RNA–Protein interactions for RNA: ENST00000499125.3

HMGN1P12-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 12, humanhuman

BASIC

Gene HMGN1P12, Length 195 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P12-201ENST00000499125 POTECB2RU33 542 aa8.61□□□□□ -1.03
HMGN1P12-201ENST00000499125 AAASQ9NRG9 546 aa8.61□□□□□ -1.03
HMGN1P12-201ENST00000499125 ST8SIA5O15466 376 aa8.6□□□□□ -1.03
HMGN1P12-201ENST00000499125 USP46P62068 366 aa8.6□□□□□ -1.03
HMGN1P12-201ENST00000499125 USB1Q9BQ65 265 aaKnown RBP8.6□□□□□ -1.03
HMGN1P12-201ENST00000499125 TOR4AQ9NXH8 423 aa8.6□□□□□ -1.03
HMGN1P12-201ENST00000499125 KRI1Q8N9T8 703 aaKnown RBP8.59□□□□□ -1.03
HMGN1P12-201ENST00000499125 CCDC102AQ96A19 550 aa8.59□□□□□ -1.03
HMGN1P12-201ENST00000499125 TTC24A2A3L6 582 aaPredicted RBP8.58□□□□□ -1.04
HMGN1P12-201ENST00000499125 MMP16P51512 607 aa8.58□□□□□ -1.04
HMGN1P12-201ENST00000499125 CLCN1P35523 988 aa8.57□□□□□ -1.04
HMGN1P12-201ENST00000499125 GPCPD1Q9NPB8 672 aa8.57□□□□□ -1.04
HMGN1P12-201ENST00000499125 TRIM32Q13049 653 aa8.56□□□□□ -1.04
HMGN1P12-201ENST00000499125 HLA-CQ95604 372 aa8.56□□□□□ -1.04
HMGN1P12-201ENST00000499125 WNT7AO00755 349 aa8.55□□□□□ -1.04
HMGN1P12-201ENST00000499125 AXIN1O15169 862 aa8.55□□□□□ -1.04
HMGN1P12-201ENST00000499125 HOXA2O43364 376 aa8.55□□□□□ -1.04
HMGN1P12-201ENST00000499125 DXOO77932 396 aaKnown RBP8.55□□□□□ -1.04
HMGN1P12-201ENST00000499125 AVPP01185 164 aa8.55□□□□□ -1.04
HMGN1P12-201ENST00000499125 NUTM1Q86Y26 1132 aa8.55□□□□□ -1.04
HMGN1P12-201ENST00000499125 CCDC24Q8N4L8 307 aa8.55□□□□□ -1.04
HMGN1P12-201ENST00000499125 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.54□□□□□ -1.04
HMGN1P12-201ENST00000499125 CRIPAKQ8N1N5 446 aa8.54□□□□□ -1.04
HMGN1P12-201ENST00000499125 FAM217BQ9NTX9 383 aaPredicted RBP8.54□□□□□ -1.04
HMGN1P12-201ENST00000499125 CTC1Q2NKJ3 1217 aa8.53□□□□□ -1.04
HMGN1P12-201ENST00000499125 SNIP1Q8TAD8 396 aaKnown RBP8.53□□□□□ -1.04
HMGN1P12-201ENST00000499125 GUCA2AQ02747 115 aa8.52□□□□□ -1.05
HMGN1P12-201ENST00000499125 DACH1Q9UI36 760 aa8.52□□□□□ -1.05
HMGN1P12-201ENST00000499125 SYMPKQ92797 1274 aaKnown RBP8.51□□□□□ -1.05
HMGN1P12-201ENST00000499125 MRGPRX2Q96LB1 330 aa8.51□□□□□ -1.05
HMGN1P12-201ENST00000499125 SMPD1P17405 629 aa8.49□□□□□ -1.05
HMGN1P12-201ENST00000499125 SMCPP49901 116 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P12-201ENST00000499125 REPIN1Q9BWE0 567 aaKnown RBP8.49□□□□□ -1.05
HMGN1P12-201ENST00000499125 GMPR2Q9P2T1 348 aaKnown RBP8.49□□□□□ -1.05
HMGN1P12-201ENST00000499125 C11orf95C9JLR9 678 aaPredicted RBP8.48□□□□□ -1.05
HMGN1P12-201ENST00000499125 JUNDP17535 347 aa8.48□□□□□ -1.05
HMGN1P12-201ENST00000499125 RETREG3Q86VR2 466 aa8.48□□□□□ -1.05
HMGN1P12-201ENST00000499125 J3QL48 77 aa8.47□□□□□ -1.05
HMGN1P12-201ENST00000499125 FDX1P10109 184 aa8.47□□□□□ -1.05
HMGN1P12-201ENST00000499125 SSTR3P32745 418 aaPredicted RBP8.47□□□□□ -1.05
HMGN1P12-201ENST00000499125 RC3H1Q5TC82 1133 aaKnown RBP8.47□□□□□ -1.05
HMGN1P12-201ENST00000499125 C6orf229H3BNL8 230 aa8.46□□□□□ -1.06
HMGN1P12-201ENST00000499125 WNT7BP56706 349 aa8.46□□□□□ -1.06
HMGN1P12-201ENST00000499125 SKOR1P84550 965 aa8.45□□□□□ -1.06
HMGN1P12-201ENST00000499125 TTLL12Q14166 644 aaPredicted RBP8.45□□□□□ -1.06
HMGN1P12-201ENST00000499125 TREML4Q6UXN2 200 aa8.45□□□□□ -1.06
HMGN1P12-201ENST00000499125 NUDT12Q9BQG2 462 aa8.45□□□□□ -1.06
HMGN1P12-201ENST00000499125 BARGINQ6ZT62 677 aa8.44□□□□□ -1.06
HMGN1P12-201ENST00000499125 SPIRE2Q8WWL2 714 aa8.44□□□□□ -1.06
HMGN1P12-201ENST00000499125 PCDHGC3Q9UN70 934 aa8.44□□□□□ -1.06
HMGN1P12-201ENST00000499125 HPS1Q92902 700 aa8.43□□□□□ -1.06
HMGN1P12-201ENST00000499125 ZMYND10O75800 440 aa8.42□□□□□ -1.06
HMGN1P12-201ENST00000499125 ALDH1A1P00352 501 aa8.42□□□□□ -1.06
HMGN1P12-201ENST00000499125 MS4A1P11836 297 aa8.42□□□□□ -1.06
HMGN1P12-201ENST00000499125 PTCRAQ6ISU1 281 aaPredicted RBP8.42□□□□□ -1.06
HMGN1P12-201ENST00000499125 ATP13A2Q9NQ11 1180 aa8.42□□□□□ -1.06
HMGN1P12-201ENST00000499125 MOXD2PA6NHM9 499 aa8.41□□□□□ -1.06
HMGN1P12-201ENST00000499125 NDUFV2P19404 249 aa8.41□□□□□ -1.06
HMGN1P12-201ENST00000499125 CCNYL3P0C7X3 344 aa8.4□□□□□ -1.06
HMGN1P12-201ENST00000499125 EHBP1Q8NDI1 1231 aa8.4□□□□□ -1.06
HMGN1P12-201ENST00000499125 ZC3H15Q8WU90 426 aaKnown RBP8.4□□□□□ -1.06
HMGN1P12-201ENST00000499125 AMHR2Q16671 573 aa8.39□□□□□ -1.07
HMGN1P12-201ENST00000499125 GIGYF2Q6Y7W6 1299 aaKnown RBP8.39□□□□□ -1.07
HMGN1P12-201ENST00000499125 SENP2Q9HC62 589 aa8.39□□□□□ -1.07
HMGN1P12-201ENST00000499125 WFS1O76024 890 aa8.38□□□□□ -1.07
HMGN1P12-201ENST00000499125 LCE2AQ5TA79 106 aaPredicted RBP8.38□□□□□ -1.07
HMGN1P12-201ENST00000499125 PRR7Q8TB68 274 aa8.38□□□□□ -1.07
HMGN1P12-201ENST00000499125 BEGAINQ9BUH8 593 aa8.38□□□□□ -1.07
HMGN1P12-201ENST00000499125 SPDYE5A6NIY4 337 aa8.37□□□□□ -1.07
HMGN1P12-201ENST00000499125 SNRPBP14678 240 aaKnown RBP8.37□□□□□ -1.07
HMGN1P12-201ENST00000499125 MTMR2Q13614 643 aa8.37□□□□□ -1.07
HMGN1P12-201ENST00000499125 PTPRNQ16849 979 aa8.37□□□□□ -1.07
HMGN1P12-201ENST00000499125 EVA1BQ9NVM1 165 aa8.37□□□□□ -1.07
HMGN1P12-201ENST00000499125 SIAH2O43255 324 aa8.36□□□□□ -1.07
HMGN1P12-201ENST00000499125 SH3BP2P78314 561 aa8.36□□□□□ -1.07
HMGN1P12-201ENST00000499125 TRIM47Q96LD4 638 aa8.36□□□□□ -1.07
HMGN1P12-201ENST00000499125 WASF2Q9Y6W5 498 aa8.36□□□□□ -1.07
HMGN1P12-201ENST00000499125 DIXDC1Q155Q3 683 aa8.35□□□□□ -1.07
HMGN1P12-201ENST00000499125 KIFC2Q96AC6 838 aa8.35□□□□□ -1.07
HMGN1P12-201ENST00000499125 UNC93B1Q9H1C4 597 aa8.35□□□□□ -1.07
HMGN1P12-201ENST00000499125 KCNH2Q12809 1159 aa8.34□□□□□ -1.07
HMGN1P12-201ENST00000499125 DESI1Q6ICB0 168 aa8.34□□□□□ -1.07
HMGN1P12-201ENST00000499125 BAP1Q92560 729 aa8.34□□□□□ -1.07
HMGN1P12-201ENST00000499125 NFX1Q12986 1120 aaKnown RBP8.33□□□□□ -1.08
HMGN1P12-201ENST00000499125 LINC01559Q495D7 138 aa8.33□□□□□ -1.08
HMGN1P12-201ENST00000499125 TBC1D2Q9BYX2 928 aa8.33□□□□□ -1.08
HMGN1P12-201ENST00000499125 GJA5P36382 358 aa8.32□□□□□ -1.08
HMGN1P12-201ENST00000499125 PARP9Q8IXQ6 854 aa8.32□□□□□ -1.08
HMGN1P12-201ENST00000499125 TRIM66O15016 1216 aa8.31□□□□□ -1.08
HMGN1P12-201ENST00000499125 CAPN5O15484 640 aaPredicted RBP8.31□□□□□ -1.08
HMGN1P12-201ENST00000499125 CTHP32929 405 aa8.31□□□□□ -1.08
HMGN1P12-201ENST00000499125 RSBN1LQ6PCB5 846 aaPredicted RBP8.31□□□□□ -1.08
HMGN1P12-201ENST00000499125 AK7Q96M32 723 aa8.31□□□□□ -1.08
HMGN1P12-201ENST00000499125 TERTO14746 1132 aaKnown RBP8.3□□□□□ -1.08
HMGN1P12-201ENST00000499125 ZNF511Q8NB15 262 aa8.3□□□□□ -1.08
HMGN1P12-201ENST00000499125 PCDHB15Q9Y5E8 787 aa8.3□□□□□ -1.08
HMGN1P12-201ENST00000499125 PLEKHG3A1L390 1219 aa8.29□□□□□ -1.08
HMGN1P12-201ENST00000499125 VARSP26640 1264 aaKnown RBP8.29□□□□□ -1.08
HMGN1P12-201ENST00000499125 LYPD8Q6UX82 237 aa8.29□□□□□ -1.08
HMGN1P12-201ENST00000499125 SPTLC1O15269 473 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms