RNA–Protein interactions for RNA: ENST00000503204.1

CPNE4-203, Transcript of copine 4, humanhuman

TSL 2

Gene CPNE4, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-203ENST00000503204 RNF223E7ERA6 249 aa10.04□□□□□ -0.8
CPNE4-203ENST00000503204 SPTLC1O15269 473 aa10.04□□□□□ -0.8
CPNE4-203ENST00000503204 PRKCSHP14314 528 aaPredicted RBP10.04□□□□□ -0.8
CPNE4-203ENST00000503204 MYSM1Q5VVJ2 828 aa10.04□□□□□ -0.8
CPNE4-203ENST00000503204 FAM160A2Q8N612 972 aaPredicted RBP10.04□□□□□ -0.8
CPNE4-203ENST00000503204 PCDHGC3Q9UN70 934 aa10.04□□□□□ -0.8
CPNE4-203ENST00000503204 BRPF1P55201 1214 aaPredicted RBP10.03□□□□□ -0.8
CPNE4-203ENST00000503204 ANKLE1Q8NAG6 615 aa10.03□□□□□ -0.8
CPNE4-203ENST00000503204 FAM117AQ9C073 453 aa10.03□□□□□ -0.8
CPNE4-203ENST00000503204 RIC3Q7Z5B4 369 aa10.02□□□□□ -0.81
CPNE4-203ENST00000503204 RETREG3Q86VR2 466 aa10.02□□□□□ -0.81
CPNE4-203ENST00000503204 C6orf229H3BNL8 230 aa10.01□□□□□ -0.81
CPNE4-203ENST00000503204 SPDYE5A6NIY4 337 aa10□□□□□ -0.81
CPNE4-203ENST00000503204 MTMR2Q13614 643 aa10□□□□□ -0.81
CPNE4-203ENST00000503204 TUSC1Q2TAM9 212 aa10□□□□□ -0.81
CPNE4-203ENST00000503204 MMP16P51512 607 aa9.99□□□□□ -0.81
CPNE4-203ENST00000503204 SYMPKQ92797 1274 aaKnown RBP9.99□□□□□ -0.81
CPNE4-203ENST00000503204 PRDM9Q9NQV7 894 aa9.99□□□□□ -0.81
CPNE4-203ENST00000503204 PLEKHG3A1L390 1219 aa9.98□□□□□ -0.81
CPNE4-203ENST00000503204 PPEF1O14829 653 aaPredicted RBP9.98□□□□□ -0.81
CPNE4-203ENST00000503204 CLK2P49760 499 aaKnown RBP9.98□□□□□ -0.81
CPNE4-203ENST00000503204 SH3D19Q5HYK7 790 aa9.98□□□□□ -0.81
CPNE4-203ENST00000503204 PRPF38BQ5VTL8 546 aaKnown RBP9.98□□□□□ -0.81
CPNE4-203ENST00000503204 ZBTB3Q9H5J0 574 aa9.98□□□□□ -0.81
CPNE4-203ENST00000503204 V9GY48 417 aaPredicted RBP9.98□□□□□ -0.81
CPNE4-203ENST00000503204 DXOO77932 396 aaKnown RBP9.97□□□□□ -0.81
CPNE4-203ENST00000503204 LIMD1Q9UGP4 676 aa9.97□□□□□ -0.81
CPNE4-203ENST00000503204 PCDHB15Q9Y5E8 787 aa9.97□□□□□ -0.81
CPNE4-203ENST00000503204 SKIV2LQ15477 1246 aaKnown RBP9.96□□□□□ -0.82
CPNE4-203ENST00000503204 PRKD2Q9BZL6 878 aa9.96□□□□□ -0.82
CPNE4-203ENST00000503204 FCF1Q9Y324 198 aaKnown RBP9.96□□□□□ -0.82
CPNE4-203ENST00000503204 JUNDP17535 347 aa9.95□□□□□ -0.82
CPNE4-203ENST00000503204 POLR3EQ9NVU0 708 aa9.95□□□□□ -0.82
CPNE4-203ENST00000503204 HRCP23327 699 aa9.94□□□□□ -0.82
CPNE4-203ENST00000503204 CSPP1Q1MSJ5 1256 aa9.94□□□□□ -0.82
CPNE4-203ENST00000503204 PRR7Q8TB68 274 aa9.94□□□□□ -0.82
CPNE4-203ENST00000503204 SLC19A1P41440 591 aa9.93□□□□□ -0.82
CPNE4-203ENST00000503204 LILRB3O75022 631 aa9.92□□□□□ -0.82
CPNE4-203ENST00000503204 DESI1Q6ICB0 168 aa9.92□□□□□ -0.82
CPNE4-203ENST00000503204 IL27Q8NEV9 243 aa9.92□□□□□ -0.82
CPNE4-203ENST00000503204 CABLES1Q8TDN4 633 aa9.92□□□□□ -0.82
CPNE4-203ENST00000503204 GOPCQ9HD26 462 aa9.92□□□□□ -0.82
CPNE4-203ENST00000503204 NUTM2BA6NNL0 878 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-203ENST00000503204 NUTM2EB1AL46 878 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-203ENST00000503204 QPCTQ16769 361 aa9.91□□□□□ -0.82
CPNE4-203ENST00000503204 PLA2G2CQ5R387 149 aa9.91□□□□□ -0.82
CPNE4-203ENST00000503204 NUTM2DQ5VT03 806 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-203ENST00000503204 NUTM2AQ8IVF1 878 aaPredicted RBP9.91□□□□□ -0.82
CPNE4-203ENST00000503204 EMID1Q96A84 441 aaPredicted RBP9.9□□□□□ -0.82
CPNE4-203ENST00000503204 CFAP99D6REC4 459 aa9.89□□□□□ -0.83
CPNE4-203ENST00000503204 RPIAP49247 311 aa9.89□□□□□ -0.83
CPNE4-203ENST00000503204 PTPRNQ16849 979 aa9.89□□□□□ -0.83
CPNE4-203ENST00000503204 LIAT1Q6ZQX7 453 aa9.89□□□□□ -0.83
CPNE4-203ENST00000503204 ZBTB24O43167 697 aaPredicted RBP9.88□□□□□ -0.83
CPNE4-203ENST00000503204 NUDT12Q9BQG2 462 aa9.88□□□□□ -0.83
CPNE4-203ENST00000503204 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.88□□□□□ -0.83
CPNE4-203ENST00000503204 ATP1B4Q9UN42 357 aaPredicted RBP9.88□□□□□ -0.83
CPNE4-203ENST00000503204 SPRYD7Q5W111 196 aa9.87□□□□□ -0.83
CPNE4-203ENST00000503204 CCDC24Q8N4L8 307 aa9.87□□□□□ -0.83
CPNE4-203ENST00000503204 PCMTD1Q96MG8 357 aaPredicted RBP9.87□□□□□ -0.83
CPNE4-203ENST00000503204 CCNYL3P0C7X3 344 aa9.86□□□□□ -0.83
CPNE4-203ENST00000503204 PROCA1Q8NCQ7 364 aaPredicted RBP9.86□□□□□ -0.83
CPNE4-203ENST00000503204 CD2BP2O95400 341 aaKnown RBP9.85□□□□□ -0.83
CPNE4-203ENST00000503204 RTL5Q5HYW3 569 aaPredicted RBP9.85□□□□□ -0.83
CPNE4-203ENST00000503204 LYPD8Q6UX82 237 aa9.85□□□□□ -0.83
CPNE4-203ENST00000503204 ZNF598Q86UK7 904 aaKnown RBP9.85□□□□□ -0.83
CPNE4-203ENST00000503204 HELBQ8NG08 1087 aaPredicted RBP9.85□□□□□ -0.83
CPNE4-203ENST00000503204 PPP2R2DQ66LE6 453 aa9.84□□□□□ -0.83
CPNE4-203ENST00000503204 ZNF697Q5TEC3 545 aa9.83□□□□□ -0.84
CPNE4-203ENST00000503204 TSC1Q92574 1164 aa9.83□□□□□ -0.84
CPNE4-203ENST00000503204 IRX2Q9BZI1 471 aaPredicted RBP9.83□□□□□ -0.84
CPNE4-203ENST00000503204 EVA1BQ9NVM1 165 aa9.83□□□□□ -0.84
CPNE4-203ENST00000503204 TRIM32Q13049 653 aa9.81□□□□□ -0.84
CPNE4-203ENST00000503204 KCNH2Q12809 1159 aa9.8□□□□□ -0.84
CPNE4-203ENST00000503204 LAPTM4AQ15012 233 aa9.79□□□□□ -0.84
CPNE4-203ENST00000503204 PER1O15534 1290 aaPredicted RBP9.78□□□□□ -0.84
CPNE4-203ENST00000503204 FBXO31Q5XUX0 539 aaPredicted RBP9.78□□□□□ -0.84
CPNE4-203ENST00000503204 PTCRAQ6ISU1 281 aaPredicted RBP9.78□□□□□ -0.84
CPNE4-203ENST00000503204 F12P00748 615 aaPredicted RBP9.77□□□□□ -0.85
CPNE4-203ENST00000503204 CTHP32929 405 aa9.77□□□□□ -0.85
CPNE4-203ENST00000503204 RFC5P40937 340 aa9.77□□□□□ -0.85
CPNE4-203ENST00000503204 PRR20EP86478 221 aa9.77□□□□□ -0.85
CPNE4-203ENST00000503204 PRR20CP86479 221 aa9.77□□□□□ -0.85
CPNE4-203ENST00000503204 PRR20DP86480 221 aa9.77□□□□□ -0.85
CPNE4-203ENST00000503204 PRR20BP86481 221 aa9.77□□□□□ -0.85
CPNE4-203ENST00000503204 PRR20AP86496 221 aa9.77□□□□□ -0.85
CPNE4-203ENST00000503204 UNC93B1Q9H1C4 597 aa9.77□□□□□ -0.85
CPNE4-203ENST00000503204 PDZRN3Q9UPQ7 1066 aa9.77□□□□□ -0.85
CPNE4-203ENST00000503204 WNT7BP56706 349 aa9.76□□□□□ -0.85
CPNE4-203ENST00000503204 GDF9O60383 454 aa9.75□□□□□ -0.85
CPNE4-203ENST00000503204 GFRA3O60609 400 aa9.75□□□□□ -0.85
CPNE4-203ENST00000503204 AP1G2O75843 785 aa9.75□□□□□ -0.85
CPNE4-203ENST00000503204 CTDSPL2Q05D32 466 aa9.75□□□□□ -0.85
CPNE4-203ENST00000503204 TRIM67Q6ZTA4 783 aa9.75□□□□□ -0.85
CPNE4-203ENST00000503204 NRG2O14511 850 aaPredicted RBP9.74□□□□□ -0.85
CPNE4-203ENST00000503204 TMEM259Q4ZIN3 620 aa9.74□□□□□ -0.85
CPNE4-203ENST00000503204 PKD2L1Q9P0L9 805 aa9.74□□□□□ -0.85
CPNE4-203ENST00000503204 MAP10Q9P2G4 905 aa9.74□□□□□ -0.85
CPNE4-203ENST00000503204 WNT7AO00755 349 aa9.73□□□□□ -0.85
CPNE4-203ENST00000503204 FOXC1Q12948 553 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms