RNA–Protein interactions for RNA: ENST00000502409.1

PRDM5-204, Transcript of PR/SET domain 5, humanhuman

TSL 5

Gene PRDM5, Length 1,044 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-204ENST00000502409 RALGAPBQ86X10 1494 aa17.73■□□□□ 0.43
PRDM5-204ENST00000502409 DCCP43146 1447 aa17.72■□□□□ 0.43
PRDM5-204ENST00000502409 MSH6P52701 1360 aa17.72■□□□□ 0.43
PRDM5-204ENST00000502409 ROBO2Q9HCK4 1378 aa17.72■□□□□ 0.43
PRDM5-204ENST00000502409 ADGRL3Q9HAR2 1447 aa17.71■□□□□ 0.43
PRDM5-204ENST00000502409 ROCK2O75116 1388 aaKnown RBP17.7■□□□□ 0.42
PRDM5-204ENST00000502409 GPRASP1Q5JY77 1395 aa17.7■□□□□ 0.42
PRDM5-204ENST00000502409 ARHGEF28Q8N1W1 1705 aaKnown RBP17.69■□□□□ 0.42
PRDM5-204ENST00000502409 NBPF8Q3BBV2 869 aa17.68■□□□□ 0.42
PRDM5-204ENST00000502409 NALCNQ8IZF0 1738 aa17.68■□□□□ 0.42
PRDM5-204ENST00000502409 C19orf44Q9H6X5 657 aa17.68■□□□□ 0.42
PRDM5-204ENST00000502409 STK26Q9P289 416 aa17.68■□□□□ 0.42
PRDM5-204ENST00000502409 TOM1O60784 492 aa17.67■□□□□ 0.42
PRDM5-204ENST00000502409 C14orf37Q86TY3 774 aa17.67■□□□□ 0.42
PRDM5-204ENST00000502409 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.67■□□□□ 0.42
PRDM5-204ENST00000502409 EIF3AQ14152 1382 aaKnown RBP17.66■□□□□ 0.42
PRDM5-204ENST00000502409 NBPF1Q3BBV0 1214 aa17.66■□□□□ 0.42
PRDM5-204ENST00000502409 CDC42BPGQ6DT37 1551 aa17.66■□□□□ 0.42
PRDM5-204ENST00000502409 KCNA4P22459 653 aa17.65■□□□□ 0.42
PRDM5-204ENST00000502409 CADPS2Q86UW7 1296 aa17.65■□□□□ 0.42
PRDM5-204ENST00000502409 TRAK1Q9UPV9 953 aa17.65■□□□□ 0.42
PRDM5-204ENST00000502409 ADGRB2O60241 1585 aa17.64■□□□□ 0.41
PRDM5-204ENST00000502409 ATF3P18847 181 aa17.63■□□□□ 0.41
PRDM5-204ENST00000502409 PRAM1Q96QH2 718 aa17.63■□□□□ 0.41
PRDM5-204ENST00000502409 POGKQ9P215 609 aa17.63■□□□□ 0.41
PRDM5-204ENST00000502409 FBXO41Q8TF61 875 aa17.62■□□□□ 0.41
PRDM5-204ENST00000502409 UBAP1LF5GYI3 381 aa17.61■□□□□ 0.41
PRDM5-204ENST00000502409 RBM33Q96EV2 1170 aaKnown RBP17.61■□□□□ 0.41
PRDM5-204ENST00000502409 CARD11Q9BXL7 1154 aa17.61■□□□□ 0.41
PRDM5-204ENST00000502409 PLEKHH1Q9ULM0 1364 aa17.61■□□□□ 0.41
PRDM5-204ENST00000502409 WAPLQ7Z5K2 1190 aa17.6■□□□□ 0.41
PRDM5-204ENST00000502409 CENPJQ9HC77 1338 aaPredicted RBP17.59■□□□□ 0.41
PRDM5-204ENST00000502409 QRICH2Q9H0J4 1663 aa17.58■□□□□ 0.41
PRDM5-204ENST00000502409 SLC4A2P04920 1241 aa17.57■□□□□ 0.4
PRDM5-204ENST00000502409 FMN2Q9NZ56 1722 aa17.57■□□□□ 0.4
PRDM5-204ENST00000502409 MST1RQ04912 1400 aa17.56■□□□□ 0.4
PRDM5-204ENST00000502409 SBNO2Q9Y2G9 1366 aa17.56■□□□□ 0.4
PRDM5-204ENST00000502409 SLC24A1O60721 1099 aa17.56■□□□□ 0.4
PRDM5-204ENST00000502409 SLAIN2Q9P270 581 aa17.55■□□□□ 0.4
PRDM5-204ENST00000502409 ANKARQ7Z5J8 1434 aa17.54■□□□□ 0.4
PRDM5-204ENST00000502409 SAFB2Q14151 953 aaKnown RBP eCLIP17.53■□□□□ 0.4
PRDM5-204ENST00000502409 POTEHQ6S545 545 aa17.53■□□□□ 0.4
PRDM5-204ENST00000502409 ROBO1Q9Y6N7 1651 aa17.52■□□□□ 0.4
PRDM5-204ENST00000502409 C1orf167Q5SNV9 1468 aa17.52■□□□□ 0.4
PRDM5-204ENST00000502409 TULP4Q9NRJ4 1543 aa17.52■□□□□ 0.39
PRDM5-204ENST00000502409 MINK1Q8N4C8 1332 aaPredicted RBP17.51■□□□□ 0.39
PRDM5-204ENST00000502409 WASLO00401 505 aaPredicted RBP17.51■□□□□ 0.39
PRDM5-204ENST00000502409 USP47Q96K76 1375 aa17.51■□□□□ 0.39
PRDM5-204ENST00000502409 PIP4K2BP78356 416 aa17.5■□□□□ 0.39
PRDM5-204ENST00000502409 ITSN1Q15811 1721 aa17.5■□□□□ 0.39
PRDM5-204ENST00000502409 KIF1AQ12756 1690 aa17.49■□□□□ 0.39
PRDM5-204ENST00000502409 EVC2Q86UK5 1308 aa17.47■□□□□ 0.39
PRDM5-204ENST00000502409 HIRIP3Q9BW71 556 aaPredicted RBP17.47■□□□□ 0.39
PRDM5-204ENST00000502409 AHDC1Q5TGY3 1603 aaPredicted RBP17.47■□□□□ 0.39
PRDM5-204ENST00000502409 NHSL1Q5SYE7 1610 aa17.46■□□□□ 0.39
PRDM5-204ENST00000502409 USP32Q8NFA0 1604 aa17.46■□□□□ 0.39
PRDM5-204ENST00000502409 ATP7BP35670 1465 aa17.45■□□□□ 0.38
PRDM5-204ENST00000502409 ZEB1P37275 1124 aaPredicted RBP17.45■□□□□ 0.38
PRDM5-204ENST00000502409 BRINP3Q76B58 766 aa17.45■□□□□ 0.38
PRDM5-204ENST00000502409 ST20-MTHFSA0A0A6YYL1 179 aa17.44■□□□□ 0.38
PRDM5-204ENST00000502409 EIF4G2P78344 907 aaKnown RBP eCLIP17.44■□□□□ 0.38
PRDM5-204ENST00000502409 CDK19Q9BWU1 502 aa17.44■□□□□ 0.38
PRDM5-204ENST00000502409 TOPAZ1Q8N9V7 1692 aa17.44■□□□□ 0.38
PRDM5-204ENST00000502409 PUS7Q96PZ0 661 aaKnown RBP17.43■□□□□ 0.38
PRDM5-204ENST00000502409 RGPD8O14715 1765 aaPredicted RBP17.43■□□□□ 0.38
PRDM5-204ENST00000502409 ATAD2Q6PL18 1390 aa17.42■□□□□ 0.38
PRDM5-204ENST00000502409 SRPK2P78362 688 aaKnown RBP17.42■□□□□ 0.38
PRDM5-204ENST00000502409 ESCO1Q5FWF5 840 aa17.42■□□□□ 0.38
PRDM5-204ENST00000502409 PHLPP1O60346 1717 aa17.41■□□□□ 0.38
PRDM5-204ENST00000502409 TESK2Q96S53 571 aa17.41■□□□□ 0.38
PRDM5-204ENST00000502409 NPHP3Q7Z494 1330 aa17.41■□□□□ 0.38
PRDM5-204ENST00000502409 ILDR1Q86SU0 546 aaPredicted RBP17.4■□□□□ 0.38
PRDM5-204ENST00000502409 NUDT16Q96DE0 195 aaKnown RBP17.4■□□□□ 0.38
PRDM5-204ENST00000502409 PHF8Q9UPP1 1060 aa17.4■□□□□ 0.38
PRDM5-204ENST00000502409 CCDC61Q9Y6R9 512 aa17.4■□□□□ 0.38
PRDM5-204ENST00000502409 NUTM2FA1L443 756 aa17.39■□□□□ 0.37
PRDM5-204ENST00000502409 TMF1P82094 1093 aa17.39■□□□□ 0.37
PRDM5-204ENST00000502409 CDCA8Q53HL2 280 aa17.39■□□□□ 0.37
PRDM5-204ENST00000502409 ORAI2Q96SN7 254 aa17.39■□□□□ 0.37
PRDM5-204ENST00000502409 PRR36Q9H6K5 1346 aa17.39■□□□□ 0.37
PRDM5-204ENST00000502409 COL16A1Q07092 1604 aaPredicted RBP17.38■□□□□ 0.37
PRDM5-204ENST00000502409 ZNF219Q9P2Y4 722 aaPredicted RBP17.37■□□□□ 0.37
PRDM5-204ENST00000502409 NINLQ9Y2I6 1382 aa17.37■□□□□ 0.37
PRDM5-204ENST00000502409 HSPA1LP34931 641 aa17.36■□□□□ 0.37
PRDM5-204ENST00000502409 CABP2Q9NPB3 220 aa17.36■□□□□ 0.37
PRDM5-204ENST00000502409 PPIP5K1Q6PFW1 1433 aa17.36■□□□□ 0.37
PRDM5-204ENST00000502409 PLEKHG3A1L390 1219 aa17.35■□□□□ 0.37
PRDM5-204ENST00000502409 HSPA5P11021 654 aaKnown RBP17.35■□□□□ 0.37
PRDM5-204ENST00000502409 SOS2Q07890 1332 aaPredicted RBP17.35■□□□□ 0.37
PRDM5-204ENST00000502409 POLR3AO14802 1390 aaPredicted RBP17.35■□□□□ 0.37
PRDM5-204ENST00000502409 PXDNQ92626 1479 aa17.35■□□□□ 0.37
PRDM5-204ENST00000502409 BRD4O60885 1362 aaPredicted RBP17.34■□□□□ 0.37
PRDM5-204ENST00000502409 ABCB7O75027 752 aa17.34■□□□□ 0.37
PRDM5-204ENST00000502409 PSME1Q06323 249 aa17.33■□□□□ 0.36
PRDM5-204ENST00000502409 LRRC59Q96AG4 307 aaKnown RBP17.33■□□□□ 0.36
PRDM5-204ENST00000502409 DISP3Q9P2K9 1392 aa17.32■□□□□ 0.36
PRDM5-204ENST00000502409 FOXO3O43524 673 aa17.32■□□□□ 0.36
PRDM5-204ENST00000502409 NGDNQ8NEJ9 315 aaKnown RBP17.32■□□□□ 0.36
PRDM5-204ENST00000502409 SHPRHQ149N8 1683 aa17.32■□□□□ 0.36
PRDM5-204ENST00000502409 SBNO1A3KN83 1393 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms