RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 DLC1Q96QB1 1528 aa16.14■□□□□ 0.18
CTTN-208ENST00000498223 MSH6P52701 1360 aa16.14■□□□□ 0.17
CTTN-208ENST00000498223 GPRASP1Q5JY77 1395 aa16.14■□□□□ 0.17
CTTN-208ENST00000498223 ROBO2Q9HCK4 1378 aa16.14■□□□□ 0.17
CTTN-208ENST00000498223 WAPLQ7Z5K2 1190 aa16.14■□□□□ 0.17
CTTN-208ENST00000498223 PRAM1Q96QH2 718 aa16.14■□□□□ 0.17
CTTN-208ENST00000498223 PTCH1Q13635 1447 aa16.13■□□□□ 0.17
CTTN-208ENST00000498223 TECPR2O15040 1411 aa16.12■□□□□ 0.17
CTTN-208ENST00000498223 PHF23Q9BUL5 403 aaPredicted RBP16.12■□□□□ 0.17
CTTN-208ENST00000498223 USP47Q96K76 1375 aa16.12■□□□□ 0.17
CTTN-208ENST00000498223 NCOA3Q9Y6Q9 1424 aa16.11■□□□□ 0.17
CTTN-208ENST00000498223 SIRT1Q96EB6 747 aa16.11■□□□□ 0.17
CTTN-208ENST00000498223 CENPJQ9HC77 1338 aaPredicted RBP16.11■□□□□ 0.17
CTTN-208ENST00000498223 PLEKHH1Q9ULM0 1364 aa16.11■□□□□ 0.17
CTTN-208ENST00000498223 NALCNQ8IZF0 1738 aa16.11■□□□□ 0.17
CTTN-208ENST00000498223 EIF4G2P78344 907 aaKnown RBP eCLIP16.1■□□□□ 0.17
CTTN-208ENST00000498223 MINK1Q8N4C8 1332 aaPredicted RBP16.1■□□□□ 0.17
CTTN-208ENST00000498223 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.1■□□□□ 0.17
CTTN-208ENST00000498223 SLAIN2Q9P270 581 aa16.08■□□□□ 0.16
CTTN-208ENST00000498223 ST20-MTHFSA0A0A6YYL1 179 aa16.07■□□□□ 0.16
CTTN-208ENST00000498223 HSPA5P11021 654 aaKnown RBP16.07■□□□□ 0.16
CTTN-208ENST00000498223 HIRIP3Q9BW71 556 aaPredicted RBP16.07■□□□□ 0.16
CTTN-208ENST00000498223 ROBO1Q9Y6N7 1651 aa16.06■□□□□ 0.16
CTTN-208ENST00000498223 ATF3P18847 181 aa16.05■□□□□ 0.16
CTTN-208ENST00000498223 RGPD8O14715 1765 aaPredicted RBP16.05■□□□□ 0.16
CTTN-208ENST00000498223 ADGRL3Q9HAR2 1447 aa16.04■□□□□ 0.16
CTTN-208ENST00000498223 CADPS2Q86UW7 1296 aa16.04■□□□□ 0.16
CTTN-208ENST00000498223 C19orf44Q9H6X5 657 aa16.04■□□□□ 0.16
CTTN-208ENST00000498223 FMN2Q9NZ56 1722 aa16.02■□□□□ 0.15
CTTN-208ENST00000498223 ADGRB2O60241 1585 aa16.01■□□□□ 0.15
CTTN-208ENST00000498223 EVC2Q86UK5 1308 aa16.01■□□□□ 0.15
CTTN-208ENST00000498223 NUTM2FA1L443 756 aa16.01■□□□□ 0.15
CTTN-208ENST00000498223 CDC42BPGQ6DT37 1551 aa16■□□□□ 0.15
CTTN-208ENST00000498223 SLC24A1O60721 1099 aa16■□□□□ 0.15
CTTN-208ENST00000498223 SRPK2P78362 688 aaKnown RBP16■□□□□ 0.15
CTTN-208ENST00000498223 WASLO00401 505 aaPredicted RBP15.99■□□□□ 0.15
CTTN-208ENST00000498223 TMF1P82094 1093 aa15.99■□□□□ 0.15
CTTN-208ENST00000498223 POLR3GLQ9BT43 218 aa15.99■□□□□ 0.15
CTTN-208ENST00000498223 CDK19Q9BWU1 502 aa15.99■□□□□ 0.15
CTTN-208ENST00000498223 RGS17Q9UGC6 210 aaPredicted RBP15.99■□□□□ 0.15
CTTN-208ENST00000498223 DCCP43146 1447 aa15.99■□□□□ 0.15
CTTN-208ENST00000498223 JCADQ9P266 1359 aa15.99■□□□□ 0.15
CTTN-208ENST00000498223 ITSN1Q15811 1721 aa15.98■□□□□ 0.15
CTTN-208ENST00000498223 TESK2Q96S53 571 aa15.97■□□□□ 0.15
CTTN-208ENST00000498223 TULP4Q9NRJ4 1543 aa15.97■□□□□ 0.15
CTTN-208ENST00000498223 SBNO2Q9Y2G9 1366 aa15.97■□□□□ 0.15
CTTN-208ENST00000498223 CABP2Q9NPB3 220 aa15.96■□□□□ 0.15
CTTN-208ENST00000498223 PHLPP1O60346 1717 aa15.94■□□□□ 0.14
CTTN-208ENST00000498223 CDCA8Q53HL2 280 aa15.94■□□□□ 0.14
CTTN-208ENST00000498223 COL16A1Q07092 1604 aaPredicted RBP15.94■□□□□ 0.14
CTTN-208ENST00000498223 AHDC1Q5TGY3 1603 aaPredicted RBP15.94■□□□□ 0.14
CTTN-208ENST00000498223 BRINP3Q76B58 766 aa15.93■□□□□ 0.14
CTTN-208ENST00000498223 USP32Q8NFA0 1604 aa15.93■□□□□ 0.14
CTTN-208ENST00000498223 ESCO1Q5FWF5 840 aa15.92■□□□□ 0.14
CTTN-208ENST00000498223 NUDT16Q96DE0 195 aaKnown RBP15.92■□□□□ 0.14
CTTN-208ENST00000498223 MST1RQ04912 1400 aa15.92■□□□□ 0.14
CTTN-208ENST00000498223 SPATA31A6Q5VVP1 1343 aa15.92■□□□□ 0.14
CTTN-208ENST00000498223 ANKARQ7Z5J8 1434 aa15.91■□□□□ 0.14
CTTN-208ENST00000498223 C1orf167Q5SNV9 1468 aa15.91■□□□□ 0.14
CTTN-208ENST00000498223 POTEAQ6S8J7 498 aa15.9■□□□□ 0.14
CTTN-208ENST00000498223 TMC1Q8TDI8 760 aa15.9■□□□□ 0.14
CTTN-208ENST00000498223 KIF1AQ12756 1690 aa15.89■□□□□ 0.13
CTTN-208ENST00000498223 TOPAZ1Q8N9V7 1692 aa15.89■□□□□ 0.13
CTTN-208ENST00000498223 ATAD2Q6PL18 1390 aa15.89■□□□□ 0.13
CTTN-208ENST00000498223 PRR36Q9H6K5 1346 aa15.89■□□□□ 0.13
CTTN-208ENST00000498223 PMFBP1Q8TBY8 1022 aa15.88■□□□□ 0.13
CTTN-208ENST00000498223 ORAI2Q96SN7 254 aa15.88■□□□□ 0.13
CTTN-208ENST00000498223 CCDC61Q9Y6R9 512 aa15.88■□□□□ 0.13
CTTN-208ENST00000498223 ATP7BP35670 1465 aa15.88■□□□□ 0.13
CTTN-208ENST00000498223 PPIP5K1Q6PFW1 1433 aa15.87■□□□□ 0.13
CTTN-208ENST00000498223 NGDNQ8NEJ9 315 aaKnown RBP15.87■□□□□ 0.13
CTTN-208ENST00000498223 PHF8Q9UPP1 1060 aa15.87■□□□□ 0.13
CTTN-208ENST00000498223 C11orf95C9JLR9 678 aaPredicted RBP15.86■□□□□ 0.13
CTTN-208ENST00000498223 PUS7Q96PZ0 661 aaKnown RBP15.86■□□□□ 0.13
CTTN-208ENST00000498223 CABP1Q9NZU7 370 aa15.86■□□□□ 0.13
CTTN-208ENST00000498223 LRP6O75581 1613 aa15.86■□□□□ 0.13
CTTN-208ENST00000498223 AKAP12Q02952 1782 aa15.85■□□□□ 0.13
CTTN-208ENST00000498223 KIF7Q2M1P5 1343 aa15.85■□□□□ 0.13
CTTN-208ENST00000498223 MYOM1P52179 1685 aa15.85■□□□□ 0.13
CTTN-208ENST00000498223 MEX3CQ5U5Q3 659 aaKnown RBP15.84■□□□□ 0.13
CTTN-208ENST00000498223 SHPRHQ149N8 1683 aa15.83■□□□□ 0.13
CTTN-208ENST00000498223 ZNF316A6NFI3 1004 aaPredicted RBP15.83■□□□□ 0.12
CTTN-208ENST00000498223 PSME1Q06323 249 aa15.83■□□□□ 0.12
CTTN-208ENST00000498223 SLC12A5Q9H2X9 1139 aa15.83■□□□□ 0.12
CTTN-208ENST00000498223 CCDC7Q96M83 1385 aa15.83■□□□□ 0.12
CTTN-208ENST00000498223 FOXO3O43524 673 aa15.82■□□□□ 0.12
CTTN-208ENST00000498223 HDGFL2Q7Z4V5 671 aaPredicted RBP15.82■□□□□ 0.12
CTTN-208ENST00000498223 LRRC59Q96AG4 307 aaKnown RBP15.82■□□□□ 0.12
CTTN-208ENST00000498223 ACEP12821 1306 aa15.82■□□□□ 0.12
CTTN-208ENST00000498223 NHSL1Q5SYE7 1610 aa15.82■□□□□ 0.12
CTTN-208ENST00000498223 PLEKHG3A1L390 1219 aa15.81■□□□□ 0.12
CTTN-208ENST00000498223 WASHC2AQ641Q2 1341 aa15.81■□□□□ 0.12
CTTN-208ENST00000498223 ZNF772Q68DY9 489 aaPredicted RBP15.81■□□□□ 0.12
CTTN-208ENST00000498223 DDX17Q92841 729 aaKnown RBP15.81■□□□□ 0.12
CTTN-208ENST00000498223 TERF2IPQ9NYB0 399 aa15.81■□□□□ 0.12
CTTN-208ENST00000498223 NINLQ9Y2I6 1382 aa15.81■□□□□ 0.12
CTTN-208ENST00000498223 NPHP3Q7Z494 1330 aa15.8■□□□□ 0.12
CTTN-208ENST00000498223 XPCQ01831 940 aaPredicted RBP15.8■□□□□ 0.12
CTTN-208ENST00000498223 MON2Q7Z3U7 1717 aa15.8■□□□□ 0.12
CTTN-208ENST00000498223 KRT28Q7Z3Y7 464 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms