RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 NGEFQ8N5V2 710 aa25.59■■□□□ 1.69
NKX2-1-202ENST00000498187 BCAR3O75815 825 aa25.58■■□□□ 1.69
NKX2-1-202ENST00000498187 FRMPD1Q5SYB0 1578 aa25.58■■□□□ 1.69
NKX2-1-202ENST00000498187 C14orf93Q9H972 538 aaKnown RBP25.57■■□□□ 1.68
NKX2-1-202ENST00000498187 GGT6Q6P531 493 aa25.56■■□□□ 1.68
NKX2-1-202ENST00000498187 ADGRB1O14514 1584 aa25.56■■□□□ 1.68
NKX2-1-202ENST00000498187 SHPRHQ149N8 1683 aa25.55■■□□□ 1.68
NKX2-1-202ENST00000498187 MORC1Q86VD1 984 aa25.54■■□□□ 1.68
NKX2-1-202ENST00000498187 SLC12A5Q9H2X9 1139 aa25.54■■□□□ 1.68
NKX2-1-202ENST00000498187 TMEM132EQ6IEE7 984 aa25.53■■□□□ 1.68
NKX2-1-202ENST00000498187 C8orf34Q49A92 452 aa25.52■■□□□ 1.68
NKX2-1-202ENST00000498187 WWC1Q8IX03 1113 aa25.52■■□□□ 1.68
NKX2-1-202ENST00000498187 IL27Q8NEV9 243 aa25.52■■□□□ 1.68
NKX2-1-202ENST00000498187 TNNT2P45379 298 aaPredicted RBP25.51■■□□□ 1.67
NKX2-1-202ENST00000498187 NFKBIBQ15653 356 aa25.51■■□□□ 1.67
NKX2-1-202ENST00000498187 GSE1Q14687 1217 aa25.49■■□□□ 1.67
NKX2-1-202ENST00000498187 ABCC3O15438 1527 aa25.49■■□□□ 1.67
NKX2-1-202ENST00000498187 RPGRIP1LQ68CZ1 1315 aa25.49■■□□□ 1.67
NKX2-1-202ENST00000498187 RGS3P49796 1198 aa25.48■■□□□ 1.67
NKX2-1-202ENST00000498187 USP32Q8NFA0 1604 aa25.48■■□□□ 1.67
NKX2-1-202ENST00000498187 SLC4A3P48751 1232 aa25.46■■□□□ 1.67
NKX2-1-202ENST00000498187 CAMSAP1Q5T5Y3 1602 aa25.45■■□□□ 1.67
NKX2-1-202ENST00000498187 GLI2P10070 1586 aa25.45■■□□□ 1.66
NKX2-1-202ENST00000498187 RUNDC1Q96C34 613 aa25.45■■□□□ 1.66
NKX2-1-202ENST00000498187 NEUROD2Q15784 382 aa25.45■■□□□ 1.66
NKX2-1-202ENST00000498187 SIGLEC1Q9BZZ2 1709 aa25.44■■□□□ 1.66
NKX2-1-202ENST00000498187 PDE3AQ14432 1141 aa25.44■■□□□ 1.66
NKX2-1-202ENST00000498187 IQSEC2Q5JU85 1478 aa25.44■■□□□ 1.66
NKX2-1-202ENST00000498187 CGNL1Q0VF96 1302 aa25.43■■□□□ 1.66
NKX2-1-202ENST00000498187 RRP7AQ9Y3A4 280 aaKnown RBP25.43■■□□□ 1.66
NKX2-1-202ENST00000498187 NINLQ9Y2I6 1382 aa25.43■■□□□ 1.66
NKX2-1-202ENST00000498187 FAM69CQ0P6D2 419 aa25.43■■□□□ 1.66
NKX2-1-202ENST00000498187 CANXP27824 592 aaKnown RBP25.42■■□□□ 1.66
NKX2-1-202ENST00000498187 ARHGEF28Q8N1W1 1705 aaKnown RBP25.41■■□□□ 1.66
NKX2-1-202ENST00000498187 TCP11L2Q8N4U5 519 aa25.41■■□□□ 1.66
NKX2-1-202ENST00000498187 IGHDP01880 384 aa25.41■■□□□ 1.66
NKX2-1-202ENST00000498187 MTHFSP49914 203 aa25.41■■□□□ 1.66
NKX2-1-202ENST00000498187 NUTM2DQ5VT03 806 aaPredicted RBP25.41■■□□□ 1.66
NKX2-1-202ENST00000498187 DIP2CQ9Y2E4 1556 aa25.41■■□□□ 1.66
NKX2-1-202ENST00000498187 RICTORQ6R327 1708 aa25.4■■□□□ 1.66
NKX2-1-202ENST00000498187 PIK3C2BO00750 1634 aa25.4■■□□□ 1.66
NKX2-1-202ENST00000498187 PANK1Q8TE04 598 aa25.4■■□□□ 1.66
NKX2-1-202ENST00000498187 TULP4Q9NRJ4 1543 aa25.39■■□□□ 1.66
NKX2-1-202ENST00000498187 NEXMIFQ5QGS0 1516 aa25.39■■□□□ 1.65
NKX2-1-202ENST00000498187 COG6Q9Y2V7 657 aa25.38■■□□□ 1.65
NKX2-1-202ENST00000498187 EVC2Q86UK5 1308 aa25.38■■□□□ 1.65
NKX2-1-202ENST00000498187 CLUAP1Q96AJ1 413 aa25.37■■□□□ 1.65
NKX2-1-202ENST00000498187 CFAP53Q96M91 514 aa25.37■■□□□ 1.65
NKX2-1-202ENST00000498187 PHF23Q9BUL5 403 aaPredicted RBP25.37■■□□□ 1.65
NKX2-1-202ENST00000498187 DIP2BQ9P265 1576 aa25.37■■□□□ 1.65
NKX2-1-202ENST00000498187 VGFO15240 615 aaPredicted RBP25.36■■□□□ 1.65
NKX2-1-202ENST00000498187 DNAJC5Q9H3Z4 198 aa25.36■■□□□ 1.65
NKX2-1-202ENST00000498187 ANKRD36BQ8N2N9 1353 aa25.36■■□□□ 1.65
NKX2-1-202ENST00000498187 FRAT1Q92837 279 aaPredicted RBP25.36■■□□□ 1.65
NKX2-1-202ENST00000498187 PUS7Q96PZ0 661 aaKnown RBP25.36■■□□□ 1.65
NKX2-1-202ENST00000498187 ARHGAP31Q2M1Z3 1444 aa25.35■■□□□ 1.65
NKX2-1-202ENST00000498187 RTN4Q9NQC3 1192 aaKnown RBP25.35■■□□□ 1.65
NKX2-1-202ENST00000498187 RARSP54136 660 aaKnown RBP25.35■■□□□ 1.65
NKX2-1-202ENST00000498187 WDR63Q8IWG1 891 aa25.35■■□□□ 1.65
NKX2-1-202ENST00000498187 RAPGEF3O95398 923 aa25.34■■□□□ 1.65
NKX2-1-202ENST00000498187 VIRMAQ69YN4 1812 aaKnown RBP25.34■■□□□ 1.65
NKX2-1-202ENST00000498187 NSD2O96028 1365 aa25.33■■□□□ 1.65
NKX2-1-202ENST00000498187 CABP2Q9NPB3 220 aa25.32■■□□□ 1.64
NKX2-1-202ENST00000498187 CCDC27Q2M243 656 aa25.31■■□□□ 1.64
NKX2-1-202ENST00000498187 MAPK8IP3Q9UPT6 1336 aa25.29■■□□□ 1.64
NKX2-1-202ENST00000498187 SAFB2Q14151 953 aaKnown RBP eCLIP25.29■■□□□ 1.64
NKX2-1-202ENST00000498187 TSPOAP1O95153 1857 aa25.28■■□□□ 1.64
NKX2-1-202ENST00000498187 U2AF1L5P0DN76 240 aaPredicted RBP25.28■■□□□ 1.64
NKX2-1-202ENST00000498187 U2AF1Q01081 240 aaKnown RBP eCLIP25.28■■□□□ 1.64
NKX2-1-202ENST00000498187 ANO8Q9HCE9 1232 aaPredicted RBP25.28■■□□□ 1.64
NKX2-1-202ENST00000498187 IDI1Q13907 227 aa25.26■■□□□ 1.63
NKX2-1-202ENST00000498187 BCL2L13Q9BXK5 485 aa25.26■■□□□ 1.63
NKX2-1-202ENST00000498187 BRPF3Q9ULD4 1205 aa25.26■■□□□ 1.63
NKX2-1-202ENST00000498187 TNNQ9UQP3 1299 aa25.26■■□□□ 1.63
NKX2-1-202ENST00000498187 FRAT2O75474 233 aaPredicted RBP25.26■■□□□ 1.63
NKX2-1-202ENST00000498187 RLBP1P12271 317 aa25.26■■□□□ 1.63
NKX2-1-202ENST00000498187 ADGRB2O60241 1585 aa25.25■■□□□ 1.63
NKX2-1-202ENST00000498187 MYH16Q9H6N6 1097 aa25.24■■□□□ 1.63
NKX2-1-202ENST00000498187 A0A1W2PP64 1363 aa25.24■■□□□ 1.63
NKX2-1-202ENST00000498187 NCBP3Q53F19 620 aaKnown RBP25.24■■□□□ 1.63
NKX2-1-202ENST00000498187 KIF13AQ9H1H9 1805 aa25.24■■□□□ 1.63
NKX2-1-202ENST00000498187 MYO5BQ9ULV0 1848 aa25.24■■□□□ 1.63
NKX2-1-202ENST00000498187 AAMPQ13685 434 aa25.23■■□□□ 1.63
NKX2-1-202ENST00000498187 SENP3Q9H4L4 574 aaPredicted RBP25.23■■□□□ 1.63
NKX2-1-202ENST00000498187 STK26Q9P289 416 aa25.23■■□□□ 1.63
NKX2-1-202ENST00000498187 PMFBP1Q8TBY8 1022 aa25.23■■□□□ 1.63
NKX2-1-202ENST00000498187 ZFYVE9O95405 1425 aa25.22■■□□□ 1.63
NKX2-1-202ENST00000498187 ABCC11Q96J66 1382 aa25.22■■□□□ 1.63
NKX2-1-202ENST00000498187 SRPK2P78362 688 aaKnown RBP25.21■■□□□ 1.63
NKX2-1-202ENST00000498187 PCDHB15Q9Y5E8 787 aa25.21■■□□□ 1.63
NKX2-1-202ENST00000498187 USP19O94966 1318 aa25.21■■□□□ 1.63
NKX2-1-202ENST00000498187 BECN1Q14457 450 aa25.2■■□□□ 1.63
NKX2-1-202ENST00000498187 YEATS2Q9ULM3 1422 aa25.2■■□□□ 1.62
NKX2-1-202ENST00000498187 SLC52A1Q9NWF4 448 aa25.2■■□□□ 1.62
NKX2-1-202ENST00000498187 GGNBP2Q9H3C7 697 aa25.18■■□□□ 1.62
NKX2-1-202ENST00000498187 PREX1Q8TCU6 1659 aa25.17■■□□□ 1.62
NKX2-1-202ENST00000498187 PTPRMP28827 1452 aa25.17■■□□□ 1.62
NKX2-1-202ENST00000498187 TMEM131LA2VDJ0 1609 aa25.16■■□□□ 1.62
NKX2-1-202ENST00000498187 SEC24BO95487 1268 aa25.16■■□□□ 1.62
NKX2-1-202ENST00000498187 REREQ9P2R6 1566 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms