RNA–Protein interactions for RNA: ENST00000498703.1

PTEN-205, Transcript of phosphatase and tensin homolog, humanhuman

TSL 2

Gene PTEN, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-205ENST00000498703 POTECB2RU33 542 aa11.17□□□□□ -0.62
PTEN-205ENST00000498703 VSIG10Q8N0Z9 540 aa11.17□□□□□ -0.62
PTEN-205ENST00000498703 MINK1Q8N4C8 1332 aaPredicted RBP11.16□□□□□ -0.62
PTEN-205ENST00000498703 CCDC102AQ96A19 550 aa11.16□□□□□ -0.62
PTEN-205ENST00000498703 USB1Q9BQ65 265 aaKnown RBP11.15□□□□□ -0.62
PTEN-205ENST00000498703 TOR4AQ9NXH8 423 aa11.15□□□□□ -0.62
PTEN-205ENST00000498703 TTC24A2A3L6 582 aaPredicted RBP11.14□□□□□ -0.63
PTEN-205ENST00000498703 HLA-CQ95604 372 aa11.14□□□□□ -0.63
PTEN-205ENST00000498703 USP46P62068 366 aa11.13□□□□□ -0.63
PTEN-205ENST00000498703 MMP16P51512 607 aa11.12□□□□□ -0.63
PTEN-205ENST00000498703 TRIM32Q13049 653 aa11.12□□□□□ -0.63
PTEN-205ENST00000498703 KRI1Q8N9T8 703 aaKnown RBP11.12□□□□□ -0.63
PTEN-205ENST00000498703 AXIN1O15169 862 aa11.11□□□□□ -0.63
PTEN-205ENST00000498703 CCDC24Q8N4L8 307 aa11.11□□□□□ -0.63
PTEN-205ENST00000498703 HOXA2O43364 376 aa11.1□□□□□ -0.63
PTEN-205ENST00000498703 CLCN1P35523 988 aa11.1□□□□□ -0.63
PTEN-205ENST00000498703 GPCPD1Q9NPB8 672 aa11.1□□□□□ -0.63
PTEN-205ENST00000498703 DXOO77932 396 aaKnown RBP11.09□□□□□ -0.63
PTEN-205ENST00000498703 AVPP01185 164 aa11.09□□□□□ -0.63
PTEN-205ENST00000498703 CRIPAKQ8N1N5 446 aa11.09□□□□□ -0.63
PTEN-205ENST00000498703 WNT7AO00755 349 aa11.08□□□□□ -0.64
PTEN-205ENST00000498703 GUCA2AQ02747 115 aa11.08□□□□□ -0.64
PTEN-205ENST00000498703 CTC1Q2NKJ3 1217 aa11.08□□□□□ -0.64
PTEN-205ENST00000498703 NUTM1Q86Y26 1132 aa11.07□□□□□ -0.64
PTEN-205ENST00000498703 FAM217BQ9NTX9 383 aaPredicted RBP11.07□□□□□ -0.64
PTEN-205ENST00000498703 DACH1Q9UI36 760 aa11.07□□□□□ -0.64
PTEN-205ENST00000498703 SNIP1Q8TAD8 396 aaKnown RBP11.06□□□□□ -0.64
PTEN-205ENST00000498703 MRGPRX2Q96LB1 330 aa11.05□□□□□ -0.64
PTEN-205ENST00000498703 REPIN1Q9BWE0 567 aaKnown RBP11.04□□□□□ -0.64
PTEN-205ENST00000498703 GMPR2Q9P2T1 348 aaKnown RBP11.04□□□□□ -0.64
PTEN-205ENST00000498703 SYMPKQ92797 1274 aaKnown RBP11.03□□□□□ -0.64
PTEN-205ENST00000498703 C11orf95C9JLR9 678 aaPredicted RBP11.02□□□□□ -0.65
PTEN-205ENST00000498703 SMPD1P17405 629 aa11.02□□□□□ -0.65
PTEN-205ENST00000498703 JUNDP17535 347 aa11.02□□□□□ -0.65
PTEN-205ENST00000498703 SMCPP49901 116 aaPredicted RBP11.01□□□□□ -0.65
PTEN-205ENST00000498703 J3QL48 77 aa11□□□□□ -0.65
PTEN-205ENST00000498703 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11□□□□□ -0.65
PTEN-205ENST00000498703 RC3H1Q5TC82 1133 aaKnown RBP10.99□□□□□ -0.65
PTEN-205ENST00000498703 RETREG3Q86VR2 466 aa10.99□□□□□ -0.65
PTEN-205ENST00000498703 C6orf229H3BNL8 230 aa10.98□□□□□ -0.65
PTEN-205ENST00000498703 FDX1P10109 184 aa10.98□□□□□ -0.65
PTEN-205ENST00000498703 WNT7BP56706 349 aa10.98□□□□□ -0.65
PTEN-205ENST00000498703 TTLL12Q14166 644 aaPredicted RBP10.98□□□□□ -0.65
PTEN-205ENST00000498703 NUDT12Q9BQG2 462 aa10.98□□□□□ -0.65
PTEN-205ENST00000498703 SKOR1P84550 965 aa10.97□□□□□ -0.65
PTEN-205ENST00000498703 TREML4Q6UXN2 200 aa10.97□□□□□ -0.65
PTEN-205ENST00000498703 SSTR3P32745 418 aaPredicted RBP10.95□□□□□ -0.66
PTEN-205ENST00000498703 HPS1Q92902 700 aa10.95□□□□□ -0.66
PTEN-205ENST00000498703 ATP13A2Q9NQ11 1180 aa10.95□□□□□ -0.66
PTEN-205ENST00000498703 ALDH1A1P00352 501 aa10.93□□□□□ -0.66
PTEN-205ENST00000498703 EHBP1Q8NDI1 1231 aa10.93□□□□□ -0.66
PTEN-205ENST00000498703 PCDHGC3Q9UN70 934 aa10.93□□□□□ -0.66
PTEN-205ENST00000498703 MS4A1P11836 297 aa10.92□□□□□ -0.66
PTEN-205ENST00000498703 WFS1O76024 890 aa10.91□□□□□ -0.66
PTEN-205ENST00000498703 CCNYL3P0C7X3 344 aa10.91□□□□□ -0.66
PTEN-205ENST00000498703 PTCRAQ6ISU1 281 aaPredicted RBP10.91□□□□□ -0.66
PTEN-205ENST00000498703 SPIRE2Q8WWL2 714 aa10.91□□□□□ -0.66
PTEN-205ENST00000498703 NDUFV2P19404 249 aa10.9□□□□□ -0.66
PTEN-205ENST00000498703 SENP2Q9HC62 589 aa10.9□□□□□ -0.66
PTEN-205ENST00000498703 MOXD2PA6NHM9 499 aa10.89□□□□□ -0.67
PTEN-205ENST00000498703 GIGYF2Q6Y7W6 1299 aaKnown RBP10.89□□□□□ -0.67
PTEN-205ENST00000498703 BARGINQ6ZT62 677 aa10.89□□□□□ -0.67
PTEN-205ENST00000498703 WASF2Q9Y6W5 498 aa10.88□□□□□ -0.67
PTEN-205ENST00000498703 ZMYND10O75800 440 aa10.87□□□□□ -0.67
PTEN-205ENST00000498703 SNRPBP14678 240 aaKnown RBP10.87□□□□□ -0.67
PTEN-205ENST00000498703 AMHR2Q16671 573 aa10.87□□□□□ -0.67
PTEN-205ENST00000498703 PTPRNQ16849 979 aa10.87□□□□□ -0.67
PTEN-205ENST00000498703 LCE2AQ5TA79 106 aaPredicted RBP10.87□□□□□ -0.67
PTEN-205ENST00000498703 TRIM47Q96LD4 638 aa10.87□□□□□ -0.67
PTEN-205ENST00000498703 LINC01559Q495D7 138 aa10.86□□□□□ -0.67
PTEN-205ENST00000498703 PRR7Q8TB68 274 aa10.86□□□□□ -0.67
PTEN-205ENST00000498703 ZC3H15Q8WU90 426 aaKnown RBP10.86□□□□□ -0.67
PTEN-205ENST00000498703 MTMR2Q13614 643 aa10.85□□□□□ -0.67
PTEN-205ENST00000498703 KIFC2Q96AC6 838 aa10.85□□□□□ -0.67
PTEN-205ENST00000498703 BEGAINQ9BUH8 593 aa10.85□□□□□ -0.67
PTEN-205ENST00000498703 UNC93B1Q9H1C4 597 aa10.85□□□□□ -0.67
PTEN-205ENST00000498703 SH3BP2P78314 561 aa10.84□□□□□ -0.67
PTEN-205ENST00000498703 NFX1Q12986 1120 aaKnown RBP10.83□□□□□ -0.68
PTEN-205ENST00000498703 SPDYE5A6NIY4 337 aa10.82□□□□□ -0.68
PTEN-205ENST00000498703 SIAH2O43255 324 aa10.82□□□□□ -0.68
PTEN-205ENST00000498703 EVA1BQ9NVM1 165 aa10.82□□□□□ -0.68
PTEN-205ENST00000498703 KCNH2Q12809 1159 aa10.81□□□□□ -0.68
PTEN-205ENST00000498703 BAP1Q92560 729 aa10.81□□□□□ -0.68
PTEN-205ENST00000498703 BMP1P13497 986 aa10.8□□□□□ -0.68
PTEN-205ENST00000498703 TBC1D2Q9BYX2 928 aa10.8□□□□□ -0.68
PTEN-205ENST00000498703 TLL2Q9Y6L7 1015 aa10.8□□□□□ -0.68
PTEN-205ENST00000498703 CAPN5O15484 640 aaPredicted RBP10.79□□□□□ -0.68
PTEN-205ENST00000498703 DIXDC1Q155Q3 683 aa10.79□□□□□ -0.68
PTEN-205ENST00000498703 PARP9Q8IXQ6 854 aa10.79□□□□□ -0.68
PTEN-205ENST00000498703 TERTO14746 1132 aaKnown RBP10.78□□□□□ -0.68
PTEN-205ENST00000498703 CTHP32929 405 aa10.78□□□□□ -0.68
PTEN-205ENST00000498703 DESI1Q6ICB0 168 aa10.78□□□□□ -0.68
PTEN-205ENST00000498703 ZNF511Q8NB15 262 aa10.78□□□□□ -0.68
PTEN-205ENST00000498703 RSBN1LQ6PCB5 846 aaPredicted RBP10.77□□□□□ -0.69
PTEN-205ENST00000498703 PLEKHG3A1L390 1219 aa10.75□□□□□ -0.69
PTEN-205ENST00000498703 VARSP26640 1264 aaKnown RBP10.75□□□□□ -0.69
PTEN-205ENST00000498703 GJA5P36382 358 aa10.74□□□□□ -0.69
PTEN-205ENST00000498703 INSM1Q01101 510 aaPredicted RBP10.74□□□□□ -0.69
PTEN-205ENST00000498703 TRIM46Q7Z4K8 759 aa10.74□□□□□ -0.69
PTEN-205ENST00000498703 ZBTB3Q9H5J0 574 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms