RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 CABP2Q9NPB3 220 aa24.63■■□□□ 1.53
LINC00535-201ENST00000501400 ARHGAP23Q9P227 1491 aa24.62■■□□□ 1.53
LINC00535-201ENST00000501400 ADAMTS13Q76LX8 1427 aa24.62■■□□□ 1.53
LINC00535-201ENST00000501400 MINK1Q8N4C8 1332 aaPredicted RBP24.62■■□□□ 1.53
LINC00535-201ENST00000501400 PLEKHH1Q9ULM0 1364 aa24.62■■□□□ 1.53
LINC00535-201ENST00000501400 CPS1P31327 1500 aa24.61■■□□□ 1.53
LINC00535-201ENST00000501400 POGKQ9P215 609 aa24.61■■□□□ 1.53
LINC00535-201ENST00000501400 ANKRD36BQ8N2N9 1353 aa24.61■■□□□ 1.53
LINC00535-201ENST00000501400 TECPR2O15040 1411 aa24.61■■□□□ 1.53
LINC00535-201ENST00000501400 HDGFP51858 240 aaKnown RBP24.6■■□□□ 1.53
LINC00535-201ENST00000501400 PLEKHG1Q9ULL1 1385 aa24.59■■□□□ 1.53
LINC00535-201ENST00000501400 LTKP29376 864 aa24.58■■□□□ 1.53
LINC00535-201ENST00000501400 NINLQ9Y2I6 1382 aa24.58■■□□□ 1.53
LINC00535-201ENST00000501400 ADAMTSL3P82987 1691 aa24.58■■□□□ 1.53
LINC00535-201ENST00000501400 BLMP54132 1417 aaPredicted RBP24.58■■□□□ 1.52
LINC00535-201ENST00000501400 INSRP06213 1382 aa24.57■■□□□ 1.52
LINC00535-201ENST00000501400 SUPT16HQ9Y5B9 1047 aaKnown RBP24.57■■□□□ 1.52
LINC00535-201ENST00000501400 ATAD2Q6PL18 1390 aa24.57■■□□□ 1.52
LINC00535-201ENST00000501400 MED14O60244 1454 aa24.56■■□□□ 1.52
LINC00535-201ENST00000501400 WAPLQ7Z5K2 1190 aa24.56■■□□□ 1.52
LINC00535-201ENST00000501400 CD163L1Q9NR16 1453 aa24.56■■□□□ 1.52
LINC00535-201ENST00000501400 PLPPR3Q6T4P5 718 aa24.55■■□□□ 1.52
LINC00535-201ENST00000501400 SRPK2P78362 688 aaKnown RBP24.55■■□□□ 1.52
LINC00535-201ENST00000501400 A0A1W2PP64 1363 aa24.54■■□□□ 1.52
LINC00535-201ENST00000501400 CEP170BQ9Y4F5 1589 aaPredicted RBP24.54■■□□□ 1.52
LINC00535-201ENST00000501400 FAM135BQ49AJ0 1406 aa24.53■■□□□ 1.52
LINC00535-201ENST00000501400 SENP3-EIF4A1A0A087X0R7 540 aa24.51■■□□□ 1.51
LINC00535-201ENST00000501400 CDK19Q9BWU1 502 aa24.51■■□□□ 1.51
LINC00535-201ENST00000501400 TXNDC2Q86VQ3 553 aa24.49■■□□□ 1.51
LINC00535-201ENST00000501400 ZNF142P52746 1687 aaPredicted RBP24.49■■□□□ 1.51
LINC00535-201ENST00000501400 SMG6Q86US8 1419 aaKnown RBP24.48■■□□□ 1.51
LINC00535-201ENST00000501400 CGNL1Q0VF96 1302 aa24.48■■□□□ 1.51
LINC00535-201ENST00000501400 SIRT1Q96EB6 747 aa24.47■■□□□ 1.51
LINC00535-201ENST00000501400 BCANQ96GW7 911 aa24.47■■□□□ 1.51
LINC00535-201ENST00000501400 NSD2O96028 1365 aa24.47■■□□□ 1.51
LINC00535-201ENST00000501400 ROBO2Q9HCK4 1378 aa24.47■■□□□ 1.51
LINC00535-201ENST00000501400 ANKRD26Q9UPS8 1709 aa24.47■■□□□ 1.51
LINC00535-201ENST00000501400 PTPRUQ92729 1446 aa24.46■■□□□ 1.51
LINC00535-201ENST00000501400 ADGRB2O60241 1585 aa24.46■■□□□ 1.51
LINC00535-201ENST00000501400 DIP2AQ14689 1571 aa24.46■■□□□ 1.51
LINC00535-201ENST00000501400 EID1Q9Y6B2 187 aa24.45■■□□□ 1.5
LINC00535-201ENST00000501400 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.44■■□□□ 1.5
LINC00535-201ENST00000501400 SHPRHQ149N8 1683 aa24.44■■□□□ 1.5
LINC00535-201ENST00000501400 FKBP8Q14318 412 aa24.44■■□□□ 1.5
LINC00535-201ENST00000501400 THEMISQ8N1K5 641 aaPredicted RBP24.44■■□□□ 1.5
LINC00535-201ENST00000501400 ADAMTS8Q9UP79 889 aa24.43■■□□□ 1.5
LINC00535-201ENST00000501400 ATP7BP35670 1465 aa24.43■■□□□ 1.5
LINC00535-201ENST00000501400 MORC1Q86VD1 984 aa24.42■■□□□ 1.5
LINC00535-201ENST00000501400 KIF20BQ96Q89 1820 aa24.42■■□□□ 1.5
LINC00535-201ENST00000501400 POLR3AO14802 1390 aaPredicted RBP24.41■■□□□ 1.5
LINC00535-201ENST00000501400 WASLO00401 505 aaPredicted RBP24.41■■□□□ 1.5
LINC00535-201ENST00000501400 SLC26A8Q96RN1 970 aa24.41■■□□□ 1.5
LINC00535-201ENST00000501400 TERF2IPQ9NYB0 399 aa24.4■■□□□ 1.5
LINC00535-201ENST00000501400 NUDCQ9Y266 331 aa24.4■■□□□ 1.5
LINC00535-201ENST00000501400 CABP1Q9NZU7 370 aa24.39■■□□□ 1.5
LINC00535-201ENST00000501400 XRN1Q8IZH2 1706 aaKnown RBP24.39■■□□□ 1.49
LINC00535-201ENST00000501400 NEFLP07196 543 aa24.39■■□□□ 1.49
LINC00535-201ENST00000501400 WDR43Q15061 677 aaKnown RBP eCLIP24.39■■□□□ 1.49
LINC00535-201ENST00000501400 PTCH1Q13635 1447 aa24.36■■□□□ 1.49
LINC00535-201ENST00000501400 TBX22Q9Y458 520 aa24.36■■□□□ 1.49
LINC00535-201ENST00000501400 CDC42BPGQ6DT37 1551 aa24.36■■□□□ 1.49
LINC00535-201ENST00000501400 TOPAZ1Q8N9V7 1692 aa24.36■■□□□ 1.49
LINC00535-201ENST00000501400 TNNT2P45379 298 aaPredicted RBP24.35■■□□□ 1.49
LINC00535-201ENST00000501400 PPIP5K1Q6PFW1 1433 aa24.35■■□□□ 1.49
LINC00535-201ENST00000501400 MON2Q7Z3U7 1717 aa24.35■■□□□ 1.49
LINC00535-201ENST00000501400 CPSF1Q10570 1443 aaKnown RBP24.34■■□□□ 1.49
LINC00535-201ENST00000501400 HDGFL2Q7Z4V5 671 aaPredicted RBP24.34■■□□□ 1.49
LINC00535-201ENST00000501400 AKAP12Q02952 1782 aa24.34■■□□□ 1.49
LINC00535-201ENST00000501400 SALL2Q9Y467 1007 aaPredicted RBP24.33■■□□□ 1.49
LINC00535-201ENST00000501400 SETD1BQ9UPS6 1966 aaKnown RBP24.33■■□□□ 1.49
LINC00535-201ENST00000501400 ITSN1Q15811 1721 aa24.32■■□□□ 1.48
LINC00535-201ENST00000501400 PRR36Q9H6K5 1346 aa24.31■■□□□ 1.48
LINC00535-201ENST00000501400 FYB1O15117 783 aa24.31■■□□□ 1.48
LINC00535-201ENST00000501400 GGNBP2Q9H3C7 697 aa24.31■■□□□ 1.48
LINC00535-201ENST00000501400 NUDT16Q96DE0 195 aaKnown RBP24.3■■□□□ 1.48
LINC00535-201ENST00000501400 AMOTL2Q9Y2J4 779 aa24.29■■□□□ 1.48
LINC00535-201ENST00000501400 MTHFSP49914 203 aa24.29■■□□□ 1.48
LINC00535-201ENST00000501400 NCKAP5LQ9HCH0 1330 aa24.28■■□□□ 1.48
LINC00535-201ENST00000501400 PDE3BQ13370 1112 aa24.28■■□□□ 1.48
LINC00535-201ENST00000501400 EDC4Q6P2E9 1401 aaKnown RBP24.27■■□□□ 1.48
LINC00535-201ENST00000501400 COL3A1P02461 1466 aaPredicted RBP24.26■■□□□ 1.47
LINC00535-201ENST00000501400 NRKQ7Z2Y5 1582 aa24.26■■□□□ 1.47
LINC00535-201ENST00000501400 IRX6P78412 446 aaPredicted RBP24.25■■□□□ 1.47
LINC00535-201ENST00000501400 CCDC61Q9Y6R9 512 aa24.25■■□□□ 1.47
LINC00535-201ENST00000501400 CCDC146Q8IYE0 955 aa24.25■■□□□ 1.47
LINC00535-201ENST00000501400 PIK3R4Q99570 1358 aa24.25■■□□□ 1.47
LINC00535-201ENST00000501400 RNF123Q5XPI4 1314 aa24.24■■□□□ 1.47
LINC00535-201ENST00000501400 CDCA7LQ96GN5 454 aa24.24■■□□□ 1.47
LINC00535-201ENST00000501400 NKTRP30414 1462 aaKnown RBP24.24■■□□□ 1.47
LINC00535-201ENST00000501400 ZNF521Q96K83 1311 aa24.24■■□□□ 1.47
LINC00535-201ENST00000501400 CHD2O14647 1828 aaKnown RBP24.23■■□□□ 1.47
LINC00535-201ENST00000501400 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.21■■□□□ 1.47
LINC00535-201ENST00000501400 IQSEC2Q5JU85 1478 aa24.21■■□□□ 1.47
LINC00535-201ENST00000501400 ANKLE2Q86XL3 938 aa24.2■■□□□ 1.46
LINC00535-201ENST00000501400 CFAP53Q96M91 514 aa24.2■■□□□ 1.46
LINC00535-201ENST00000501400 KCNA6P17658 529 aa24.18■■□□□ 1.46
LINC00535-201ENST00000501400 RGPD8O14715 1765 aaPredicted RBP24.18■■□□□ 1.46
LINC00535-201ENST00000501400 APAF1O14727 1248 aa24.18■■□□□ 1.46
LINC00535-201ENST00000501400 NALCNQ8IZF0 1738 aa24.16■■□□□ 1.46
LINC00535-201ENST00000501400 FMN2Q9NZ56 1722 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms