RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 NCOA3Q9Y6Q9 1424 aa14.51□□□□□ -0.09
TSPAN1-209ENST00000498443 AMOTL2Q9Y2J4 779 aa14.51□□□□□ -0.09
TSPAN1-209ENST00000498443 TMEM132EQ6IEE7 984 aa14.5□□□□□ -0.09
TSPAN1-209ENST00000498443 LRRC59Q96AG4 307 aaKnown RBP14.5□□□□□ -0.09
TSPAN1-209ENST00000498443 PPLO60437 1756 aa14.48□□□□□ -0.09
TSPAN1-209ENST00000498443 CFAP70Q5T0N1 1121 aa14.48□□□□□ -0.09
TSPAN1-209ENST00000498443 DCAF11Q8TEB1 546 aa14.48□□□□□ -0.09
TSPAN1-209ENST00000498443 ACIN1Q9UKV3 1341 aaKnown RBP14.47□□□□□ -0.09
TSPAN1-209ENST00000498443 VGFO15240 615 aaPredicted RBP14.47□□□□□ -0.09
TSPAN1-209ENST00000498443 USP21Q9UK80 565 aa14.47□□□□□ -0.09
TSPAN1-209ENST00000498443 NHSL1Q5SYE7 1610 aa14.47□□□□□ -0.09
TSPAN1-209ENST00000498443 PNPLA6Q8IY17 1366 aa14.47□□□□□ -0.09
TSPAN1-209ENST00000498443 RPGRIP1LQ68CZ1 1315 aa14.46□□□□□ -0.09
TSPAN1-209ENST00000498443 STK26Q9P289 416 aa14.46□□□□□ -0.09
TSPAN1-209ENST00000498443 MST1RQ04912 1400 aa14.45□□□□□ -0.1
TSPAN1-209ENST00000498443 L3MBTL2Q969R5 705 aa14.44□□□□□ -0.1
TSPAN1-209ENST00000498443 IFT172Q9UG01 1749 aa14.44□□□□□ -0.1
TSPAN1-209ENST00000498443 PIK3R4Q99570 1358 aa14.43□□□□□ -0.1
TSPAN1-209ENST00000498443 TRPC5Q9UL62 973 aaPredicted RBP14.42□□□□□ -0.1
TSPAN1-209ENST00000498443 WAPLQ7Z5K2 1190 aa14.41□□□□□ -0.1
TSPAN1-209ENST00000498443 DCCP43146 1447 aa14.41□□□□□ -0.1
TSPAN1-209ENST00000498443 C14orf93Q9H972 538 aaKnown RBP14.4□□□□□ -0.1
TSPAN1-209ENST00000498443 TIMELESSQ9UNS1 1208 aa14.4□□□□□ -0.1
TSPAN1-209ENST00000498443 ROBO2Q9HCK4 1378 aa14.39□□□□□ -0.11
TSPAN1-209ENST00000498443 NBPF1Q3BBV0 1214 aa14.39□□□□□ -0.11
TSPAN1-209ENST00000498443 PIK3C2GO75747 1445 aa14.39□□□□□ -0.11
TSPAN1-209ENST00000498443 PLEKHH1Q9ULM0 1364 aa14.38□□□□□ -0.11
TSPAN1-209ENST00000498443 NRXN1Q9ULB1 1477 aa14.38□□□□□ -0.11
TSPAN1-209ENST00000498443 NBPF8Q3BBV2 869 aa14.37□□□□□ -0.11
TSPAN1-209ENST00000498443 XRN1Q8IZH2 1706 aaKnown RBP14.37□□□□□ -0.11
TSPAN1-209ENST00000498443 NALCNQ8IZF0 1738 aa14.36□□□□□ -0.11
TSPAN1-209ENST00000498443 SAFB2Q14151 953 aaKnown RBP eCLIP14.36□□□□□ -0.11
TSPAN1-209ENST00000498443 EP400Q96L91 3159 aa14.35□□□□□ -0.11
TSPAN1-209ENST00000498443 ADGRL3Q9HAR2 1447 aa14.35□□□□□ -0.11
TSPAN1-209ENST00000498443 DEFB132Q7Z7B7 95 aa14.35□□□□□ -0.11
TSPAN1-209ENST00000498443 ORAI2Q96SN7 254 aa14.35□□□□□ -0.11
TSPAN1-209ENST00000498443 MYOM2P54296 1465 aa14.35□□□□□ -0.11
TSPAN1-209ENST00000498443 ATRNO75882 1429 aa14.34□□□□□ -0.11
TSPAN1-209ENST00000498443 CCDC125Q86Z20 511 aa14.34□□□□□ -0.11
TSPAN1-209ENST00000498443 TRAK1Q9UPV9 953 aa14.34□□□□□ -0.11
TSPAN1-209ENST00000498443 C1orf167Q5SNV9 1468 aa14.33□□□□□ -0.12
TSPAN1-209ENST00000498443 NUTM2FA1L443 756 aa14.32□□□□□ -0.12
TSPAN1-209ENST00000498443 SF3B2Q13435 895 aaKnown RBP14.32□□□□□ -0.12
TSPAN1-209ENST00000498443 FNBP4Q8N3X1 1017 aaPredicted RBP14.32□□□□□ -0.12
TSPAN1-209ENST00000498443 LRPPRCP42704 1394 aaKnown RBP14.32□□□□□ -0.12
TSPAN1-209ENST00000498443 PTCH1Q13635 1447 aa14.32□□□□□ -0.12
TSPAN1-209ENST00000498443 YTHDC2Q9H6S0 1430 aaKnown RBP14.32□□□□□ -0.12
TSPAN1-209ENST00000498443 PSDA5PKW4 1024 aaPredicted RBP14.31□□□□□ -0.12
TSPAN1-209ENST00000498443 XPCQ01831 940 aaPredicted RBP14.31□□□□□ -0.12
TSPAN1-209ENST00000498443 ADGRB1O14514 1584 aa14.3□□□□□ -0.12
TSPAN1-209ENST00000498443 GJD4Q96KN9 370 aaPredicted RBP14.3□□□□□ -0.12
TSPAN1-209ENST00000498443 PRAG1Q86YV5 1406 aa14.3□□□□□ -0.12
TSPAN1-209ENST00000498443 PLEKHG5O94827 1062 aa14.29□□□□□ -0.12
TSPAN1-209ENST00000498443 PRAM1Q96QH2 718 aa14.29□□□□□ -0.12
TSPAN1-209ENST00000498443 SOS2Q07890 1332 aaPredicted RBP14.29□□□□□ -0.12
TSPAN1-209ENST00000498443 BLMP54132 1417 aaPredicted RBP14.28□□□□□ -0.12
TSPAN1-209ENST00000498443 ABCC11Q96J66 1382 aa14.28□□□□□ -0.12
TSPAN1-209ENST00000498443 HIRIP3Q9BW71 556 aaPredicted RBP14.28□□□□□ -0.12
TSPAN1-209ENST00000498443 BCL9LQ86UU0 1499 aa14.27□□□□□ -0.12
TSPAN1-209ENST00000498443 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.13
TSPAN1-209ENST00000498443 ESCO1Q5FWF5 840 aa14.26□□□□□ -0.13
TSPAN1-209ENST00000498443 TONSLQ96HA7 1378 aa14.25□□□□□ -0.13
TSPAN1-209ENST00000498443 MINK1Q8N4C8 1332 aaPredicted RBP14.25□□□□□ -0.13
TSPAN1-209ENST00000498443 MARF1Q9Y4F3 1742 aaKnown RBP14.25□□□□□ -0.13
TSPAN1-209ENST00000498443 CCDC9Q9Y3X0 531 aaKnown RBP14.25□□□□□ -0.13
TSPAN1-209ENST00000498443 COL22A1Q8NFW1 1626 aaPredicted RBP14.25□□□□□ -0.13
TSPAN1-209ENST00000498443 BRWD3Q6RI45 1802 aa14.25□□□□□ -0.13
TSPAN1-209ENST00000498443 LRP5O75197 1615 aa14.24□□□□□ -0.13
TSPAN1-209ENST00000498443 A0A0G2JS52 829 aa14.24□□□□□ -0.13
TSPAN1-209ENST00000498443 MYT1Q01538 1121 aa14.24□□□□□ -0.13
TSPAN1-209ENST00000498443 TECPR2O15040 1411 aa14.24□□□□□ -0.13
TSPAN1-209ENST00000498443 LAMC1P11047 1609 aa14.23□□□□□ -0.13
TSPAN1-209ENST00000498443 POGKQ9P215 609 aa14.23□□□□□ -0.13
TSPAN1-209ENST00000498443 RALGAPBQ86X10 1494 aa14.23□□□□□ -0.13
TSPAN1-209ENST00000498443 GLI3P10071 1580 aa14.22□□□□□ -0.13
TSPAN1-209ENST00000498443 FOXO3O43524 673 aa14.22□□□□□ -0.13
TSPAN1-209ENST00000498443 HAP1P54257 671 aaPredicted RBP14.22□□□□□ -0.13
TSPAN1-209ENST00000498443 SEPT12Q8IYM1 358 aa14.22□□□□□ -0.13
TSPAN1-209ENST00000498443 NPHP3Q7Z494 1330 aa14.21□□□□□ -0.13
TSPAN1-209ENST00000498443 UNC5CLQ8IV45 518 aa14.21□□□□□ -0.13
TSPAN1-209ENST00000498443 MIER1Q8N108 512 aa14.21□□□□□ -0.13
TSPAN1-209ENST00000498443 STAC3Q96MF2 364 aa14.2□□□□□ -0.14
TSPAN1-209ENST00000498443 KNDC1Q76NI1 1749 aa14.19□□□□□ -0.14
TSPAN1-209ENST00000498443 SIRT1Q96EB6 747 aa14.19□□□□□ -0.14
TSPAN1-209ENST00000498443 TRPM1Q7Z4N2 1603 aa14.19□□□□□ -0.14
TSPAN1-209ENST00000498443 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.18□□□□□ -0.14
TSPAN1-209ENST00000498443 PXDNQ92626 1479 aa14.18□□□□□ -0.14
TSPAN1-209ENST00000498443 PRR36Q9H6K5 1346 aa14.17□□□□□ -0.14
TSPAN1-209ENST00000498443 BAG6P46379 1132 aa14.17□□□□□ -0.14
TSPAN1-209ENST00000498443 KRT27Q7Z3Y8 459 aa14.17□□□□□ -0.14
TSPAN1-209ENST00000498443 ROCK2O75116 1388 aaKnown RBP14.17□□□□□ -0.14
TSPAN1-209ENST00000498443 ARHGEF28Q8N1W1 1705 aaKnown RBP14.16□□□□□ -0.14
TSPAN1-209ENST00000498443 R3HDM1Q15032 1099 aaKnown RBP14.16□□□□□ -0.14
TSPAN1-209ENST00000498443 DLC1Q96QB1 1528 aa14.15□□□□□ -0.14
TSPAN1-209ENST00000498443 RGPD8O14715 1765 aaPredicted RBP14.15□□□□□ -0.14
TSPAN1-209ENST00000498443 EN1Q05925 392 aaPredicted RBP14.15□□□□□ -0.14
TSPAN1-209ENST00000498443 PMFBP1Q8TBY8 1022 aa14.15□□□□□ -0.14
TSPAN1-209ENST00000498443 CARD11Q9BXL7 1154 aa14.15□□□□□ -0.14
TSPAN1-209ENST00000498443 KIAA1210Q9ULL0 1709 aa14.15□□□□□ -0.14
TSPAN1-209ENST00000498443 SLIT2O94813 1529 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms