RNA–Protein interactions for RNA: ENST00000502187.5

LINC01550-202, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-202ENST00000502187 ADAMTS13Q76LX8 1427 aa12.52□□□□□ -0.4
LINC01550-202ENST00000502187 STK26Q9P289 416 aa12.52□□□□□ -0.4
LINC01550-202ENST00000502187 ATXN8OSP0DMR3 200 aa12.51□□□□□ -0.41
LINC01550-202ENST00000502187 DLC1Q96QB1 1528 aa12.51□□□□□ -0.41
LINC01550-202ENST00000502187 LRPPRCP42704 1394 aaKnown RBP12.51□□□□□ -0.41
LINC01550-202ENST00000502187 CDCA8Q53HL2 280 aa12.5□□□□□ -0.41
LINC01550-202ENST00000502187 METP08581 1390 aa12.5□□□□□ -0.41
LINC01550-202ENST00000502187 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
LINC01550-202ENST00000502187 MED14O60244 1454 aa12.49□□□□□ -0.41
LINC01550-202ENST00000502187 CPS1P31327 1500 aa12.49□□□□□ -0.41
LINC01550-202ENST00000502187 ABCC11Q96J66 1382 aa12.48□□□□□ -0.41
LINC01550-202ENST00000502187 MIER1Q8N108 512 aa12.48□□□□□ -0.41
LINC01550-202ENST00000502187 TECPR2O15040 1411 aa12.47□□□□□ -0.41
LINC01550-202ENST00000502187 MYOM1P52179 1685 aa12.47□□□□□ -0.41
LINC01550-202ENST00000502187 POGKQ9P215 609 aa12.47□□□□□ -0.41
LINC01550-202ENST00000502187 PRAM1Q96QH2 718 aa12.46□□□□□ -0.41
LINC01550-202ENST00000502187 ANP32CO43423 234 aa12.46□□□□□ -0.42
LINC01550-202ENST00000502187 ERICH6Q7L0X2 663 aa12.46□□□□□ -0.42
LINC01550-202ENST00000502187 PODXL2Q9NZ53 605 aa12.46□□□□□ -0.42
LINC01550-202ENST00000502187 TBX22Q9Y458 520 aa12.46□□□□□ -0.42
LINC01550-202ENST00000502187 TULP4Q9NRJ4 1543 aa12.46□□□□□ -0.42
LINC01550-202ENST00000502187 SAFB2Q14151 953 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINC01550-202ENST00000502187 LMTK3Q96Q04 1460 aa12.45□□□□□ -0.42
LINC01550-202ENST00000502187 C14orf37Q86TY3 774 aa12.44□□□□□ -0.42
LINC01550-202ENST00000502187 FAM135BQ49AJ0 1406 aa12.44□□□□□ -0.42
LINC01550-202ENST00000502187 EVC2Q86UK5 1308 aa12.44□□□□□ -0.42
LINC01550-202ENST00000502187 NPHP4O75161 1426 aaPredicted RBP12.44□□□□□ -0.42
LINC01550-202ENST00000502187 XRN1Q8IZH2 1706 aaKnown RBP12.44□□□□□ -0.42
LINC01550-202ENST00000502187 PAXIP1Q6ZW49 1069 aaPredicted RBP12.43□□□□□ -0.42
LINC01550-202ENST00000502187 PIK3R4Q99570 1358 aa12.43□□□□□ -0.42
LINC01550-202ENST00000502187 PTPRUQ92729 1446 aa12.43□□□□□ -0.42
LINC01550-202ENST00000502187 AMOTL2Q9Y2J4 779 aa12.43□□□□□ -0.42
LINC01550-202ENST00000502187 PLEKHH1Q9ULM0 1364 aa12.42□□□□□ -0.42
LINC01550-202ENST00000502187 CHD2O14647 1828 aaKnown RBP12.42□□□□□ -0.42
LINC01550-202ENST00000502187 MINK1Q8N4C8 1332 aaPredicted RBP12.42□□□□□ -0.42
LINC01550-202ENST00000502187 WAPLQ7Z5K2 1190 aa12.42□□□□□ -0.42
LINC01550-202ENST00000502187 SIRT1Q96EB6 747 aa12.42□□□□□ -0.42
LINC01550-202ENST00000502187 PTCH1Q13635 1447 aa12.41□□□□□ -0.42
LINC01550-202ENST00000502187 CFAP44Q96MT7 982 aa12.41□□□□□ -0.42
LINC01550-202ENST00000502187 ROBO2Q9HCK4 1378 aa12.41□□□□□ -0.42
LINC01550-202ENST00000502187 PUS7Q96PZ0 661 aaKnown RBP12.4□□□□□ -0.42
LINC01550-202ENST00000502187 ADGRB2O60241 1585 aa12.39□□□□□ -0.43
LINC01550-202ENST00000502187 SRPK2P78362 688 aaKnown RBP12.38□□□□□ -0.43
LINC01550-202ENST00000502187 PANK3Q9H999 370 aa12.38□□□□□ -0.43
LINC01550-202ENST00000502187 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.38□□□□□ -0.43
LINC01550-202ENST00000502187 KCNA6P17658 529 aa12.38□□□□□ -0.43
LINC01550-202ENST00000502187 ATAD2Q6PL18 1390 aa12.38□□□□□ -0.43
LINC01550-202ENST00000502187 CABP2Q9NPB3 220 aa12.37□□□□□ -0.43
LINC01550-202ENST00000502187 RBM33Q96EV2 1170 aaKnown RBP12.37□□□□□ -0.43
LINC01550-202ENST00000502187 TMC1Q8TDI8 760 aa12.36□□□□□ -0.43
LINC01550-202ENST00000502187 NWD1Q149M9 1564 aa12.36□□□□□ -0.43
LINC01550-202ENST00000502187 CDK19Q9BWU1 502 aa12.36□□□□□ -0.43
LINC01550-202ENST00000502187 PRKRIP1Q9H875 184 aaPredicted RBP12.36□□□□□ -0.43
LINC01550-202ENST00000502187 NINLQ9Y2I6 1382 aa12.36□□□□□ -0.43
LINC01550-202ENST00000502187 DMRT2Q9Y5R5 561 aa12.35□□□□□ -0.43
LINC01550-202ENST00000502187 CCER2I3L3R5 266 aa12.34□□□□□ -0.43
LINC01550-202ENST00000502187 WASLO00401 505 aaPredicted RBP12.34□□□□□ -0.43
LINC01550-202ENST00000502187 PER1O15534 1290 aaPredicted RBP12.34□□□□□ -0.43
LINC01550-202ENST00000502187 TSHZ2Q9NRE2 1034 aa12.34□□□□□ -0.43
LINC01550-202ENST00000502187 STRCQ7RTU9 1775 aa12.34□□□□□ -0.43
LINC01550-202ENST00000502187 CNGB1Q14028 1251 aaPredicted RBP12.34□□□□□ -0.43
LINC01550-202ENST00000502187 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.34□□□□□ -0.43
LINC01550-202ENST00000502187 KNSTRNQ9Y448 316 aa12.34□□□□□ -0.43
LINC01550-202ENST00000502187 KTN1Q86UP2 1357 aaKnown RBP12.33□□□□□ -0.43
LINC01550-202ENST00000502187 SCAF1Q9H7N4 1312 aaKnown RBP12.33□□□□□ -0.44
LINC01550-202ENST00000502187 MYCNP04198 464 aaPredicted RBP12.33□□□□□ -0.44
LINC01550-202ENST00000502187 PROSER2Q86WR7 435 aaPredicted RBP12.33□□□□□ -0.44
LINC01550-202ENST00000502187 SLC12A5Q9H2X9 1139 aa12.33□□□□□ -0.44
LINC01550-202ENST00000502187 NALCNQ8IZF0 1738 aa12.33□□□□□ -0.44
LINC01550-202ENST00000502187 ANKRD36BQ8N2N9 1353 aa12.32□□□□□ -0.44
LINC01550-202ENST00000502187 USP32Q8NFA0 1604 aa12.32□□□□□ -0.44
LINC01550-202ENST00000502187 ITSN1Q15811 1721 aa12.31□□□□□ -0.44
LINC01550-202ENST00000502187 TOPAZ1Q8N9V7 1692 aa12.31□□□□□ -0.44
LINC01550-202ENST00000502187 NKTRP30414 1462 aaKnown RBP12.31□□□□□ -0.44
LINC01550-202ENST00000502187 ATP7BP35670 1465 aa12.31□□□□□ -0.44
LINC01550-202ENST00000502187 NSD3Q9BZ95 1437 aa12.31□□□□□ -0.44
LINC01550-202ENST00000502187 RALBP1Q15311 655 aa12.3□□□□□ -0.44
LINC01550-202ENST00000502187 BBXQ8WY36 941 aaPredicted RBP12.3□□□□□ -0.44
LINC01550-202ENST00000502187 FMN2Q9NZ56 1722 aa12.3□□□□□ -0.44
LINC01550-202ENST00000502187 ZNF335Q9H4Z2 1342 aaPredicted RBP12.3□□□□□ -0.44
LINC01550-202ENST00000502187 NUTM2FA1L443 756 aa12.3□□□□□ -0.44
LINC01550-202ENST00000502187 PARD3Q8TEW0 1356 aa12.3□□□□□ -0.44
LINC01550-202ENST00000502187 CDC42BPGQ6DT37 1551 aa12.29□□□□□ -0.44
LINC01550-202ENST00000502187 PPIP5K1Q6PFW1 1433 aa12.29□□□□□ -0.44
LINC01550-202ENST00000502187 CC2D1BQ5T0F9 858 aaKnown RBP12.29□□□□□ -0.44
LINC01550-202ENST00000502187 A0A1W2PP64 1363 aa12.29□□□□□ -0.44
LINC01550-202ENST00000502187 NPC1L1Q9UHC9 1359 aa12.29□□□□□ -0.44
LINC01550-202ENST00000502187 NUDT16Q96DE0 195 aaKnown RBP12.29□□□□□ -0.44
LINC01550-202ENST00000502187 TERF2IPQ9NYB0 399 aa12.29□□□□□ -0.44
LINC01550-202ENST00000502187 STRCP1A6NGW2 1772 aa12.29□□□□□ -0.44
LINC01550-202ENST00000502187 RGPD8O14715 1765 aaPredicted RBP12.28□□□□□ -0.44
LINC01550-202ENST00000502187 AKAP12Q02952 1782 aa12.28□□□□□ -0.44
LINC01550-202ENST00000502187 CD163L1Q9NR16 1453 aa12.28□□□□□ -0.44
LINC01550-202ENST00000502187 CARD14Q9BXL6 1004 aa12.28□□□□□ -0.44
LINC01550-202ENST00000502187 ADGRL3Q9HAR2 1447 aa12.28□□□□□ -0.44
LINC01550-202ENST00000502187 NBR1Q14596 966 aa12.28□□□□□ -0.44
LINC01550-202ENST00000502187 HDGFL2Q7Z4V5 671 aaPredicted RBP12.28□□□□□ -0.44
LINC01550-202ENST00000502187 IFNLR1Q8IU57 520 aaPredicted RBP12.28□□□□□ -0.44
LINC01550-202ENST00000502187 CABP1Q9NZU7 370 aa12.28□□□□□ -0.44
LINC01550-202ENST00000502187 CCDC61Q9Y6R9 512 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms