RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 CSPP1Q1MSJ5 1256 aa12.46□□□□□ -0.41
NIPBL-203ENST00000503274 SALL2Q9Y467 1007 aaPredicted RBP12.46□□□□□ -0.41
NIPBL-203ENST00000503274 ZPR1O75312 459 aa12.45□□□□□ -0.42
NIPBL-203ENST00000503274 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.45□□□□□ -0.42
NIPBL-203ENST00000503274 ZNF516Q92618 1163 aa12.44□□□□□ -0.42
NIPBL-203ENST00000503274 A0A0G2JS52 829 aa12.43□□□□□ -0.42
NIPBL-203ENST00000503274 FMNL1O95466 1100 aaPredicted RBP12.43□□□□□ -0.42
NIPBL-203ENST00000503274 PRPF38BQ5VTL8 546 aaKnown RBP12.43□□□□□ -0.42
NIPBL-203ENST00000503274 BRICD5Q6PL45 260 aa12.43□□□□□ -0.42
NIPBL-203ENST00000503274 ZBTB3Q9H5J0 574 aa12.43□□□□□ -0.42
NIPBL-203ENST00000503274 C6orf229H3BNL8 230 aa12.42□□□□□ -0.42
NIPBL-203ENST00000503274 MTMR2Q13614 643 aa12.42□□□□□ -0.42
NIPBL-203ENST00000503274 THAP11Q96EK4 314 aa12.42□□□□□ -0.42
NIPBL-203ENST00000503274 LILRB3O75022 631 aa12.41□□□□□ -0.42
NIPBL-203ENST00000503274 HRCP23327 699 aa12.41□□□□□ -0.42
NIPBL-203ENST00000503274 KCNC4Q03721 635 aa12.41□□□□□ -0.42
NIPBL-203ENST00000503274 QPCTQ16769 361 aa12.41□□□□□ -0.42
NIPBL-203ENST00000503274 RNF19BQ6ZMZ0 732 aa12.41□□□□□ -0.42
NIPBL-203ENST00000503274 SYMPKQ92797 1274 aaKnown RBP12.41□□□□□ -0.42
NIPBL-203ENST00000503274 SPDYE5A6NIY4 337 aa12.4□□□□□ -0.42
NIPBL-203ENST00000503274 NUTM2BA6NNL0 878 aaPredicted RBP12.4□□□□□ -0.42
NIPBL-203ENST00000503274 NUTM2EB1AL46 878 aaPredicted RBP12.4□□□□□ -0.42
NIPBL-203ENST00000503274 NUTM2DQ5VT03 806 aaPredicted RBP12.4□□□□□ -0.42
NIPBL-203ENST00000503274 NUTM2AQ8IVF1 878 aaPredicted RBP12.4□□□□□ -0.42
NIPBL-203ENST00000503274 CABLES1Q8TDN4 633 aa12.4□□□□□ -0.42
NIPBL-203ENST00000503274 SPSB2Q99619 263 aa12.39□□□□□ -0.43
NIPBL-203ENST00000503274 TLL1O43897 1013 aa12.38□□□□□ -0.43
NIPBL-203ENST00000503274 RGS20O76081 388 aa12.38□□□□□ -0.43
NIPBL-203ENST00000503274 RETREG3Q86VR2 466 aa12.38□□□□□ -0.43
NIPBL-203ENST00000503274 PPP2R2DQ66LE6 453 aa12.37□□□□□ -0.43
NIPBL-203ENST00000503274 USB1Q9BQ65 265 aaKnown RBP12.37□□□□□ -0.43
NIPBL-203ENST00000503274 ADH1BP00325 375 aa12.36□□□□□ -0.43
NIPBL-203ENST00000503274 RTL5Q5HYW3 569 aaPredicted RBP12.36□□□□□ -0.43
NIPBL-203ENST00000503274 FBXO31Q5XUX0 539 aaPredicted RBP12.35□□□□□ -0.43
NIPBL-203ENST00000503274 NKX2-3Q8TAU0 364 aa12.35□□□□□ -0.43
NIPBL-203ENST00000503274 FAM160A2Q8N612 972 aaPredicted RBP12.33□□□□□ -0.44
NIPBL-203ENST00000503274 PRR7Q8TB68 274 aa12.33□□□□□ -0.44
NIPBL-203ENST00000503274 RFC5P40937 340 aa12.32□□□□□ -0.44
NIPBL-203ENST00000503274 MSS51Q4VC12 460 aa12.32□□□□□ -0.44
NIPBL-203ENST00000503274 CFAP99D6REC4 459 aa12.31□□□□□ -0.44
NIPBL-203ENST00000503274 IRX2Q9BZI1 471 aaPredicted RBP12.31□□□□□ -0.44
NIPBL-203ENST00000503274 SLC6A16Q9GZN6 736 aa12.3□□□□□ -0.44
NIPBL-203ENST00000503274 TMEM259Q4ZIN3 620 aa12.28□□□□□ -0.44
NIPBL-203ENST00000503274 DESI1Q6ICB0 168 aa12.28□□□□□ -0.44
NIPBL-203ENST00000503274 TSC1Q92574 1164 aa12.28□□□□□ -0.44
NIPBL-203ENST00000503274 JUNDP17535 347 aa12.27□□□□□ -0.45
NIPBL-203ENST00000503274 HELBQ8NG08 1087 aaPredicted RBP12.27□□□□□ -0.45
NIPBL-203ENST00000503274 PRDM9Q9NQV7 894 aa12.27□□□□□ -0.45
NIPBL-203ENST00000503274 AP1G2O75843 785 aa12.26□□□□□ -0.45
NIPBL-203ENST00000503274 S1PR4O95977 384 aa12.26□□□□□ -0.45
NIPBL-203ENST00000503274 MMP16P51512 607 aa12.26□□□□□ -0.45
NIPBL-203ENST00000503274 DXOO77932 396 aaKnown RBP12.25□□□□□ -0.45
NIPBL-203ENST00000503274 GGCXP38435 758 aa12.23□□□□□ -0.45
NIPBL-203ENST00000503274 CTDSPL2Q05D32 466 aa12.23□□□□□ -0.45
NIPBL-203ENST00000503274 BANK1Q8NDB2 785 aa12.22□□□□□ -0.45
NIPBL-203ENST00000503274 GTF3C3Q9Y5Q9 886 aa12.22□□□□□ -0.45
NIPBL-203ENST00000503274 PPP1R18Q6NYC8 613 aa12.21□□□□□ -0.45
NIPBL-203ENST00000503274 LYPD8Q6UX82 237 aa12.21□□□□□ -0.45
NIPBL-203ENST00000503274 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.2□□□□□ -0.46
NIPBL-203ENST00000503274 PER1O15534 1290 aaPredicted RBP12.19□□□□□ -0.46
NIPBL-203ENST00000503274 PTPRNQ16849 979 aa12.19□□□□□ -0.46
NIPBL-203ENST00000503274 RNF223E7ERA6 249 aa12.18□□□□□ -0.46
NIPBL-203ENST00000503274 PPEF1O14829 653 aaPredicted RBP12.18□□□□□ -0.46
NIPBL-203ENST00000503274 USP17L8P0C7I0 530 aa12.18□□□□□ -0.46
NIPBL-203ENST00000503274 NUDT12Q9BQG2 462 aa12.17□□□□□ -0.46
NIPBL-203ENST00000503274 CCNYL3P0C7X3 344 aa12.16□□□□□ -0.46
NIPBL-203ENST00000503274 ANKLE1Q8NAG6 615 aa12.16□□□□□ -0.46
NIPBL-203ENST00000503274 LRRN4Q8WUT4 740 aa12.16□□□□□ -0.46
NIPBL-203ENST00000503274 FCF1Q9Y324 198 aaKnown RBP12.16□□□□□ -0.46
NIPBL-203ENST00000503274 CCDC24Q8N4L8 307 aa12.15□□□□□ -0.46
NIPBL-203ENST00000503274 SNRKQ9NRH2 765 aa12.14□□□□□ -0.47
NIPBL-203ENST00000503274 EVA1BQ9NVM1 165 aa12.14□□□□□ -0.47
NIPBL-203ENST00000503274 FLIIQ13045 1269 aa12.13□□□□□ -0.47
NIPBL-203ENST00000503274 F12P00748 615 aaPredicted RBP12.11□□□□□ -0.47
NIPBL-203ENST00000503274 CTHP32929 405 aa12.11□□□□□ -0.47
NIPBL-203ENST00000503274 KCNH2Q12809 1159 aa12.11□□□□□ -0.47
NIPBL-203ENST00000503274 SOCS7O14512 581 aa12.1□□□□□ -0.47
NIPBL-203ENST00000503274 MCM6Q14566 821 aa12.1□□□□□ -0.47
NIPBL-203ENST00000503274 MTMR14Q8NCE2 650 aa12.1□□□□□ -0.47
NIPBL-203ENST00000503274 HMX1Q9NP08 348 aaPredicted RBP12.1□□□□□ -0.47
NIPBL-203ENST00000503274 MAP10Q9P2G4 905 aa12.09□□□□□ -0.47
NIPBL-203ENST00000503274 APBB1O00213 710 aa12.07□□□□□ -0.48
NIPBL-203ENST00000503274 NR6A1Q15406 480 aa12.07□□□□□ -0.48
NIPBL-203ENST00000503274 PLA2G2CQ5R387 149 aa12.07□□□□□ -0.48
NIPBL-203ENST00000503274 PTCRAQ6ISU1 281 aaPredicted RBP12.07□□□□□ -0.48
NIPBL-203ENST00000503274 Q6ZNB5 142 aa12.07□□□□□ -0.48
NIPBL-203ENST00000503274 ZBTB24O43167 697 aaPredicted RBP12.06□□□□□ -0.48
NIPBL-203ENST00000503274 GJD4Q96KN9 370 aaPredicted RBP12.06□□□□□ -0.48
NIPBL-203ENST00000503274 PRKD2Q9BZL6 878 aa12.06□□□□□ -0.48
NIPBL-203ENST00000503274 EPS8L1Q8TE68 723 aa12.05□□□□□ -0.48
NIPBL-203ENST00000503274 TRIM34Q9BYJ4 488 aa12.05□□□□□ -0.48
NIPBL-203ENST00000503274 UNC93B1Q9H1C4 597 aa12.05□□□□□ -0.48
NIPBL-203ENST00000503274 RPIAP49247 311 aa12.02□□□□□ -0.49
NIPBL-203ENST00000503274 PRM3Q9NNZ6 103 aa12.02□□□□□ -0.49
NIPBL-203ENST00000503274 LIAT1Q6ZQX7 453 aa12.01□□□□□ -0.49
NIPBL-203ENST00000503274 PNMA1Q8ND90 353 aa12.01□□□□□ -0.49
NIPBL-203ENST00000503274 ARMC2Q8NEN0 867 aa12.01□□□□□ -0.49
NIPBL-203ENST00000503274 UBTFP17480 764 aaKnown RBP12□□□□□ -0.49
NIPBL-203ENST00000503274 SLC19A1P41440 591 aa12□□□□□ -0.49
NIPBL-203ENST00000503274 EMID1Q96A84 441 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms