RNA–Protein interactions for RNA: ENST00000502660.5

CSF1R-202, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 2

Gene CSF1R, Length 1,388 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-202ENST00000502660 SAFB2Q14151 953 aaKnown RBP eCLIP22.49■■□□□ 1.19
CSF1R-202ENST00000502660 WAPLQ7Z5K2 1190 aa22.48■■□□□ 1.19
CSF1R-202ENST00000502660 CPS1P31327 1500 aa22.47■■□□□ 1.19
CSF1R-202ENST00000502660 MINK1Q8N4C8 1332 aaPredicted RBP22.46■■□□□ 1.19
CSF1R-202ENST00000502660 PER1O15534 1290 aaPredicted RBP22.46■■□□□ 1.19
CSF1R-202ENST00000502660 PRKRIP1Q9H875 184 aaPredicted RBP22.46■■□□□ 1.19
CSF1R-202ENST00000502660 AMOTL2Q9Y2J4 779 aa22.45■■□□□ 1.18
CSF1R-202ENST00000502660 TULP4Q9NRJ4 1543 aa22.44■■□□□ 1.18
CSF1R-202ENST00000502660 PTPRUQ92729 1446 aa22.44■■□□□ 1.18
CSF1R-202ENST00000502660 CERKQ8TCT0 537 aa22.44■■□□□ 1.18
CSF1R-202ENST00000502660 NPHP4O75161 1426 aaPredicted RBP22.43■■□□□ 1.18
CSF1R-202ENST00000502660 KTN1Q86UP2 1357 aaKnown RBP22.42■■□□□ 1.18
CSF1R-202ENST00000502660 PLEKHH1Q9ULM0 1364 aa22.42■■□□□ 1.18
CSF1R-202ENST00000502660 NCKAP5LQ9HCH0 1330 aa22.42■■□□□ 1.18
CSF1R-202ENST00000502660 ROBO2Q9HCK4 1378 aa22.42■■□□□ 1.18
CSF1R-202ENST00000502660 SRPK2P78362 688 aaKnown RBP22.41■■□□□ 1.18
CSF1R-202ENST00000502660 CDK19Q9BWU1 502 aa22.41■■□□□ 1.18
CSF1R-202ENST00000502660 ATAD2Q6PL18 1390 aa22.41■■□□□ 1.18
CSF1R-202ENST00000502660 MYOM1P52179 1685 aa22.4■■□□□ 1.18
CSF1R-202ENST00000502660 NINLQ9Y2I6 1382 aa22.4■■□□□ 1.18
CSF1R-202ENST00000502660 RALBP1Q15311 655 aa22.39■■□□□ 1.18
CSF1R-202ENST00000502660 CABP2Q9NPB3 220 aa22.39■■□□□ 1.18
CSF1R-202ENST00000502660 KNSTRNQ9Y448 316 aa22.39■■□□□ 1.18
CSF1R-202ENST00000502660 PTCH1Q13635 1447 aa22.39■■□□□ 1.18
CSF1R-202ENST00000502660 WASLO00401 505 aaPredicted RBP22.38■■□□□ 1.17
CSF1R-202ENST00000502660 TMC1Q8TDI8 760 aa22.38■■□□□ 1.17
CSF1R-202ENST00000502660 SLC12A5Q9H2X9 1139 aa22.37■■□□□ 1.17
CSF1R-202ENST00000502660 LTBP4Q8N2S1 1624 aa22.36■■□□□ 1.17
CSF1R-202ENST00000502660 XRN1Q8IZH2 1706 aaKnown RBP22.36■■□□□ 1.17
CSF1R-202ENST00000502660 NPC1L1Q9UHC9 1359 aa22.34■■□□□ 1.17
CSF1R-202ENST00000502660 CHD2O14647 1828 aaKnown RBP22.34■■□□□ 1.17
CSF1R-202ENST00000502660 KCNA6P17658 529 aa22.33■■□□□ 1.17
CSF1R-202ENST00000502660 CARD14Q9BXL6 1004 aa22.31■■□□□ 1.16
CSF1R-202ENST00000502660 ADGRB2O60241 1585 aa22.31■■□□□ 1.16
CSF1R-202ENST00000502660 ANKRD36BQ8N2N9 1353 aa22.3■■□□□ 1.16
CSF1R-202ENST00000502660 AMER1Q5JTC6 1135 aaPredicted RBP22.3■■□□□ 1.16
CSF1R-202ENST00000502660 TERF2IPQ9NYB0 399 aa22.3■■□□□ 1.16
CSF1R-202ENST00000502660 PARD3Q8TEW0 1356 aa22.3■■□□□ 1.16
CSF1R-202ENST00000502660 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.3■■□□□ 1.16
CSF1R-202ENST00000502660 NUDT16Q96DE0 195 aaKnown RBP22.27■■□□□ 1.16
CSF1R-202ENST00000502660 MYBBP1AQ9BQG0 1328 aaKnown RBP22.27■■□□□ 1.16
CSF1R-202ENST00000502660 ZNF335Q9H4Z2 1342 aaPredicted RBP22.27■■□□□ 1.16
CSF1R-202ENST00000502660 IQSEC2Q5JU85 1478 aa22.27■■□□□ 1.16
CSF1R-202ENST00000502660 CNGB1Q14028 1251 aaPredicted RBP22.26■■□□□ 1.15
CSF1R-202ENST00000502660 CC2D1BQ5T0F9 858 aaKnown RBP22.26■■□□□ 1.15
CSF1R-202ENST00000502660 HDGFL2Q7Z4V5 671 aaPredicted RBP22.26■■□□□ 1.15
CSF1R-202ENST00000502660 CCDC61Q9Y6R9 512 aa22.26■■□□□ 1.15
CSF1R-202ENST00000502660 CABP1Q9NZU7 370 aa22.25■■□□□ 1.15
CSF1R-202ENST00000502660 NSD3Q9BZ95 1437 aa22.24■■□□□ 1.15
CSF1R-202ENST00000502660 MRS2Q9HD23 443 aa22.23■■□□□ 1.15
CSF1R-202ENST00000502660 NWD1Q149M9 1564 aa22.22■■□□□ 1.15
CSF1R-202ENST00000502660 ATP7BP35670 1465 aa22.22■■□□□ 1.15
CSF1R-202ENST00000502660 CGNL1Q0VF96 1302 aa22.22■■□□□ 1.15
CSF1R-202ENST00000502660 NLRP13Q86W25 1043 aa22.21■■□□□ 1.15
CSF1R-202ENST00000502660 USP32Q8NFA0 1604 aa22.2■■□□□ 1.15
CSF1R-202ENST00000502660 A0A1W2PP64 1363 aa22.2■■□□□ 1.14
CSF1R-202ENST00000502660 BRD4O60885 1362 aaPredicted RBP22.2■■□□□ 1.14
CSF1R-202ENST00000502660 CD163L1Q9NR16 1453 aa22.19■■□□□ 1.14
CSF1R-202ENST00000502660 PPIP5K1Q6PFW1 1433 aa22.19■■□□□ 1.14
CSF1R-202ENST00000502660 CCDC184Q52MB2 194 aa22.19■■□□□ 1.14
CSF1R-202ENST00000502660 ZNF692Q9BU19 519 aaPredicted RBP22.19■■□□□ 1.14
CSF1R-202ENST00000502660 NSD2O96028 1365 aa22.18■■□□□ 1.14
CSF1R-202ENST00000502660 PRR36Q9H6K5 1346 aa22.18■■□□□ 1.14
CSF1R-202ENST00000502660 PLEKHG3A1L390 1219 aa22.18■■□□□ 1.14
CSF1R-202ENST00000502660 YTHDC1Q96MU7 727 aaKnown RBP22.18■■□□□ 1.14
CSF1R-202ENST00000502660 NKTRP30414 1462 aaKnown RBP22.16■■□□□ 1.14
CSF1R-202ENST00000502660 PROSER2Q86WR7 435 aaPredicted RBP22.16■■□□□ 1.14
CSF1R-202ENST00000502660 CPSF1Q10570 1443 aaKnown RBP22.16■■□□□ 1.14
CSF1R-202ENST00000502660 ANKARQ7Z5J8 1434 aa22.16■■□□□ 1.14
CSF1R-202ENST00000502660 ADGRL3Q9HAR2 1447 aa22.14■■□□□ 1.13
CSF1R-202ENST00000502660 PPP2R1AP30153 589 aa22.13■■□□□ 1.13
CSF1R-202ENST00000502660 MORC1Q86VD1 984 aa22.13■■□□□ 1.13
CSF1R-202ENST00000502660 CDC42BPGQ6DT37 1551 aa22.13■■□□□ 1.13
CSF1R-202ENST00000502660 NCOA3Q9Y6Q9 1424 aa22.12■■□□□ 1.13
CSF1R-202ENST00000502660 CENPBP07199 599 aaPredicted RBP22.12■■□□□ 1.13
CSF1R-202ENST00000502660 TOPAZ1Q8N9V7 1692 aa22.11■■□□□ 1.13
CSF1R-202ENST00000502660 C14orf37Q86TY3 774 aa22.11■■□□□ 1.13
CSF1R-202ENST00000502660 FMN2Q9NZ56 1722 aa22.1■■□□□ 1.13
CSF1R-202ENST00000502660 EDC4Q6P2E9 1401 aaKnown RBP22.1■■□□□ 1.13
CSF1R-202ENST00000502660 NUTM2FA1L443 756 aa22.1■■□□□ 1.13
CSF1R-202ENST00000502660 PNISRQ8TF01 805 aaKnown RBP22.1■■□□□ 1.13
CSF1R-202ENST00000502660 ITSN1Q15811 1721 aa22.09■■□□□ 1.13
CSF1R-202ENST00000502660 NALCNQ8IZF0 1738 aa22.09■■□□□ 1.13
CSF1R-202ENST00000502660 FYB1O15117 783 aa22.09■■□□□ 1.13
CSF1R-202ENST00000502660 ACEP12821 1306 aa22.08■■□□□ 1.13
CSF1R-202ENST00000502660 STRCP1A6NGW2 1772 aa22.07■■□□□ 1.12
CSF1R-202ENST00000502660 FAM9BQ8IZU0 186 aa22.07■■□□□ 1.12
CSF1R-202ENST00000502660 C19orf44Q9H6X5 657 aa22.07■■□□□ 1.12
CSF1R-202ENST00000502660 AKAP12Q02952 1782 aa22.07■■□□□ 1.12
CSF1R-202ENST00000502660 RBM33Q96EV2 1170 aaKnown RBP22.06■■□□□ 1.12
CSF1R-202ENST00000502660 UBAP1LF5GYI3 381 aa22.05■■□□□ 1.12
CSF1R-202ENST00000502660 MON2Q7Z3U7 1717 aa22.05■■□□□ 1.12
CSF1R-202ENST00000502660 POLR3AO14802 1390 aaPredicted RBP22.05■■□□□ 1.12
CSF1R-202ENST00000502660 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.03■■□□□ 1.12
CSF1R-202ENST00000502660 NGDNQ8NEJ9 315 aaKnown RBP22.03■■□□□ 1.12
CSF1R-202ENST00000502660 GGNBP2Q9H3C7 697 aa22.03■■□□□ 1.12
CSF1R-202ENST00000502660 TMEM94Q12767 1356 aa22.02■■□□□ 1.12
CSF1R-202ENST00000502660 ANKRD26Q9UPS8 1709 aa22.01■■□□□ 1.11
CSF1R-202ENST00000502660 RGPD8O14715 1765 aaPredicted RBP22.01■■□□□ 1.11
CSF1R-202ENST00000502660 PMFBP1Q8TBY8 1022 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms