RNA–Protein interactions for RNA: ENST00000502755.5

PRDM9-202, Transcript of PR/SET domain 9, humanhuman

TSL 4

Gene PRDM9, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-202ENST00000502755 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.59■□□□□ 0.25
PRDM9-202ENST00000502755 SAFB2Q14151 953 aaKnown RBP eCLIP16.59■□□□□ 0.25
PRDM9-202ENST00000502755 ADGRL3Q9HAR2 1447 aa16.59■□□□□ 0.25
PRDM9-202ENST00000502755 CENPJQ9HC77 1338 aaPredicted RBP16.58■□□□□ 0.24
PRDM9-202ENST00000502755 ATF3P18847 181 aa16.57■□□□□ 0.24
PRDM9-202ENST00000502755 ZEB1P37275 1124 aaPredicted RBP16.57■□□□□ 0.24
PRDM9-202ENST00000502755 DCCP43146 1447 aa16.56■□□□□ 0.24
PRDM9-202ENST00000502755 TOM1O60784 492 aa16.56■□□□□ 0.24
PRDM9-202ENST00000502755 QRICH2Q9H0J4 1663 aa16.56■□□□□ 0.24
PRDM9-202ENST00000502755 MINK1Q8N4C8 1332 aaPredicted RBP16.55■□□□□ 0.24
PRDM9-202ENST00000502755 CADPS2Q86UW7 1296 aa16.55■□□□□ 0.24
PRDM9-202ENST00000502755 UBAP1LF5GYI3 381 aa16.54■□□□□ 0.24
PRDM9-202ENST00000502755 CDC42BPGQ6DT37 1551 aa16.53■□□□□ 0.24
PRDM9-202ENST00000502755 USP47Q96K76 1375 aa16.52■□□□□ 0.24
PRDM9-202ENST00000502755 ADGRB2O60241 1585 aa16.52■□□□□ 0.24
PRDM9-202ENST00000502755 HIRIP3Q9BW71 556 aaPredicted RBP16.51■□□□□ 0.23
PRDM9-202ENST00000502755 ST20-MTHFSA0A0A6YYL1 179 aa16.5■□□□□ 0.23
PRDM9-202ENST00000502755 EIF4G2P78344 907 aaKnown RBP eCLIP16.5■□□□□ 0.23
PRDM9-202ENST00000502755 SLAIN2Q9P270 581 aa16.5■□□□□ 0.23
PRDM9-202ENST00000502755 FMN2Q9NZ56 1722 aa16.5■□□□□ 0.23
PRDM9-202ENST00000502755 WASLO00401 505 aaPredicted RBP16.49■□□□□ 0.23
PRDM9-202ENST00000502755 SLC24A1O60721 1099 aa16.49■□□□□ 0.23
PRDM9-202ENST00000502755 SBNO2Q9Y2G9 1366 aa16.49■□□□□ 0.23
PRDM9-202ENST00000502755 EVC2Q86UK5 1308 aa16.47■□□□□ 0.23
PRDM9-202ENST00000502755 MST1RQ04912 1400 aa16.47■□□□□ 0.23
PRDM9-202ENST00000502755 CDK19Q9BWU1 502 aa16.47■□□□□ 0.23
PRDM9-202ENST00000502755 RGPD8O14715 1765 aaPredicted RBP16.46■□□□□ 0.23
PRDM9-202ENST00000502755 PIP4K2BP78356 416 aa16.46■□□□□ 0.23
PRDM9-202ENST00000502755 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
PRDM9-202ENST00000502755 NUTM2FA1L443 756 aa16.45■□□□□ 0.22
PRDM9-202ENST00000502755 HSPA5P11021 654 aaKnown RBP16.45■□□□□ 0.22
PRDM9-202ENST00000502755 FBXO41Q8TF61 875 aa16.45■□□□□ 0.22
PRDM9-202ENST00000502755 C1orf167Q5SNV9 1468 aa16.45■□□□□ 0.22
PRDM9-202ENST00000502755 SRPK2P78362 688 aaKnown RBP16.44■□□□□ 0.22
PRDM9-202ENST00000502755 TESK2Q96S53 571 aa16.44■□□□□ 0.22
PRDM9-202ENST00000502755 TULP4Q9NRJ4 1543 aa16.44■□□□□ 0.22
PRDM9-202ENST00000502755 ANKARQ7Z5J8 1434 aa16.44■□□□□ 0.22
PRDM9-202ENST00000502755 ROBO1Q9Y6N7 1651 aa16.43■□□□□ 0.22
PRDM9-202ENST00000502755 ITSN1Q15811 1721 aa16.42■□□□□ 0.22
PRDM9-202ENST00000502755 TMF1P82094 1093 aa16.42■□□□□ 0.22
PRDM9-202ENST00000502755 ESCO1Q5FWF5 840 aa16.42■□□□□ 0.22
PRDM9-202ENST00000502755 USP32Q8NFA0 1604 aa16.41■□□□□ 0.22
PRDM9-202ENST00000502755 NUDT16Q96DE0 195 aaKnown RBP16.41■□□□□ 0.22
PRDM9-202ENST00000502755 CABP2Q9NPB3 220 aa16.41■□□□□ 0.22
PRDM9-202ENST00000502755 BRINP3Q76B58 766 aa16.4■□□□□ 0.22
PRDM9-202ENST00000502755 ORAI2Q96SN7 254 aa16.4■□□□□ 0.22
PRDM9-202ENST00000502755 PRR36Q9H6K5 1346 aa16.4■□□□□ 0.22
PRDM9-202ENST00000502755 CDCA8Q53HL2 280 aa16.39■□□□□ 0.21
PRDM9-202ENST00000502755 PUS7Q96PZ0 661 aaKnown RBP16.39■□□□□ 0.21
PRDM9-202ENST00000502755 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.21
PRDM9-202ENST00000502755 KIF1AQ12756 1690 aa16.39■□□□□ 0.21
PRDM9-202ENST00000502755 ATP7BP35670 1465 aa16.38■□□□□ 0.21
PRDM9-202ENST00000502755 PHF8Q9UPP1 1060 aa16.38■□□□□ 0.21
PRDM9-202ENST00000502755 TOPAZ1Q8N9V7 1692 aa16.37■□□□□ 0.21
PRDM9-202ENST00000502755 ATAD2Q6PL18 1390 aa16.37■□□□□ 0.21
PRDM9-202ENST00000502755 DISP3Q9P2K9 1392 aa16.36■□□□□ 0.21
PRDM9-202ENST00000502755 NHSL1Q5SYE7 1610 aa16.35■□□□□ 0.21
PRDM9-202ENST00000502755 PMFBP1Q8TBY8 1022 aa16.35■□□□□ 0.21
PRDM9-202ENST00000502755 PPIP5K1Q6PFW1 1433 aa16.35■□□□□ 0.21
PRDM9-202ENST00000502755 PHLPP1O60346 1717 aa16.34■□□□□ 0.21
PRDM9-202ENST00000502755 PLEKHG3A1L390 1219 aa16.34■□□□□ 0.21
PRDM9-202ENST00000502755 AHDC1Q5TGY3 1603 aaPredicted RBP16.34■□□□□ 0.21
PRDM9-202ENST00000502755 FOXO3O43524 673 aa16.33■□□□□ 0.2
PRDM9-202ENST00000502755 NGDNQ8NEJ9 315 aaKnown RBP16.33■□□□□ 0.2
PRDM9-202ENST00000502755 CABP1Q9NZU7 370 aa16.33■□□□□ 0.2
PRDM9-202ENST00000502755 NPHP3Q7Z494 1330 aa16.33■□□□□ 0.2
PRDM9-202ENST00000502755 PSME1Q06323 249 aa16.31■□□□□ 0.2
PRDM9-202ENST00000502755 TMC1Q8TDI8 760 aa16.31■□□□□ 0.2
PRDM9-202ENST00000502755 DDX17Q92841 729 aaKnown RBP16.31■□□□□ 0.2
PRDM9-202ENST00000502755 NINLQ9Y2I6 1382 aa16.3■□□□□ 0.2
PRDM9-202ENST00000502755 ACEP12821 1306 aa16.3■□□□□ 0.2
PRDM9-202ENST00000502755 HSPA1LP34931 641 aa16.3■□□□□ 0.2
PRDM9-202ENST00000502755 POLR3AO14802 1390 aaPredicted RBP16.29■□□□□ 0.2
PRDM9-202ENST00000502755 KRT28Q7Z3Y7 464 aa16.29■□□□□ 0.2
PRDM9-202ENST00000502755 POLR3GLQ9BT43 218 aa16.29■□□□□ 0.2
PRDM9-202ENST00000502755 SOS2Q07890 1332 aaPredicted RBP16.28■□□□□ 0.2
PRDM9-202ENST00000502755 ILDR1Q86SU0 546 aaPredicted RBP16.28■□□□□ 0.2
PRDM9-202ENST00000502755 ZNF692Q9BU19 519 aaPredicted RBP16.28■□□□□ 0.2
PRDM9-202ENST00000502755 AKAP12Q02952 1782 aa16.28■□□□□ 0.2
PRDM9-202ENST00000502755 COL16A1Q07092 1604 aaPredicted RBP16.27■□□□□ 0.2
PRDM9-202ENST00000502755 C11orf95C9JLR9 678 aaPredicted RBP16.27■□□□□ 0.2
PRDM9-202ENST00000502755 XPCQ01831 940 aaPredicted RBP16.27■□□□□ 0.2
PRDM9-202ENST00000502755 LRRC59Q96AG4 307 aaKnown RBP16.27■□□□□ 0.2
PRDM9-202ENST00000502755 SLC12A5Q9H2X9 1139 aa16.27■□□□□ 0.2
PRDM9-202ENST00000502755 TERF2IPQ9NYB0 399 aa16.27■□□□□ 0.2
PRDM9-202ENST00000502755 PXDNQ92626 1479 aa16.27■□□□□ 0.19
PRDM9-202ENST00000502755 HDGFL2Q7Z4V5 671 aaPredicted RBP16.26■□□□□ 0.19
PRDM9-202ENST00000502755 MYOM1P52179 1685 aa16.24■□□□□ 0.19
PRDM9-202ENST00000502755 KIF7Q2M1P5 1343 aa16.24■□□□□ 0.19
PRDM9-202ENST00000502755 CPSF1Q10570 1443 aaKnown RBP16.24■□□□□ 0.19
PRDM9-202ENST00000502755 SBNO1A3KN83 1393 aa16.24■□□□□ 0.19
PRDM9-202ENST00000502755 BRD4O60885 1362 aaPredicted RBP16.24■□□□□ 0.19
PRDM9-202ENST00000502755 KTN1Q86UP2 1357 aaKnown RBP16.24■□□□□ 0.19
PRDM9-202ENST00000502755 TRPM3Q9HCF6 1732 aaPredicted RBP16.23■□□□□ 0.19
PRDM9-202ENST00000502755 PAK3O75914 559 aaPredicted RBP16.23■□□□□ 0.19
PRDM9-202ENST00000502755 CD163L1Q9NR16 1453 aa16.22■□□□□ 0.19
PRDM9-202ENST00000502755 MON2Q7Z3U7 1717 aa16.22■□□□□ 0.19
PRDM9-202ENST00000502755 USP6P35125 1406 aa16.22■□□□□ 0.19
PRDM9-202ENST00000502755 ANKRD36BQ8N2N9 1353 aa16.22■□□□□ 0.19
PRDM9-202ENST00000502755 CCDC7Q96M83 1385 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms