RNA–Protein interactions for RNA: ENST00000498529.5

CSNK1E-214, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-214ENST00000498529 ADGRL3Q9HAR2 1447 aa8.9□□□□□ -0.98
CSNK1E-214ENST00000498529 SPDYE4A6NLX3 237 aa8.9□□□□□ -0.98
CSNK1E-214ENST00000498529 POLA2Q14181 598 aa8.9□□□□□ -0.98
CSNK1E-214ENST00000498529 ZBTB12Q9Y330 459 aaPredicted RBP8.9□□□□□ -0.98
CSNK1E-214ENST00000498529 PNPLA6Q8IY17 1366 aa8.89□□□□□ -0.99
CSNK1E-214ENST00000498529 KNDC1Q76NI1 1749 aa8.89□□□□□ -0.99
CSNK1E-214ENST00000498529 REM2Q8IYK8 340 aaPredicted RBP8.89□□□□□ -0.99
CSNK1E-214ENST00000498529 BRINP3Q76B58 766 aa8.88□□□□□ -0.99
CSNK1E-214ENST00000498529 PTCH1Q13635 1447 aa8.88□□□□□ -0.99
CSNK1E-214ENST00000498529 LRP5O75197 1615 aa8.87□□□□□ -0.99
CSNK1E-214ENST00000498529 ROCK1Q13464 1354 aa8.87□□□□□ -0.99
CSNK1E-214ENST00000498529 CDC42BPGQ6DT37 1551 aa8.87□□□□□ -0.99
CSNK1E-214ENST00000498529 MYOM2P54296 1465 aa8.86□□□□□ -0.99
CSNK1E-214ENST00000498529 FXR2P51116 673 aaKnown RBP eCLIP8.86□□□□□ -0.99
CSNK1E-214ENST00000498529 ZNF772Q68DY9 489 aaPredicted RBP8.86□□□□□ -0.99
CSNK1E-214ENST00000498529 EVX2Q03828 476 aa8.85□□□□□ -0.99
CSNK1E-214ENST00000498529 CADPS2Q86UW7 1296 aa8.85□□□□□ -0.99
CSNK1E-214ENST00000498529 C19orf44Q9H6X5 657 aa8.85□□□□□ -0.99
CSNK1E-214ENST00000498529 STAG3Q9UJ98 1225 aa8.85□□□□□ -0.99
CSNK1E-214ENST00000498529 FBXO3Q9UK99 471 aa8.85□□□□□ -0.99
CSNK1E-214ENST00000498529 GLI3P10071 1580 aa8.85□□□□□ -0.99
CSNK1E-214ENST00000498529 FMN2Q9NZ56 1722 aa8.85□□□□□ -0.99
CSNK1E-214ENST00000498529 METP08581 1390 aa8.85□□□□□ -0.99
CSNK1E-214ENST00000498529 C1orf167Q5SNV9 1468 aa8.84□□□□□ -0.99
CSNK1E-214ENST00000498529 ATRNO75882 1429 aa8.84□□□□□ -0.99
CSNK1E-214ENST00000498529 CHIC2Q9UKJ5 165 aa8.84□□□□□ -0.99
CSNK1E-214ENST00000498529 PLCH1Q4KWH8 1693 aa8.84□□□□□ -0.99
CSNK1E-214ENST00000498529 RGPD8O14715 1765 aaPredicted RBP8.84□□□□□ -1
CSNK1E-214ENST00000498529 PXDNQ92626 1479 aa8.83□□□□□ -1
CSNK1E-214ENST00000498529 AFF2P51816 1311 aa8.83□□□□□ -1
CSNK1E-214ENST00000498529 CRYBG1Q9Y4K1 1723 aa8.83□□□□□ -1
CSNK1E-214ENST00000498529 SLC24A1O60721 1099 aa8.83□□□□□ -1
CSNK1E-214ENST00000498529 NRAPQ86VF7 1730 aa8.83□□□□□ -1
CSNK1E-214ENST00000498529 NWD2Q9ULI1 1742 aa8.83□□□□□ -1
CSNK1E-214ENST00000498529 LOC105371045A0A1W2PR82 267 aa8.82□□□□□ -1
CSNK1E-214ENST00000498529 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.82□□□□□ -1
CSNK1E-214ENST00000498529 TRIM52Q96A61 297 aa8.82□□□□□ -1
CSNK1E-214ENST00000498529 KIF1AQ12756 1690 aa8.81□□□□□ -1
CSNK1E-214ENST00000498529 USP32Q8NFA0 1604 aa8.81□□□□□ -1
CSNK1E-214ENST00000498529 AMOTL2Q9Y2J4 779 aa8.81□□□□□ -1
CSNK1E-214ENST00000498529 PITPNM1O00562 1244 aa8.8□□□□□ -1
CSNK1E-214ENST00000498529 RXRBP28702 533 aa8.8□□□□□ -1
CSNK1E-214ENST00000498529 BCL9LQ86UU0 1499 aa8.8□□□□□ -1
CSNK1E-214ENST00000498529 TNS1Q9HBL0 1735 aaKnown RBP8.8□□□□□ -1
CSNK1E-214ENST00000498529 SOS2Q07890 1332 aaPredicted RBP8.8□□□□□ -1
CSNK1E-214ENST00000498529 ROBO2Q9HCK4 1378 aa8.79□□□□□ -1
CSNK1E-214ENST00000498529 TRPM3Q9HCF6 1732 aaPredicted RBP8.78□□□□□ -1
CSNK1E-214ENST00000498529 PPP1R15AO75807 674 aaPredicted RBP8.78□□□□□ -1
CSNK1E-214ENST00000498529 ATF3P18847 181 aa8.78□□□□□ -1
CSNK1E-214ENST00000498529 NUTM2DQ5VT03 806 aaPredicted RBP8.78□□□□□ -1
CSNK1E-214ENST00000498529 SLIT2O94813 1529 aa8.78□□□□□ -1
CSNK1E-214ENST00000498529 TECPR2O15040 1411 aa8.78□□□□□ -1
CSNK1E-214ENST00000498529 RBM6P78332 1123 aaKnown RBP8.77□□□□□ -1.01
CSNK1E-214ENST00000498529 DDX17Q92841 729 aaKnown RBP8.77□□□□□ -1.01
CSNK1E-214ENST00000498529 ATAD2Q6PL18 1390 aa8.76□□□□□ -1.01
CSNK1E-214ENST00000498529 ALS2Q96Q42 1657 aa8.76□□□□□ -1.01
CSNK1E-214ENST00000498529 HDGFP51858 240 aaKnown RBP8.76□□□□□ -1.01
CSNK1E-214ENST00000498529 MEX3CQ5U5Q3 659 aaKnown RBP8.76□□□□□ -1.01
CSNK1E-214ENST00000498529 NUP155O75694 1391 aa8.75□□□□□ -1.01
CSNK1E-214ENST00000498529 HFM1A2PYH4 1435 aa8.75□□□□□ -1.01
CSNK1E-214ENST00000498529 FNBP4Q8N3X1 1017 aaPredicted RBP8.75□□□□□ -1.01
CSNK1E-214ENST00000498529 LRRC59Q96AG4 307 aaKnown RBP8.75□□□□□ -1.01
CSNK1E-214ENST00000498529 THSD7AQ9UPZ6 1657 aa8.75□□□□□ -1.01
CSNK1E-214ENST00000498529 RGPD1P0DJD0 1748 aa8.74□□□□□ -1.01
CSNK1E-214ENST00000498529 NUTM2BA6NNL0 878 aaPredicted RBP8.74□□□□□ -1.01
CSNK1E-214ENST00000498529 NUTM2EB1AL46 878 aaPredicted RBP8.74□□□□□ -1.01
CSNK1E-214ENST00000498529 NUTM2AQ8IVF1 878 aaPredicted RBP8.74□□□□□ -1.01
CSNK1E-214ENST00000498529 RREB1Q92766 1687 aa8.74□□□□□ -1.01
CSNK1E-214ENST00000498529 ADGRB2O60241 1585 aa8.73□□□□□ -1.01
CSNK1E-214ENST00000498529 NAIPQ13075 1403 aa8.73□□□□□ -1.01
CSNK1E-214ENST00000498529 BCANQ96GW7 911 aa8.73□□□□□ -1.01
CSNK1E-214ENST00000498529 C8orf37Q96NL8 207 aa8.73□□□□□ -1.01
CSNK1E-214ENST00000498529 RRBP1Q9P2E9 1410 aaKnown RBP8.72□□□□□ -1.01
CSNK1E-214ENST00000498529 RALGAPBQ86X10 1494 aa8.72□□□□□ -1.01
CSNK1E-214ENST00000498529 C14orf37Q86TY3 774 aa8.72□□□□□ -1.01
CSNK1E-214ENST00000498529 QTRT2Q9H974 415 aaKnown RBP8.72□□□□□ -1.01
CSNK1E-214ENST00000498529 VASPP50552 380 aaPredicted RBP8.71□□□□□ -1.02
CSNK1E-214ENST00000498529 FAM50AQ14320 339 aaKnown RBP8.71□□□□□ -1.02
CSNK1E-214ENST00000498529 SPATA31E1Q6ZUB1 1445 aa8.71□□□□□ -1.02
CSNK1E-214ENST00000498529 CHGAP10645 457 aaKnown RBP8.7□□□□□ -1.02
CSNK1E-214ENST00000498529 ORAI2Q96SN7 254 aa8.7□□□□□ -1.02
CSNK1E-214ENST00000498529 BLMP54132 1417 aaPredicted RBP8.7□□□□□ -1.02
CSNK1E-214ENST00000498529 NRXN1Q9ULB1 1477 aa8.7□□□□□ -1.02
CSNK1E-214ENST00000498529 PHRF1Q9P1Y6 1649 aaKnown RBP8.69□□□□□ -1.02
CSNK1E-214ENST00000498529 NUP188Q5SRE5 1749 aa8.69□□□□□ -1.02
CSNK1E-214ENST00000498529 TRPC5Q9UL62 973 aaPredicted RBP8.69□□□□□ -1.02
CSNK1E-214ENST00000498529 SSUH2Q9Y2M2 353 aa8.69□□□□□ -1.02
CSNK1E-214ENST00000498529 PIK3C2GO75747 1445 aa8.69□□□□□ -1.02
CSNK1E-214ENST00000498529 COL14A1Q05707 1796 aaKnown RBP8.68□□□□□ -1.02
CSNK1E-214ENST00000498529 SPDYE2BA6NHP3 402 aa8.68□□□□□ -1.02
CSNK1E-214ENST00000498529 GABBR2O75899 941 aa8.68□□□□□ -1.02
CSNK1E-214ENST00000498529 SPDYE6P0CI01 402 aa8.68□□□□□ -1.02
CSNK1E-214ENST00000498529 SPDYE2Q495Y8 402 aa8.68□□□□□ -1.02
CSNK1E-214ENST00000498529 USP21Q9UK80 565 aa8.68□□□□□ -1.02
CSNK1E-214ENST00000498529 ADAMTS2O95450 1211 aa8.67□□□□□ -1.02
CSNK1E-214ENST00000498529 TOPAZ1Q8N9V7 1692 aa8.67□□□□□ -1.02
CSNK1E-214ENST00000498529 NGLY1Q96IV0 654 aa8.67□□□□□ -1.02
CSNK1E-214ENST00000498529 WNK3Q9BYP7 1800 aa8.66□□□□□ -1.02
CSNK1E-214ENST00000498529 CCDC144AA2RUR9 1427 aa8.66□□□□□ -1.02
CSNK1E-214ENST00000498529 DISP2A7MBM2 1401 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms