RNA–Protein interactions for RNA: ENST00000503080.1

UBE2B-203, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-203ENST00000503080 MSS51Q4VC12 460 aa9.96□□□□□ -0.82
UBE2B-203ENST00000503080 GPBP1L1Q9HC44 474 aaPredicted RBP9.96□□□□□ -0.82
UBE2B-203ENST00000503080 V9GY48 417 aaPredicted RBP9.96□□□□□ -0.82
UBE2B-203ENST00000503080 C6orf229H3BNL8 230 aa9.93□□□□□ -0.82
UBE2B-203ENST00000503080 SLC19A1P41440 591 aa9.93□□□□□ -0.82
UBE2B-203ENST00000503080 PLA2G2CQ5R387 149 aa9.93□□□□□ -0.82
UBE2B-203ENST00000503080 EMID1Q96A84 441 aaPredicted RBP9.93□□□□□ -0.82
UBE2B-203ENST00000503080 KDM4CQ9H3R0 1056 aa9.93□□□□□ -0.82
UBE2B-203ENST00000503080 FCF1Q9Y324 198 aaKnown RBP9.93□□□□□ -0.82
UBE2B-203ENST00000503080 MMP16P51512 607 aa9.91□□□□□ -0.82
UBE2B-203ENST00000503080 RSBN1LQ6PCB5 846 aaPredicted RBP9.91□□□□□ -0.82
UBE2B-203ENST00000503080 LIAT1Q6ZQX7 453 aa9.91□□□□□ -0.82
UBE2B-203ENST00000503080 RETREG3Q86VR2 466 aa9.91□□□□□ -0.82
UBE2B-203ENST00000503080 IRX2Q9BZI1 471 aaPredicted RBP9.91□□□□□ -0.82
UBE2B-203ENST00000503080 GJA5P36382 358 aa9.9□□□□□ -0.82
UBE2B-203ENST00000503080 MYSM1Q5VVJ2 828 aa9.9□□□□□ -0.82
UBE2B-203ENST00000503080 RIC3Q7Z5B4 369 aa9.9□□□□□ -0.82
UBE2B-203ENST00000503080 SPTLC1O15269 473 aa9.89□□□□□ -0.83
UBE2B-203ENST00000503080 DXOO77932 396 aaKnown RBP9.89□□□□□ -0.83
UBE2B-203ENST00000503080 SPRYD7Q5W111 196 aa9.89□□□□□ -0.83
UBE2B-203ENST00000503080 PCDHB15Q9Y5E8 787 aa9.89□□□□□ -0.83
UBE2B-203ENST00000503080 MTMR2Q13614 643 aa9.88□□□□□ -0.83
UBE2B-203ENST00000503080 FAM117AQ9C073 453 aa9.88□□□□□ -0.83
UBE2B-203ENST00000503080 JUNDP17535 347 aa9.86□□□□□ -0.83
UBE2B-203ENST00000503080 CSPP1Q1MSJ5 1256 aa9.86□□□□□ -0.83
UBE2B-203ENST00000503080 RSPH6AQ9H0K4 717 aa9.86□□□□□ -0.83
UBE2B-203ENST00000503080 LIMD1Q9UGP4 676 aa9.86□□□□□ -0.83
UBE2B-203ENST00000503080 SPDYE5A6NIY4 337 aa9.85□□□□□ -0.83
UBE2B-203ENST00000503080 ZNF598Q86UK7 904 aaKnown RBP9.85□□□□□ -0.83
UBE2B-203ENST00000503080 PRR7Q8TB68 274 aa9.85□□□□□ -0.83
UBE2B-203ENST00000503080 DDRGK1Q96HY6 314 aa9.85□□□□□ -0.83
UBE2B-203ENST00000503080 GFRA3O60609 400 aa9.84□□□□□ -0.83
UBE2B-203ENST00000503080 HRCP23327 699 aa9.84□□□□□ -0.83
UBE2B-203ENST00000503080 RPIAP49247 311 aa9.84□□□□□ -0.83
UBE2B-203ENST00000503080 NEUROD2Q15784 382 aa9.84□□□□□ -0.83
UBE2B-203ENST00000503080 CCDC24Q8N4L8 307 aa9.84□□□□□ -0.83
UBE2B-203ENST00000503080 ZBTB3Q9H5J0 574 aa9.84□□□□□ -0.83
UBE2B-203ENST00000503080 POLR3EQ9NVU0 708 aa9.84□□□□□ -0.83
UBE2B-203ENST00000503080 ZBTB24O43167 697 aaPredicted RBP9.83□□□□□ -0.84
UBE2B-203ENST00000503080 ZNF697Q5TEC3 545 aa9.83□□□□□ -0.84
UBE2B-203ENST00000503080 CABLES1Q8TDN4 633 aa9.83□□□□□ -0.84
UBE2B-203ENST00000503080 CD2BP2O95400 341 aaKnown RBP9.82□□□□□ -0.84
UBE2B-203ENST00000503080 CLK2P49760 499 aaKnown RBP9.82□□□□□ -0.84
UBE2B-203ENST00000503080 QPCTQ16769 361 aa9.82□□□□□ -0.84
UBE2B-203ENST00000503080 PRPF38BQ5VTL8 546 aaKnown RBP9.82□□□□□ -0.84
UBE2B-203ENST00000503080 PLEKHG3A1L390 1219 aa9.81□□□□□ -0.84
UBE2B-203ENST00000503080 NUTM2BA6NNL0 878 aaPredicted RBP9.81□□□□□ -0.84
UBE2B-203ENST00000503080 NUTM2EB1AL46 878 aaPredicted RBP9.81□□□□□ -0.84
UBE2B-203ENST00000503080 TUSC1Q2TAM9 212 aa9.81□□□□□ -0.84
UBE2B-203ENST00000503080 NUTM2DQ5VT03 806 aaPredicted RBP9.81□□□□□ -0.84
UBE2B-203ENST00000503080 NUTM2AQ8IVF1 878 aaPredicted RBP9.81□□□□□ -0.84
UBE2B-203ENST00000503080 NUDT12Q9BQG2 462 aa9.81□□□□□ -0.84
UBE2B-203ENST00000503080 PDZRN3Q9UPQ7 1066 aa9.81□□□□□ -0.84
UBE2B-203ENST00000503080 CFAP99D6REC4 459 aa9.8□□□□□ -0.84
UBE2B-203ENST00000503080 TRIM67Q6ZTA4 783 aa9.8□□□□□ -0.84
UBE2B-203ENST00000503080 PRKCSHP14314 528 aaPredicted RBP9.79□□□□□ -0.84
UBE2B-203ENST00000503080 BRPF1P55201 1214 aaPredicted RBP9.79□□□□□ -0.84
UBE2B-203ENST00000503080 LAPTM4AQ15012 233 aa9.79□□□□□ -0.84
UBE2B-203ENST00000503080 DESI1Q6ICB0 168 aa9.79□□□□□ -0.84
UBE2B-203ENST00000503080 LILRB3O75022 631 aa9.78□□□□□ -0.84
UBE2B-203ENST00000503080 SKIV2LQ15477 1246 aaKnown RBP9.78□□□□□ -0.84
UBE2B-203ENST00000503080 SH3D19Q5HYK7 790 aa9.78□□□□□ -0.84
UBE2B-203ENST00000503080 NRG2O14511 850 aaPredicted RBP9.77□□□□□ -0.85
UBE2B-203ENST00000503080 CCNYL3P0C7X3 344 aa9.77□□□□□ -0.85
UBE2B-203ENST00000503080 TRIM32Q13049 653 aa9.77□□□□□ -0.85
UBE2B-203ENST00000503080 PTPRNQ16849 979 aa9.77□□□□□ -0.85
UBE2B-203ENST00000503080 ATP1B4Q9UN42 357 aaPredicted RBP9.77□□□□□ -0.85
UBE2B-203ENST00000503080 TNFRSF10AO00220 468 aa9.76□□□□□ -0.85
UBE2B-203ENST00000503080 GDF9O60383 454 aa9.76□□□□□ -0.85
UBE2B-203ENST00000503080 FOXC1Q12948 553 aa9.76□□□□□ -0.85
UBE2B-203ENST00000503080 PTCRAQ6ISU1 281 aaPredicted RBP9.76□□□□□ -0.85
UBE2B-203ENST00000503080 PROCA1Q8NCQ7 364 aaPredicted RBP9.76□□□□□ -0.85
UBE2B-203ENST00000503080 IL27Q8NEV9 243 aa9.76□□□□□ -0.85
UBE2B-203ENST00000503080 TSC1Q92574 1164 aa9.76□□□□□ -0.85
UBE2B-203ENST00000503080 RTL5Q5HYW3 569 aaPredicted RBP9.75□□□□□ -0.85
UBE2B-203ENST00000503080 Q6ZNB5 142 aa9.75□□□□□ -0.85
UBE2B-203ENST00000503080 EVA1BQ9NVM1 165 aa9.75□□□□□ -0.85
UBE2B-203ENST00000503080 PRR20EP86478 221 aa9.74□□□□□ -0.85
UBE2B-203ENST00000503080 PRR20CP86479 221 aa9.74□□□□□ -0.85
UBE2B-203ENST00000503080 PRR20DP86480 221 aa9.74□□□□□ -0.85
UBE2B-203ENST00000503080 PRR20BP86481 221 aa9.74□□□□□ -0.85
UBE2B-203ENST00000503080 PRR20AP86496 221 aa9.74□□□□□ -0.85
UBE2B-203ENST00000503080 LYPD8Q6UX82 237 aa9.74□□□□□ -0.85
UBE2B-203ENST00000503080 PKD2L1Q9P0L9 805 aa9.74□□□□□ -0.85
UBE2B-203ENST00000503080 KCNH2Q12809 1159 aa9.72□□□□□ -0.85
UBE2B-203ENST00000503080 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.72□□□□□ -0.85
UBE2B-203ENST00000503080 PER1O15534 1290 aaPredicted RBP9.71□□□□□ -0.86
UBE2B-203ENST00000503080 CTHP32929 405 aa9.71□□□□□ -0.86
UBE2B-203ENST00000503080 HELBQ8NG08 1087 aaPredicted RBP9.71□□□□□ -0.86
UBE2B-203ENST00000503080 UNC93B1Q9H1C4 597 aa9.71□□□□□ -0.86
UBE2B-203ENST00000503080 FBXO31Q5XUX0 539 aaPredicted RBP9.7□□□□□ -0.86
UBE2B-203ENST00000503080 SKOR1P84550 965 aa9.69□□□□□ -0.86
UBE2B-203ENST00000503080 WNT7AO00755 349 aa9.68□□□□□ -0.86
UBE2B-203ENST00000503080 WNT7BP56706 349 aa9.68□□□□□ -0.86
UBE2B-203ENST00000503080 GOPCQ9HD26 462 aa9.68□□□□□ -0.86
UBE2B-203ENST00000503080 MAP10Q9P2G4 905 aa9.68□□□□□ -0.86
UBE2B-203ENST00000503080 F12P00748 615 aaPredicted RBP9.67□□□□□ -0.86
UBE2B-203ENST00000503080 CTDSPL2Q05D32 466 aa9.67□□□□□ -0.86
UBE2B-203ENST00000503080 RC3H1Q5TC82 1133 aaKnown RBP9.67□□□□□ -0.86
UBE2B-203ENST00000503080 PPP2R2DQ66LE6 453 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms