RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 CSPP1Q1MSJ5 1256 aa9.34□□□□□ -0.91
RFC1-205ENST00000502991 PLA2G2CQ5R387 149 aa9.34□□□□□ -0.91
RFC1-205ENST00000502991 EMID1Q96A84 441 aaPredicted RBP9.34□□□□□ -0.91
RFC1-205ENST00000502991 USB1Q9BQ65 265 aaKnown RBP9.34□□□□□ -0.91
RFC1-205ENST00000502991 PCDHB15Q9Y5E8 787 aa9.34□□□□□ -0.91
RFC1-205ENST00000502991 C6orf229H3BNL8 230 aa9.33□□□□□ -0.92
RFC1-205ENST00000502991 NEUROD2Q15784 382 aa9.33□□□□□ -0.92
RFC1-205ENST00000502991 MYSM1Q5VVJ2 828 aa9.33□□□□□ -0.92
RFC1-205ENST00000502991 RSBN1LQ6PCB5 846 aaPredicted RBP9.32□□□□□ -0.92
RFC1-205ENST00000502991 LIMD1Q9UGP4 676 aa9.32□□□□□ -0.92
RFC1-205ENST00000502991 FCF1Q9Y324 198 aaKnown RBP9.32□□□□□ -0.92
RFC1-205ENST00000502991 RIC3Q7Z5B4 369 aa9.31□□□□□ -0.92
RFC1-205ENST00000502991 ANKLE1Q8NAG6 615 aa9.31□□□□□ -0.92
RFC1-205ENST00000502991 POLR3EQ9NVU0 708 aa9.31□□□□□ -0.92
RFC1-205ENST00000502991 PLEKHG3A1L390 1219 aa9.3□□□□□ -0.92
RFC1-205ENST00000502991 SPTLC1O15269 473 aa9.3□□□□□ -0.92
RFC1-205ENST00000502991 RGS20O76081 388 aa9.3□□□□□ -0.92
RFC1-205ENST00000502991 BRPF1P55201 1214 aaPredicted RBP9.3□□□□□ -0.92
RFC1-205ENST00000502991 MSS51Q4VC12 460 aa9.3□□□□□ -0.92
RFC1-205ENST00000502991 LIAT1Q6ZQX7 453 aa9.3□□□□□ -0.92
RFC1-205ENST00000502991 CABLES1Q8TDN4 633 aa9.3□□□□□ -0.92
RFC1-205ENST00000502991 SLC19A1P41440 591 aa9.28□□□□□ -0.92
RFC1-205ENST00000502991 DIXDC1Q155Q3 683 aa9.28□□□□□ -0.92
RFC1-205ENST00000502991 QPCTQ16769 361 aa9.28□□□□□ -0.92
RFC1-205ENST00000502991 RETREG3Q86VR2 466 aa9.28□□□□□ -0.92
RFC1-205ENST00000502991 DXOO77932 396 aaKnown RBP9.26□□□□□ -0.93
RFC1-205ENST00000502991 HRCP23327 699 aa9.26□□□□□ -0.93
RFC1-205ENST00000502991 MMP16P51512 607 aa9.26□□□□□ -0.93
RFC1-205ENST00000502991 MTMR2Q13614 643 aa9.26□□□□□ -0.93
RFC1-205ENST00000502991 IL27Q8NEV9 243 aa9.26□□□□□ -0.93
RFC1-205ENST00000502991 CCDC24Q8N4L8 307 aa9.25□□□□□ -0.93
RFC1-205ENST00000502991 PRR7Q8TB68 274 aa9.25□□□□□ -0.93
RFC1-205ENST00000502991 DDRGK1Q96HY6 314 aa9.25□□□□□ -0.93
RFC1-205ENST00000502991 V9GY48 417 aaPredicted RBP9.25□□□□□ -0.93
RFC1-205ENST00000502991 CFAP99D6REC4 459 aa9.24□□□□□ -0.93
RFC1-205ENST00000502991 JUNDP17535 347 aa9.24□□□□□ -0.93
RFC1-205ENST00000502991 CLK2P49760 499 aaKnown RBP9.24□□□□□ -0.93
RFC1-205ENST00000502991 PROCA1Q8NCQ7 364 aaPredicted RBP9.24□□□□□ -0.93
RFC1-205ENST00000502991 GJA5P36382 358 aa9.23□□□□□ -0.93
RFC1-205ENST00000502991 SPRYD7Q5W111 196 aa9.23□□□□□ -0.93
RFC1-205ENST00000502991 FBXO31Q5XUX0 539 aaPredicted RBP9.23□□□□□ -0.93
RFC1-205ENST00000502991 RSPH6AQ9H0K4 717 aa9.23□□□□□ -0.93
RFC1-205ENST00000502991 ZBTB3Q9H5J0 574 aa9.23□□□□□ -0.93
RFC1-205ENST00000502991 NUTM2BA6NNL0 878 aaPredicted RBP9.22□□□□□ -0.93
RFC1-205ENST00000502991 NUTM2EB1AL46 878 aaPredicted RBP9.22□□□□□ -0.93
RFC1-205ENST00000502991 RTL5Q5HYW3 569 aaPredicted RBP9.22□□□□□ -0.93
RFC1-205ENST00000502991 NUTM2DQ5VT03 806 aaPredicted RBP9.22□□□□□ -0.93
RFC1-205ENST00000502991 NUTM2AQ8IVF1 878 aaPredicted RBP9.22□□□□□ -0.93
RFC1-205ENST00000502991 ATP1B4Q9UN42 357 aaPredicted RBP9.22□□□□□ -0.93
RFC1-205ENST00000502991 TSC1Q92574 1164 aa9.21□□□□□ -0.94
RFC1-205ENST00000502991 IRX2Q9BZI1 471 aaPredicted RBP9.21□□□□□ -0.94
RFC1-205ENST00000502991 SH3D19Q5HYK7 790 aa9.2□□□□□ -0.94
RFC1-205ENST00000502991 NUDT12Q9BQG2 462 aa9.2□□□□□ -0.94
RFC1-205ENST00000502991 LILRB3O75022 631 aa9.19□□□□□ -0.94
RFC1-205ENST00000502991 SKIV2LQ15477 1246 aaKnown RBP9.19□□□□□ -0.94
RFC1-205ENST00000502991 ZNF697Q5TEC3 545 aa9.19□□□□□ -0.94
RFC1-205ENST00000502991 PTCRAQ6ISU1 281 aaPredicted RBP9.19□□□□□ -0.94
RFC1-205ENST00000502991 SPDYE5A6NIY4 337 aa9.18□□□□□ -0.94
RFC1-205ENST00000502991 PRPF38BQ5VTL8 546 aaKnown RBP9.18□□□□□ -0.94
RFC1-205ENST00000502991 TRIM67Q6ZTA4 783 aa9.18□□□□□ -0.94
RFC1-205ENST00000502991 ZNF598Q86UK7 904 aaKnown RBP9.18□□□□□ -0.94
RFC1-205ENST00000502991 TNFRSF10AO00220 468 aa9.17□□□□□ -0.94
RFC1-205ENST00000502991 PER1O15534 1290 aaPredicted RBP9.17□□□□□ -0.94
RFC1-205ENST00000502991 GFRA3O60609 400 aa9.17□□□□□ -0.94
RFC1-205ENST00000502991 ZBTB24O43167 697 aaPredicted RBP9.16□□□□□ -0.94
RFC1-205ENST00000502991 FOXC1Q12948 553 aa9.16□□□□□ -0.94
RFC1-205ENST00000502991 TUSC1Q2TAM9 212 aa9.16□□□□□ -0.94
RFC1-205ENST00000502991 PDZRN3Q9UPQ7 1066 aa9.16□□□□□ -0.94
RFC1-205ENST00000502991 CCNYL3P0C7X3 344 aa9.15□□□□□ -0.94
RFC1-205ENST00000502991 RPIAP49247 311 aa9.15□□□□□ -0.94
RFC1-205ENST00000502991 TRIM32Q13049 653 aa9.15□□□□□ -0.94
RFC1-205ENST00000502991 CD2BP2O95400 341 aaKnown RBP9.14□□□□□ -0.95
RFC1-205ENST00000502991 PTPRNQ16849 979 aa9.14□□□□□ -0.95
RFC1-205ENST00000502991 LYPD8Q6UX82 237 aa9.14□□□□□ -0.95
RFC1-205ENST00000502991 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.14□□□□□ -0.95
RFC1-205ENST00000502991 DESI1Q6ICB0 168 aa9.13□□□□□ -0.95
RFC1-205ENST00000502991 PKD2L1Q9P0L9 805 aa9.13□□□□□ -0.95
RFC1-205ENST00000502991 MAP10Q9P2G4 905 aa9.13□□□□□ -0.95
RFC1-205ENST00000502991 CTHP32929 405 aa9.12□□□□□ -0.95
RFC1-205ENST00000502991 EVA1BQ9NVM1 165 aa9.12□□□□□ -0.95
RFC1-205ENST00000502991 GDF9O60383 454 aa9.11□□□□□ -0.95
RFC1-205ENST00000502991 SKOR1P84550 965 aa9.11□□□□□ -0.95
RFC1-205ENST00000502991 CTDSPL2Q05D32 466 aa9.11□□□□□ -0.95
RFC1-205ENST00000502991 LINC01559Q495D7 138 aa9.11□□□□□ -0.95
RFC1-205ENST00000502991 KCNH2Q12809 1159 aa9.1□□□□□ -0.95
RFC1-205ENST00000502991 UNC93B1Q9H1C4 597 aa9.1□□□□□ -0.95
RFC1-205ENST00000502991 HELBQ8NG08 1087 aaPredicted RBP9.09□□□□□ -0.95
RFC1-205ENST00000502991 PCMTD1Q96MG8 357 aaPredicted RBP9.09□□□□□ -0.95
RFC1-205ENST00000502991 AP1G2O75843 785 aa9.08□□□□□ -0.96
RFC1-205ENST00000502991 F12P00748 615 aaPredicted RBP9.08□□□□□ -0.96
RFC1-205ENST00000502991 Q6ZNB5 142 aa9.08□□□□□ -0.96
RFC1-205ENST00000502991 LRRN4Q8WUT4 740 aa9.08□□□□□ -0.96
RFC1-205ENST00000502991 BAP1Q92560 729 aa9.08□□□□□ -0.96
RFC1-205ENST00000502991 NRG2O14511 850 aaPredicted RBP9.07□□□□□ -0.96
RFC1-205ENST00000502991 PPP2R2DQ66LE6 453 aa9.07□□□□□ -0.96
RFC1-205ENST00000502991 SH3BP2P78314 561 aa9.06□□□□□ -0.96
RFC1-205ENST00000502991 RC3H1Q5TC82 1133 aaKnown RBP9.06□□□□□ -0.96
RFC1-205ENST00000502991 GOPCQ9HD26 462 aa9.06□□□□□ -0.96
RFC1-205ENST00000502991 LCE2BO14633 110 aa9.05□□□□□ -0.96
RFC1-205ENST00000502991 RFC5P40937 340 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms