RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 LRRC59Q96AG4 307 aaKnown RBP15.97■□□□□ 0.15
SNCA-207ENST00000502987 SHPRHQ149N8 1683 aa15.97■□□□□ 0.15
SNCA-207ENST00000502987 ASXL1Q8IXJ9 1541 aa15.97■□□□□ 0.15
SNCA-207ENST00000502987 NALCNQ8IZF0 1738 aa15.97■□□□□ 0.15
SNCA-207ENST00000502987 PPLO60437 1756 aa15.96■□□□□ 0.15
SNCA-207ENST00000502987 ZNF772Q68DY9 489 aaPredicted RBP15.96■□□□□ 0.15
SNCA-207ENST00000502987 DDX17Q92841 729 aaKnown RBP15.96■□□□□ 0.15
SNCA-207ENST00000502987 MPHOSPH9Q99550 1183 aa15.96■□□□□ 0.15
SNCA-207ENST00000502987 CCDC144AA2RUR9 1427 aa15.94■□□□□ 0.14
SNCA-207ENST00000502987 LRP6O75581 1613 aa15.94■□□□□ 0.14
SNCA-207ENST00000502987 STK26Q9P289 416 aa15.93■□□□□ 0.14
SNCA-207ENST00000502987 NHSL1Q5SYE7 1610 aa15.93■□□□□ 0.14
SNCA-207ENST00000502987 ROBO2Q9HCK4 1378 aa15.92■□□□□ 0.14
SNCA-207ENST00000502987 SETD1AO15047 1707 aaKnown RBP15.92■□□□□ 0.14
SNCA-207ENST00000502987 SETD5Q9C0A6 1442 aa15.91■□□□□ 0.14
SNCA-207ENST00000502987 ADGRF5Q8IZF2 1346 aa15.91■□□□□ 0.14
SNCA-207ENST00000502987 RXRBP28702 533 aa15.9■□□□□ 0.14
SNCA-207ENST00000502987 CHRDL2Q6WN34 429 aa15.9■□□□□ 0.14
SNCA-207ENST00000502987 ORAI2Q96SN7 254 aa15.9■□□□□ 0.14
SNCA-207ENST00000502987 PTCH1Q13635 1447 aa15.9■□□□□ 0.14
SNCA-207ENST00000502987 AFF2P51816 1311 aa15.9■□□□□ 0.14
SNCA-207ENST00000502987 C1orf167Q5SNV9 1468 aa15.9■□□□□ 0.14
SNCA-207ENST00000502987 ZBTB22O15209 634 aa15.89■□□□□ 0.13
SNCA-207ENST00000502987 C8orf37Q96NL8 207 aa15.89■□□□□ 0.13
SNCA-207ENST00000502987 ACIN1Q9UKV3 1341 aaKnown RBP15.88■□□□□ 0.13
SNCA-207ENST00000502987 ADAMTS2O95450 1211 aa15.87■□□□□ 0.13
SNCA-207ENST00000502987 ESCO1Q5FWF5 840 aa15.87■□□□□ 0.13
SNCA-207ENST00000502987 TMEM132EQ6IEE7 984 aa15.87■□□□□ 0.13
SNCA-207ENST00000502987 ANKRD30BQ9BXX2 1392 aa15.87■□□□□ 0.13
SNCA-207ENST00000502987 NUTM2FA1L443 756 aa15.86■□□□□ 0.13
SNCA-207ENST00000502987 WAPLQ7Z5K2 1190 aa15.86■□□□□ 0.13
SNCA-207ENST00000502987 NGLY1Q96IV0 654 aa15.86■□□□□ 0.13
SNCA-207ENST00000502987 PNPLA6Q8IY17 1366 aa15.86■□□□□ 0.13
SNCA-207ENST00000502987 QTRT2Q9H974 415 aaKnown RBP15.84■□□□□ 0.13
SNCA-207ENST00000502987 SPATA31E1Q6ZUB1 1445 aa15.84■□□□□ 0.13
SNCA-207ENST00000502987 IFT172Q9UG01 1749 aa15.83■□□□□ 0.13
SNCA-207ENST00000502987 ZBTB12Q9Y330 459 aaPredicted RBP15.82■□□□□ 0.12
SNCA-207ENST00000502987 SOS2Q07890 1332 aaPredicted RBP15.82■□□□□ 0.12
SNCA-207ENST00000502987 FOXO3O43524 673 aa15.81■□□□□ 0.12
SNCA-207ENST00000502987 LRPPRCP42704 1394 aaKnown RBP15.81■□□□□ 0.12
SNCA-207ENST00000502987 XPCQ01831 940 aaPredicted RBP15.81■□□□□ 0.12
SNCA-207ENST00000502987 NPHP3Q7Z494 1330 aa15.81■□□□□ 0.12
SNCA-207ENST00000502987 PRAG1Q86YV5 1406 aa15.81■□□□□ 0.12
SNCA-207ENST00000502987 ABCC11Q96J66 1382 aa15.79■□□□□ 0.12
SNCA-207ENST00000502987 RBM6P78332 1123 aaKnown RBP15.79■□□□□ 0.12
SNCA-207ENST00000502987 UPF1Q92900 1129 aaKnown RBP eCLIP15.79■□□□□ 0.12
SNCA-207ENST00000502987 LAMC1P11047 1609 aa15.79■□□□□ 0.12
SNCA-207ENST00000502987 CDC42BPGQ6DT37 1551 aa15.79■□□□□ 0.12
SNCA-207ENST00000502987 RAB3GAP2Q9H2M9 1393 aa15.78■□□□□ 0.12
SNCA-207ENST00000502987 CFAP70Q5T0N1 1121 aa15.78■□□□□ 0.12
SNCA-207ENST00000502987 USP21Q9UK80 565 aa15.78■□□□□ 0.12
SNCA-207ENST00000502987 PIK3C2GO75747 1445 aa15.77■□□□□ 0.12
SNCA-207ENST00000502987 YTHDC2Q9H6S0 1430 aaKnown RBP15.77■□□□□ 0.12
SNCA-207ENST00000502987 DHX57Q6P158 1386 aaKnown RBP15.77■□□□□ 0.12
SNCA-207ENST00000502987 PLEKHH1Q9ULM0 1364 aa15.77■□□□□ 0.12
SNCA-207ENST00000502987 SAFB2Q14151 953 aaKnown RBP eCLIP15.77■□□□□ 0.12
SNCA-207ENST00000502987 C14orf93Q9H972 538 aaKnown RBP15.77■□□□□ 0.12
SNCA-207ENST00000502987 KNDC1Q76NI1 1749 aa15.76■□□□□ 0.11
SNCA-207ENST00000502987 TECPR2O15040 1411 aa15.76■□□□□ 0.11
SNCA-207ENST00000502987 AKT1S1Q96B36 256 aa15.75■□□□□ 0.11
SNCA-207ENST00000502987 POGKQ9P215 609 aa15.75■□□□□ 0.11
SNCA-207ENST00000502987 KDM2AQ9Y2K7 1162 aa15.75■□□□□ 0.11
SNCA-207ENST00000502987 CDK12Q9NYV4 1490 aaPredicted RBP15.75■□□□□ 0.11
SNCA-207ENST00000502987 RGPD8O14715 1765 aaPredicted RBP15.73■□□□□ 0.11
SNCA-207ENST00000502987 PLEKHG5O94827 1062 aa15.73■□□□□ 0.11
SNCA-207ENST00000502987 KRT28Q7Z3Y7 464 aa15.73■□□□□ 0.11
SNCA-207ENST00000502987 SIRT1Q96EB6 747 aa15.73■□□□□ 0.11
SNCA-207ENST00000502987 PRAM1Q96QH2 718 aa15.73■□□□□ 0.11
SNCA-207ENST00000502987 TRPC5Q9UL62 973 aaPredicted RBP15.73■□□□□ 0.11
SNCA-207ENST00000502987 FMN2Q9NZ56 1722 aa15.73■□□□□ 0.11
SNCA-207ENST00000502987 HAP1P54257 671 aaPredicted RBP15.72■□□□□ 0.11
SNCA-207ENST00000502987 LMOD2Q6P5Q4 547 aa15.71■□□□□ 0.11
SNCA-207ENST00000502987 DCAF11Q8TEB1 546 aa15.71■□□□□ 0.11
SNCA-207ENST00000502987 PHF8Q9UPP1 1060 aa15.71■□□□□ 0.11
SNCA-207ENST00000502987 COL22A1Q8NFW1 1626 aaPredicted RBP15.71■□□□□ 0.11
SNCA-207ENST00000502987 PXDNQ92626 1479 aa15.71■□□□□ 0.1
SNCA-207ENST00000502987 RGS12O14924 1447 aa15.7■□□□□ 0.1
SNCA-207ENST00000502987 PSME1Q06323 249 aa15.7■□□□□ 0.1
SNCA-207ENST00000502987 FNBP4Q8N3X1 1017 aaPredicted RBP15.7■□□□□ 0.1
SNCA-207ENST00000502987 TRAK1Q9UPV9 953 aa15.7■□□□□ 0.1
SNCA-207ENST00000502987 MYOM2P54296 1465 aa15.7■□□□□ 0.1
SNCA-207ENST00000502987 MARF1Q9Y4F3 1742 aaKnown RBP15.69■□□□□ 0.1
SNCA-207ENST00000502987 KIF1AQ12756 1690 aa15.69■□□□□ 0.1
SNCA-207ENST00000502987 SPATA31A3Q5VYP0 1347 aa15.68■□□□□ 0.1
SNCA-207ENST00000502987 NRXN1Q9ULB1 1477 aa15.67■□□□□ 0.1
SNCA-207ENST00000502987 PMFBP1Q8TBY8 1022 aa15.67■□□□□ 0.1
SNCA-207ENST00000502987 HIRIP3Q9BW71 556 aaPredicted RBP15.67■□□□□ 0.1
SNCA-207ENST00000502987 MINK1Q8N4C8 1332 aaPredicted RBP15.66■□□□□ 0.1
SNCA-207ENST00000502987 ATAD2Q6PL18 1390 aa15.64■□□□□ 0.09
SNCA-207ENST00000502987 ATRNO75882 1429 aa15.64■□□□□ 0.09
SNCA-207ENST00000502987 CABLES1Q8TDN4 633 aa15.64■□□□□ 0.09
SNCA-207ENST00000502987 HRCP23327 699 aa15.63■□□□□ 0.09
SNCA-207ENST00000502987 REM2Q8IYK8 340 aaPredicted RBP15.63■□□□□ 0.09
SNCA-207ENST00000502987 GJD4Q96KN9 370 aaPredicted RBP15.63■□□□□ 0.09
SNCA-207ENST00000502987 UNC5CLQ8IV45 518 aa15.62■□□□□ 0.09
SNCA-207ENST00000502987 STAC3Q96MF2 364 aa15.62■□□□□ 0.09
SNCA-207ENST00000502987 CCDC9Q9Y3X0 531 aaKnown RBP15.62■□□□□ 0.09
SNCA-207ENST00000502987 BCL9LQ86UU0 1499 aa15.62■□□□□ 0.09
SNCA-207ENST00000502987 DLC1Q96QB1 1528 aa15.62■□□□□ 0.09
SNCA-207ENST00000502987 TNS3Q68CZ2 1445 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms