RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 USP32Q8NFA0 1604 aa21.67■■□□□ 1.06
VCAN-204ENST00000502527 NKTRP30414 1462 aaKnown RBP21.67■■□□□ 1.06
VCAN-204ENST00000502527 IPO9Q96P70 1041 aaKnown RBP21.65■■□□□ 1.06
VCAN-204ENST00000502527 SPINK5Q9NQ38 1064 aaPredicted RBP21.64■■□□□ 1.05
VCAN-204ENST00000502527 PDE4AP27815 886 aa21.64■■□□□ 1.05
VCAN-204ENST00000502527 ANKRD36BQ8N2N9 1353 aa21.63■■□□□ 1.05
VCAN-204ENST00000502527 ARHGEF28Q8N1W1 1705 aaKnown RBP21.63■■□□□ 1.05
VCAN-204ENST00000502527 NSD2O96028 1365 aa21.63■■□□□ 1.05
VCAN-204ENST00000502527 TULP4Q9NRJ4 1543 aa21.63■■□□□ 1.05
VCAN-204ENST00000502527 TNNT2P45379 298 aaPredicted RBP21.62■■□□□ 1.05
VCAN-204ENST00000502527 CFAP53Q96M91 514 aa21.61■■□□□ 1.05
VCAN-204ENST00000502527 BACH2Q9BYV9 841 aa21.61■■□□□ 1.05
VCAN-204ENST00000502527 KDM2BQ8NHM5 1336 aa21.61■■□□□ 1.05
VCAN-204ENST00000502527 CENPQQ7L2Z9 268 aaPredicted RBP21.6■■□□□ 1.05
VCAN-204ENST00000502527 WWC1Q8IX03 1113 aa21.6■■□□□ 1.05
VCAN-204ENST00000502527 RUNDC1Q96C34 613 aa21.6■■□□□ 1.05
VCAN-204ENST00000502527 NINLQ9Y2I6 1382 aa21.59■■□□□ 1.05
VCAN-204ENST00000502527 SHPRHQ149N8 1683 aa21.59■■□□□ 1.05
VCAN-204ENST00000502527 MTHFSP49914 203 aa21.58■■□□□ 1.05
VCAN-204ENST00000502527 CYB5RLQ6IPT4 315 aa21.58■■□□□ 1.05
VCAN-204ENST00000502527 PREX1Q8TCU6 1659 aa21.58■■□□□ 1.04
VCAN-204ENST00000502527 CABP2Q9NPB3 220 aa21.57■■□□□ 1.04
VCAN-204ENST00000502527 TMEM131LA2VDJ0 1609 aa21.57■■□□□ 1.04
VCAN-204ENST00000502527 DMRT2Q9Y5R5 561 aa21.57■■□□□ 1.04
VCAN-204ENST00000502527 ZBTB47Q9UFB7 747 aaPredicted RBP21.56■■□□□ 1.04
VCAN-204ENST00000502527 STK26Q9P289 416 aa21.56■■□□□ 1.04
VCAN-204ENST00000502527 PAK3O75914 559 aaPredicted RBP21.55■■□□□ 1.04
VCAN-204ENST00000502527 BCAR3O75815 825 aa21.54■■□□□ 1.04
VCAN-204ENST00000502527 SAFB2Q14151 953 aaKnown RBP eCLIP21.54■■□□□ 1.04
VCAN-204ENST00000502527 TCP11L2Q8N4U5 519 aa21.54■■□□□ 1.04
VCAN-204ENST00000502527 IQSEC2Q5JU85 1478 aa21.53■■□□□ 1.04
VCAN-204ENST00000502527 SRPK2P78362 688 aaKnown RBP21.52■■□□□ 1.04
VCAN-204ENST00000502527 FAM69CQ0P6D2 419 aa21.52■■□□□ 1.04
VCAN-204ENST00000502527 ATAD2Q6PL18 1390 aa21.52■■□□□ 1.04
VCAN-204ENST00000502527 NCBP3Q53F19 620 aaKnown RBP21.52■■□□□ 1.04
VCAN-204ENST00000502527 WDR63Q8IWG1 891 aa21.52■■□□□ 1.04
VCAN-204ENST00000502527 PHF23Q9BUL5 403 aaPredicted RBP21.52■■□□□ 1.04
VCAN-204ENST00000502527 PPP6R1Q9UPN7 881 aa21.51■■□□□ 1.03
VCAN-204ENST00000502527 PTPRMP28827 1452 aa21.51■■□□□ 1.03
VCAN-204ENST00000502527 ABCC11Q96J66 1382 aa21.51■■□□□ 1.03
VCAN-204ENST00000502527 PDE3AQ14432 1141 aa21.51■■□□□ 1.03
VCAN-204ENST00000502527 CCDC27Q2M243 656 aa21.51■■□□□ 1.03
VCAN-204ENST00000502527 YTHDC2Q9H6S0 1430 aaKnown RBP21.5■■□□□ 1.03
VCAN-204ENST00000502527 NEUROD2Q15784 382 aa21.5■■□□□ 1.03
VCAN-204ENST00000502527 FBXO31Q5XUX0 539 aaPredicted RBP21.5■■□□□ 1.03
VCAN-204ENST00000502527 A0A1W2PP64 1363 aa21.5■■□□□ 1.03
VCAN-204ENST00000502527 MYO5BQ9ULV0 1848 aa21.49■■□□□ 1.03
VCAN-204ENST00000502527 NPM2Q86SE8 214 aaKnown RBP21.49■■□□□ 1.03
VCAN-204ENST00000502527 POGKQ9P215 609 aa21.49■■□□□ 1.03
VCAN-204ENST00000502527 PRAM1Q96QH2 718 aa21.49■■□□□ 1.03
VCAN-204ENST00000502527 TERF2IPQ9NYB0 399 aa21.48■■□□□ 1.03
VCAN-204ENST00000502527 RRP7AQ9Y3A4 280 aaKnown RBP21.48■■□□□ 1.03
VCAN-204ENST00000502527 SKAP1Q86WV1 359 aa21.48■■□□□ 1.03
VCAN-204ENST00000502527 STAG3Q9UJ98 1225 aa21.47■■□□□ 1.03
VCAN-204ENST00000502527 REREQ9P2R6 1566 aa21.47■■□□□ 1.03
VCAN-204ENST00000502527 DIP2BQ9P265 1576 aa21.46■■□□□ 1.03
VCAN-204ENST00000502527 AGLP35573 1532 aa21.46■■□□□ 1.03
VCAN-204ENST00000502527 MINK1Q8N4C8 1332 aaPredicted RBP21.46■■□□□ 1.03
VCAN-204ENST00000502527 U2AF1L5P0DN76 240 aaPredicted RBP21.46■■□□□ 1.03
VCAN-204ENST00000502527 CANXP27824 592 aaKnown RBP21.46■■□□□ 1.03
VCAN-204ENST00000502527 U2AF1Q01081 240 aaKnown RBP eCLIP21.46■■□□□ 1.03
VCAN-204ENST00000502527 SENP3Q9H4L4 574 aaPredicted RBP21.46■■□□□ 1.03
VCAN-204ENST00000502527 ALKQ9UM73 1620 aa21.44■■□□□ 1.02
VCAN-204ENST00000502527 CLTCQ00610 1675 aaKnown RBP21.43■■□□□ 1.02
VCAN-204ENST00000502527 MED14O60244 1454 aa21.42■■□□□ 1.02
VCAN-204ENST00000502527 RARSP54136 660 aaKnown RBP21.42■■□□□ 1.02
VCAN-204ENST00000502527 MYH16Q9H6N6 1097 aa21.42■■□□□ 1.02
VCAN-204ENST00000502527 HDGFL2Q7Z4V5 671 aaPredicted RBP21.41■■□□□ 1.02
VCAN-204ENST00000502527 GGNBP2Q9H3C7 697 aa21.41■■□□□ 1.02
VCAN-204ENST00000502527 RIMBP3CA6NJZ7 1639 aa21.41■■□□□ 1.02
VCAN-204ENST00000502527 RIMBP3BA6NNM3 1639 aa21.41■■□□□ 1.02
VCAN-204ENST00000502527 RIMBP3Q9UFD9 1639 aa21.41■■□□□ 1.02
VCAN-204ENST00000502527 FYB1O15117 783 aa21.4■■□□□ 1.02
VCAN-204ENST00000502527 CDK19Q9BWU1 502 aa21.4■■□□□ 1.02
VCAN-204ENST00000502527 CD163L1Q9NR16 1453 aa21.39■■□□□ 1.02
VCAN-204ENST00000502527 AAMPQ13685 434 aa21.39■■□□□ 1.01
VCAN-204ENST00000502527 FAM161AQ3B820 660 aa21.39■■□□□ 1.01
VCAN-204ENST00000502527 ADGRB2O60241 1585 aa21.38■■□□□ 1.01
VCAN-204ENST00000502527 CLUAP1Q96AJ1 413 aa21.38■■□□□ 1.01
VCAN-204ENST00000502527 ARHGEF40Q8TER5 1519 aa21.38■■□□□ 1.01
VCAN-204ENST00000502527 PANK1Q8TE04 598 aa21.38■■□□□ 1.01
VCAN-204ENST00000502527 FRAT1Q92837 279 aaPredicted RBP21.38■■□□□ 1.01
VCAN-204ENST00000502527 DDRGK1Q96HY6 314 aa21.38■■□□□ 1.01
VCAN-204ENST00000502527 A2ML1A8K2U0 1454 aa21.37■■□□□ 1.01
VCAN-204ENST00000502527 COG6Q9Y2V7 657 aa21.37■■□□□ 1.01
VCAN-204ENST00000502527 SPATA31D1Q6ZQQ2 1576 aa21.36■■□□□ 1.01
VCAN-204ENST00000502527 NLRP1Q9C000 1473 aa21.36■■□□□ 1.01
VCAN-204ENST00000502527 U2SURPO15042 1029 aaKnown RBP21.36■■□□□ 1.01
VCAN-204ENST00000502527 COL3A1P02461 1466 aaPredicted RBP21.36■■□□□ 1.01
VCAN-204ENST00000502527 DLC1Q96QB1 1528 aa21.36■■□□□ 1.01
VCAN-204ENST00000502527 NBR1Q14596 966 aa21.35■■□□□ 1.01
VCAN-204ENST00000502527 RIMS2Q9UQ26 1411 aa21.35■■□□□ 1.01
VCAN-204ENST00000502527 PLEKHF1Q96S99 279 aa21.35■■□□□ 1.01
VCAN-204ENST00000502527 CABP1Q9NZU7 370 aa21.35■■□□□ 1.01
VCAN-204ENST00000502527 ANKRD26Q9UPS8 1709 aa21.35■■□□□ 1.01
VCAN-204ENST00000502527 IGHDP01880 384 aa21.34■■□□□ 1.01
VCAN-204ENST00000502527 TSPOAP1O95153 1857 aa21.33■■□□□ 1.01
VCAN-204ENST00000502527 CT47B1P0C2W7 299 aaPredicted RBP21.33■■□□□ 1.01
VCAN-204ENST00000502527 RGS3P49796 1198 aa21.33■■□□□ 1.01
VCAN-204ENST00000502527 C8orf34Q49A92 452 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms