19.58■□□□□ 0.73
HMGXB3-202ENST00000503427 TPM1P09493 284 aa19.58■□□□□ 0.73
HMGXB3-202ENST00000503427 WDR63Q8IWG1 891 aa19.58■□□□□ 0.73
HMGXB3-202ENST00000503427 EXOSC9Q06265 439 aaKnown RBP19.58■□□□□ 0.72
HMGXB3-202ENST00000503427 BICD2Q8TD16 824 aa19.58■□□□□ 0.72
HMGXB3-202ENST00000503427 SLC26A8Q96RN1 970 aa19.57■□□□□ 0.72
HMGXB3-202ENST00000503427 VPS37CA5D8V6 355 aaPredicted RBP19.56■□□□□ 0.72
HMGXB3-202ENST00000503427 TRIM29Q14134 588 aa19.56■□□□□ 0.72
HMGXB3-202ENST00000503427 CPLX1O14810 134 aa19.56■□□□□ 0.72
HMGXB3-202ENST00000503427 TWISTNBQ3B726 338 aaPredicted RBP19.56■□□□□ 0.72
HMGXB3-202ENST00000503427 PDZRN3Q9UPQ7 1066 aa19.56■□□□□ 0.72
HMGXB3-202ENST00000503427 CCDC61Q9Y6R9 512 aa19.55■□□□□ 0.72
HMGXB3-202ENST00000503427 SULT6B1Q6IMI4 303 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms